|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851899.1:83974..84961+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_365787-T1 ID=M747DRAFT_365787-T1|Name=M747DRAFT_365787-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=988bp|location=Sequence derived from alignment at KZ851899.1:83974..84961+ (Aspergillus niger ATCC 13496)
ATGGACTTTCAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATGTCGA
CTTCTATCCTTACACACCCTCTGCGACAGCCGGGTACGCCTTCATGGCCA
TTTTCGGCATTGCAACCCTTGTCCACTTCGTCATGATGTTTCCTTACCGC
GCCGCATACTTTATCCCGCTTGTGATCGGGGGAATATGTGCGTCGAGCCC
TTCTTTACCCTGTCCACTGCCCCAAGCCCTACCATGGCATCCATCCACTC
ATTCATCCATCCATCTAACAGAATCTCCCATCAGGTGAAACCTTTGGCTA
CTATGGCCGTGCCTGGTCTCACCAAGGCCGGACCCTCATCGGCCCCTGGG
CCTTGCAAGAGATGCTCATCCTCTGCGCGCCGCCCTTCATCGCTGCCACC
ATCTACATGATCCTCGGACGCATGATCGTCGCCTTCGCCGCCGAGCACCA
CTCCGTTATCCGACCCAAATGGCTCACCAAGATCTTCGTCCTCAACGACG
TCATCTGCTTCCTGACGCAGATCGCCGGTGCCGGGGTGCAAGTCACCGGT
GACGAGCACCTCATGAAAACGGGTATCAAAGCCGTCCTGGCAGGATTGAT
TTTCTCTCTGGTGATCTTCCTATTGTTTGTGTGGGTGGCCGTCGTATTTC
ACCTGCGGTTGAGTCGCGAGCCGACGTGGGTGGTCAATGAGAATCCGTGG
TTGACGGAAGGATGGAAGCGGTATATGTGGGCGTTGTATGTGGCGTGTGG
CACGTTGATGGTGAGAAACTTGGTCCGGACGGTGCAGTTTGGGGCCAACG
AGACATCGCCCTTGAATACCGAGGAGGTGTATATTTATGTGTTTGATGCC
GCGTTGATGTTTGCTTCTATGGCCGTGTTGGCGGTTTATCATCCGGGCAC
GTTGATTAAGAAGGCGAGGAGGACCAAGGAGGCGGCGGAGTATTGTCAGC
CCATGACAGACATTGGGGATGAGGGGAGGGGGGCTTAA back to topCoding sequence (CDS) from alignment at KZ851899.1:83974..84961+ >M747DRAFT_365787-T1 ID=M747DRAFT_365787-T1|Name=M747DRAFT_365787-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1782bp|location=Sequence derived from alignment at KZ851899.1:83974..84961+ (Aspergillus niger ATCC 13496)
ATGGACTTTCAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATGTCGA
CTTCTATCCTTACACACCCTCTGCGACAGCCGGGTACGCCTTCATGGCCA
TTTTCGGCATTGCAACCCTTGTCCACTTCGTCATGATGTTTCCTTACCGC
GCCGCATACTTTATCCCGCTTGTGATCGGGGGAATATGTGAAACCTTTGG
CTACTATGGCCGTGCCTGGTCTCACCAAGGCCGGACCCTCATCGGCCCCT
GGGCCTTGCAAGAGATGCTCATCCTCTGCGCGCCGCCCTTCATCGCTGCC
ACCATCTACATGATCCTCGGACGCATGATCGTCGCCTTCGCCGCCGAGCA
CCACTCCGTTATCCGACCCAAATGGCTCACCAAGATCTTCGTCCTCAACG
ACGTCATCTGCTTCCTGACGCAGATCGCCGGTGCCGGGGTGCAAGTCACC
GGTGACGAGCACCTCATGAAAACGGGTATCAAAGCCGTCCTGGCAGGATT
GATTTTCTCTCTGGTGATCTTCCTATTGTTTGTGTGGGTGGCCGTCGTAT
TTCACCTGCGGTTGAGTCGCGAGCCGACGTGGGTGGTCAATGAGAATCCG
TGGTTGACGGAAGGATGGAAGCGGTATATGTGGGCGTTGTATGTGGCGTG
TGGCACGTTGATGGTGAGAAACTTGGTCCGGACGGTGCAGTTTGGGGCCA
ACGAGACATCGCCCTTGAATACCGAGGAGGTGTATATTTATGTGTTTGAT
GCCGCGTTGATGTTTGCTTCTATGGCCGTGTTGGCGGTTTATCATCCGGG
CACGTTGATTAAGAAGGCGAGGAGGACCAAGGAGGCGGCGGAGTATTGTC
AGCCCATGACAGACATTGGGGATGAGGGGAGGGGGGCTTAAATGGACTTT
CAATTCCACCCCGGTGTCAATGGCTCCGACCCTTATGTCGACTTCTATCC
TTACACACCCTCTGCGACAGCCGGGTACGCCTTCATGGCCATTTTCGGCA
TTGCAACCCTTGTCCACTTCGTCATGATGTTTCCTTACCGCGCCGCATAC
TTTATCCCGCTTGTGATCGGGGGAATATGTGAAACCTTTGGCTACTATGG
CCGTGCCTGGTCTCACCAAGGCCGGACCCTCATCGGCCCCTGGGCCTTGC
AAGAGATGCTCATCCTCTGCGCGCCGCCCTTCATCGCTGCCACCATCTAC
ATGATCCTCGGACGCATGATCGTCGCCTTCGCCGCCGAGCACCACTCCGT
TATCCGACCCAAATGGCTCACCAAGATCTTCGTCCTCAACGACGTCATCT
GCTTCCTGACGCAGATCGCCGGTGCCGGGGTGCAAGTCACCGGTGACGAG
CACCTCATGAAAACGGGTATCAAAGCCGTCCTGGCAGGATTGATTTTCTC
TCTGGTGATCTTCCTATTGTTTGTGTGGGTGGCCGTCGTATTTCACCTGC
GGTTGAGTCGCGAGCCGACGTGGGTGGTCAATGAGAATCCGTGGTTGACG
GAAGGATGGAAGCGGTATATGTGGGCGTTGTATGTGGCGTGTGGCACGTT
GATGGTGAGAAACTTGGTCCGGACGGTGCAGTTTGGGGCCAACGAGACAT
CGCCCTTGAATACCGAGGAGGTGTATATTTATGTGTTTGATGCCGCGTTG
ATGTTTGCTTCTATGGCCGTGTTGGCGGTTTATCATCCGGGCACGTTGAT
TAAGAAGGCGAGGAGGACCAAGGAGGCGGCGGAGTATTGTCAGCCCATGA
CAGACATTGGGGATGAGGGGAGGGGGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1-domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851899.1 | supercontig | KZ851899.1:83974..84961 + |
|
