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M747DRAFT_366854-T1, M747DRAFT_366854-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366854-T1
Unique NameM747DRAFT_366854-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:374122..375950+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366854-T1 ID=M747DRAFT_366854-T1|Name=M747DRAFT_366854-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1829bp|location=Sequence derived from alignment at KZ851901.1:374122..375950+ (Aspergillus niger ATCC 13496)
GAGCGGGCATCAATCTCGCCACCACTCTGCCTTGATCGTGTTCGAGTGAT
TCCTGCGGCTCACCATCTTAGCTTGGACTGTGAGAAACAATGGCGTACGG
CAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAG
GTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGGTTAGTTCG
CAGTTGAACAAGGCCTCTTCGCTTACAATATCTAACGCTGCTATTAGCCG
GACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGC
CGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAAT
GGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCG
ATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATTGTACC
TACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGA
TGATGGAGGTGCGTATAAACCCGCTTCTTATTTGAAACAGATGAGCTCAG
TCGGACCTAACACGGCATATGGAAACATAGTGTGGTGTCAATGATTTTAT
GTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTTAAGATATTCT
CCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAACGCCCGTTATT
GATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCATTGACACCCT
GTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAAATGCGCCGGA
CTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACGACGGAATGAC
GAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAGAGCGAGTGGC
CGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGGCAAGCGCAGC
TTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGAAGTCGAGAAA
CTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAG
TGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATCGACGCGATGG
AGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTTTACGGTCGTT
AGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATATATCCGTGGA
ACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAG
CCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCAGACCGAGAAG
TTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCGAGGCTTTACG
GAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGCATGGAGGAAC
TCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGAAAAGCAACGC
GACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGAAGAAGGTAAA
TGTCTCTTGTTTCCTTCGGCTTTGCATGCTTTACTAATTTCCATCCAGAT
GGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTCACGATG
AGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGACATGGAG
AAATGCCTATAAATTTGGAAATTCATTATGGTGTCAAATCGGGAGTTTTA
GGACTGGTTTAAGGATACCCGGTTGATTATGGGGGTTTATATTGTCTCAT
AGCACATATTTTGCTCTATTGCTGTCCTTTCAAATCGTCAAACGTCTATG
TCTGTAGTGTCCATAATCGGAGCCTCATC
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Coding sequence (CDS) from alignment at KZ851901.1:374122..375950+

>M747DRAFT_366854-T1 ID=M747DRAFT_366854-T1|Name=M747DRAFT_366854-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5568bp|location=Sequence derived from alignment at KZ851901.1:374122..375950+ (Aspergillus niger ATCC 13496)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTC
ACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTT
TGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGC
CAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATT
GTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCG
GTTGATGATGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCA
AGCCAACGCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTT
GTCAGATTCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAA
GGGCGAGAAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGG
AGATGGAGCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAG
GCACAGGTTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCT
ACTCGAATTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAG
CCAAGGCGGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAA
AAGGTCGTTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTAT
GGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATC
TCCTTCGTGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCT
CTGCAAACATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGC
TTGTGTGCGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATG
ATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGG
AATAATGTCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCT
GGCACGATGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAA
AAGCCGAAGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAA
CAACTCCGGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAG
AATCCGGATCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACA
TTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCA
CACATCAAACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTA
CGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATA
GAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGAC
AAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGC
CGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGT
TTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATG
CGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTAC
CGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGA
TGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACG
CATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATT
CCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGA
AGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAG
CAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGT
TAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAAT
TGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCG
GATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGT
TCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCC
CCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGT
GAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAAC
ATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGC
GCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAG
TCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGT
CAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGAT
GGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAA
GTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCG
GGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGA
TCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGC
GAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAA
ACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCC
GAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGC
AAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAAT
CGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGA
TCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAG
CTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGC
GGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGC
GCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGT
GGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCG
ACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAAT
CTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAG
TCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCT
CGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGA
AGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGA
AACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGC
AAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGC
GACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCT
CTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGC
GCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGG
ACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTC
GAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGC
CTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAG
TGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAG
AGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCA
GGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGC
GAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAA
ACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCA
AAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATA
TCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCCGAATGAGC
CAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGA
GGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAATCGCAGGAT
GCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCCA
AACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTAT
GAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACG
ATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCTC
ATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGTGGTGTCAA
TGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTTA
AGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAACG
CCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCAT
TGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAAA
TGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACGA
CGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAGA
GCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGGC
AAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGAA
GTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGTC
GTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATCG
ACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTTT
ACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATAT
ATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGGA
ATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCAG
ACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCGA
GGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGCA
TGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGAA
AAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGAA
GAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTC
ACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGAC
ATGGAGAAATGCCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
GO:0031262Ndc80 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUF2M747DRAFT_366854Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366854-T1M747DRAFT_366854-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366854-T1.utr5p1M747DRAFT_366854-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366854-T1.exon1M747DRAFT_366854-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_366854-T1.exon2M747DRAFT_366854-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_366854-T1.exon3M747DRAFT_366854-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_366854-T1.exon4M747DRAFT_366854-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366854-T1.cdsM747DRAFT_366854-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366854-T1.utr3p1M747DRAFT_366854-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038275
DBxrefInterPro:IPR005549
DBxrefInterPro:IPR041112
DBxrefPFAM:PF03800
DBxrefPFAM:PF18595
Productkinetochore-associated Ndc80 complex subunit nuf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:374122..375950 +
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