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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851902.1:269990..272208- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_367171-T1 ID=M747DRAFT_367171-T1|Name=M747DRAFT_367171-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2219bp|location=Sequence derived from alignment at KZ851902.1:269990..272208- (Aspergillus niger ATCC 13496)
ATCCTTCGTCTCTCTTTCTGTCCTTCAACAATTTCCATTCGGTCTGCTTC
AAGCAAGGTACAATTGTTTGGTGACTCGGACTAACGGTCAGCCGGCTTAT
TTCCTGAAAGGTGCGACTGCCAGTCTATTGGCTGGTGTTTCTCCAGGGTC
CATCTACTACCTAATATCCGGCTGGTGCACGTTGCCGGAATATACATCTA
TGCCGGCTTCACCTAACCAGAATCAATACTAGTTCCACGTACTAAAGAGA
ACAAACCAACAGCGGTCGTTTCATATAACTCTAGATAGCCTAGAATAACT
ATCGTTCGTTACAAATCTGCTCCTAACCCATGACAGTATCCAATACTGCA
ATCATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGAGATG
CAGACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGCAAGC
GTCGTCGGAAGCGGTGTGATGAAGCGAAACCCTGGTATGATGGAGTCCGT
CCCTGGTACTAGGTTACACTAGGCACTAACTGCTTGATTACAATAGCTGT
CATAGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTG
GGCAGAGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCAC
CAAAACGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGT
GGCCCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAG
TCTATCAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTAT
ACTCTTGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTACAATA
CCTAACATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAG
TAGGTACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATC
ACACCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAAT
CCTCTTCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGAT
GAAGGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGG
ACAAACAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTG
AGTGGGCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGA
TGAGGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCG
GAAGTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATA
ATGGCTCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTT
AAGCGGCTTGTAAGACCTTCTCTACAACCAAGCCGCCTTGAACGAGAGCT
AACCCCACCATAGCTACGTCTACGCCTATAACATGGCTAGAATTAACAAC
CGCAAACACATCAACTATGACCTTAACATTGGCAACGTCAAAATCTCCAA
GCTCGACATCTACATCGGCTACGCAGAAGACCTCATCAAGATCTGTGCCC
GAATAGCCGACCTCCCCACACTGTCCGAAGACCCTGTAGCTTTGGACCTA
GAAGTCCACTCGATGTAAGTAAACCCTCAACAACATACACAACCAAAGCT
AACAAACAACCACACGCAGAGACACATCCCTCCGCGACTGGGCCCCCACC
AACACCACATACATCATCCCACGAGGCATAACTGAATCAAACCTCGTCCG
TCTCCGCATGGTAGCCAACTGCTTCCGCGACGCCGCATACCTCTATCTTC
ATTCTACCCTGGAGAGACTGAACCAGGGAATGGCGTCACCGCCATCATTA
CCACTTGCTACTCCGTTACCATTGGCACTACAAGCGTCATCCAAATTAGT
ACCGGCGCCATCACCATCCATCTCCCTCCCCCGATCAACCGCACTACACC
AACTTCTAAGCAGAATCAGGGCTTTCCCACTCGACGAACACTGTGAATAC
TCTGCCCTTACATTCCCACTCTTCATCGCCGGCTGCGAGAGCAGGGATCC
TGCAGACCAGGAGCTCATTATACAGTCATTGAGTAAGTTAGAGGCGAACT
TTGGCATCGGGAATGTAAGAAGAGCAAAGGAGATGTTGAGTATCCTGTGG
GCTGGAGAAGGGGATGTGCATTGGTTGGACATGTTGGAGCGGTTACAGTG
GGATTTGATTCTCGCTTAG back to topCoding sequence (CDS) from alignment at KZ851902.1:269990..272208- >M747DRAFT_367171-T1 ID=M747DRAFT_367171-T1|Name=M747DRAFT_367171-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6876bp|location=Sequence derived from alignment at KZ851902.1:269990..272208- (Aspergillus niger ATCC 13496)
AGACACATCCCTCCGCGACTGGGCCCCCACCAACACCACATACATCATCC
CACGAGGCATAACTGAATCAAACCTCGTCCGTCTCCGCATGGTAGCCAAC
TGCTTCCGCGACGCCGCATACCTCTATCTTCATTCTACCCTGGAGAGACT
GAACCAGGGAATGGCGTCACCGCCATCATTACCACTTGCTACTCCGTTAC
CATTGGCACTACAAGCGTCATCCAAATTAGTACCGGCGCCATCACCATCC
ATCTCCCTCCCCCGATCAACCGCACTACACCAACTTCTAAGCAGAATCAG
GGCTTTCCCACTCGACGAACACTGTGAATACTCTGCCCTTACATTCCCAC
TCTTCATCGCCGGCTGCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATT
ATACAGTCATTGAGTAAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAG
AAGAGCAAAGGAGATGTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGC
ATTGGTTGGACATGTTGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAG
CTACGTCTACGCCTATAACATGGCTAGAATTAACAACCGCAAACACATCA
ACTATGACCTTAACATTGGCAACGTCAAAATCTCCAAGCTCGACATCTAC
ATCGGCTACGCAGAAGACCTCATCAAGATCTGTGCCCGAATAGCCGACCT
CCCCACACTGTCCGAAGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGA
TCTGTCATAGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCA
ATGTGGGCAGAGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAG
AGCACCAAAACGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCT
CGCGTGGCCCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCG
AGCAGTCTATCAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAG
TCTATACTCTTGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTA
CAATACCTAACATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATA
CCAAGTAGGTACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCA
GTATCACACCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCG
ACAATCCTCTTCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTT
CTGATGAAGGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTC
CCGGGACAAACAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAA
CACTGAGTGGGCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTT
CCCGATGAGGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGT
ACGCGGAAGTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGC
TCATAATGGCTCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAA
TTCTTAAGCGGCTTATGACAGTATCCAATACTGCAATCATGGTGCAACAA
CCCTCTTCGGCTCAGACCCCGACGAGGCGGAGATGCAGACGAGAAGGCGC
CAAGTGGACACGGTCTGGCTGCTTGACATGCAAGCGTCGTCGGAAGCGGT
GTGATGAAGCGAAACCCTGAGACACATCCCTCCGCGACTGGGCCCCCACC
AACACCACATACATCATCCCACGAGGCATAACTGAATCAAACCTCGTCCG
TCTCCGCATGGTAGCCAACTGCTTCCGCGACGCCGCATACCTCTATCTTC
ATTCTACCCTGGAGAGACTGAACCAGGGAATGGCGTCACCGCCATCATTA
CCACTTGCTACTCCGTTACCATTGGCACTACAAGCGTCATCCAAATTAGT
ACCGGCGCCATCACCATCCATCTCCCTCCCCCGATCAACCGCACTACACC
AACTTCTAAGCAGAATCAGGGCTTTCCCACTCGACGAACACTGTGAATAC
TCTGCCCTTACATTCCCACTCTTCATCGCCGGCTGCGAGAGCAGGGATCC
TGCAGACCAGGAGCTCATTATACAGTCATTGAGTAAGTTAGAGGCGAACT
TTGGCATCGGGAATGTAAGAAGAGCAAAGGAGATGTTGAGTATCCTGTGG
GCTGGAGAAGGGGATGTGCATTGGTTGGACATGTTGGAGCGGTTACAGTG
GGATTTGATTCTCGCTTAGCTACGTCTACGCCTATAACATGGCTAGAATT
AACAACCGCAAACACATCAACTATGACCTTAACATTGGCAACGTCAAAAT
CTCCAAGCTCGACATCTACATCGGCTACGCAGAAGACCTCATCAAGATCT
GTGCCCGAATAGCCGACCTCCCCACACTGTCCGAAGACCCTGTAGCTTTG
GACCTAGAAGTCCACTCGATCTGTCATAGCTGCGCCAGATTGGGCTTGAA
ATGTGAGGGTTATGGCTCAATGTGGGCAGAGCCTTTAGATCCATCGGCAA
ATGTCTTCAATCAGTTCAGAGCACCAAAACGGCGCAGAGTTAGCACAGCA
TCTTCTTCAACGAGTTTCTCGCGTGGCCCGGAAGAAGAGCTCTGGCTGTA
CCCGAGCTCCCCAGTATCGAGCAGTCTATCAACAGCGCCAACAACTCCGG
CTGATTCTGACAACAACAGTCTATACTCTTGGAATAATGAAGACAATGAA
TATGGAGACATGCAGGTTACAATACCTAACATTGACGCCTGCGATACACT
CACCGTCGCTCCACCCATACCAAGTAGGTACTTTAGTCATCTGTCGCATC
ATGATACGCACTATCTCCAGTATCACACCGAGCTGGGCTCCAAGCTACTA
GCCAACCTTGAGAGTATCGACAATCCTCTTCGATCGTTTCTTATACCTCG
AGCCCTGTCATCGCCTCTTCTGATGAAGGCCCTGTGTGCGGTATCTGCAA
CGCATTTTGCAAATCGGTCCCGGGACAAACAGGAGGCCCAAACAGCCGCG
ACAGACTACTACGTTCGAACACTGAGTGGGCTGCAGTTGACAATTGCTAA
ATATTCACCGCGGAGTCTTCCCGATGAGGCCATTCTAGCAGTGGCCATGC
TTTGCAAGTACGAGATCGTACGCGGAAGTGTTCAGCAGTGGACCGTGCAT
CTGAACGCCCTGCAAGAGCTCATAATGGCTCGGGGTGGAGTTGATGCTCT
CAACGATGACATGAGAGAATTCTTAAGCGGCTTATGACAGTATCCAATAC
TGCAATCATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGA
GATGCAGACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGC
AAGCGTCGTCGGAAGCGGTGTGATGAAGCGAAACCCTGAGACACATCCCT
CCGCGACTGGGCCCCCACCAACACCACATACATCATCCCACGAGGCATAA
CTGAATCAAACCTCGTCCGTCTCCGCATGGTAGCCAACTGCTTCCGCGAC
GCCGCATACCTCTATCTTCATTCTACCCTGGAGAGACTGAACCAGGGAAT
GGCGTCACCGCCATCATTACCACTTGCTACTCCGTTACCATTGGCACTAC
AAGCGTCATCCAAATTAGTACCGGCGCCATCACCATCCATCTCCCTCCCC
CGATCAACCGCACTACACCAACTTCTAAGCAGAATCAGGGCTTTCCCACT
CGACGAACACTGTGAATACTCTGCCCTTACATTCCCACTCTTCATCGCCG
GCTGCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATTATACAGTCATTG
AGTAAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAGAAGAGCAAAGGA
GATGTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGCATTGGTTGGACA
TGTTGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAGCTACGTCTACGC
CTATAACATGGCTAGAATTAACAACCGCAAACACATCAACTATGACCTTA
ACATTGGCAACGTCAAAATCTCCAAGCTCGACATCTACATCGGCTACGCA
GAAGACCTCATCAAGATCTGTGCCCGAATAGCCGACCTCCCCACACTGTC
CGAAGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGATCTGTCATAGCT
GCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTGGGCAGAG
CCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCACCAAAACG
GCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGTGGCCCGG
AAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAGTCTATCA
ACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTATACTCTTG
GAATAATGAAGACAATGAATATGGAGACATGCAGGTTACAATACCTAACA
TTGACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAGTAGGTAC
TTTAGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATCACACCGA
GCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAATCCTCTTC
GATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGATGAAGGCC
CTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGGACAAACA
GGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTGAGTGGGC
TGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGATGAGGCC
ATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCGGAAGTGT
TCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATAATGGCTC
GGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTTAAGCGGC
TTATGACAGTATCCAATACTGCAATCATGGTGCAACAACCCTCTTCGGCT
CAGACCCCGACGAGGCGGAGATGCAGACGAGAAGGCGCCAAGTGGACACG
GTCTGGCTGCTTGACATGCAAGCGTCGTCGGAAGCGGTGTGATGAAGCGA
AACCCTGAGACACATCCCTCCGCGACTGGGCCCCCACCAACACCACATAC
ATCATCCCACGAGGCATAACTGAATCAAACCTCGTCCGTCTCCGCATGGT
AGCCAACTGCTTCCGCGACGCCGCATACCTCTATCTTCATTCTACCCTGG
AGAGACTGAACCAGGGAATGGCGTCACCGCCATCATTACCACTTGCTACT
CCGTTACCATTGGCACTACAAGCGTCATCCAAATTAGTACCGGCGCCATC
ACCATCCATCTCCCTCCCCCGATCAACCGCACTACACCAACTTCTAAGCA
GAATCAGGGCTTTCCCACTCGACGAACACTGTGAATACTCTGCCCTTACA
TTCCCACTCTTCATCGCCGGCTGCGAGAGCAGGGATCCTGCAGACCAGGA
GCTCATTATACAGTCATTGAGTAAGTTAGAGGCGAACTTTGGCATCGGGA
ATGTAAGAAGAGCAAAGGAGATGTTGAGTATCCTGTGGGCTGGAGAAGGG
GATGTGCATTGGTTGGACATGTTGGAGCGGTTACAGTGGGATTTGATTCT
CGCTTAGCTACGTCTACGCCTATAACATGGCTAGAATTAACAACCGCAAA
CACATCAACTATGACCTTAACATTGGCAACGTCAAAATCTCCAAGCTCGA
CATCTACATCGGCTACGCAGAAGACCTCATCAAGATCTGTGCCCGAATAG
CCGACCTCCCCACACTGTCCGAAGACCCTGTAGCTTTGGACCTAGAAGTC
CACTCGATCTGTCATAGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTA
TGGCTCAATGTGGGCAGAGCCTTTAGATCCATCGGCAAATGTCTTCAATC
AGTTCAGAGCACCAAAACGGCGCAGAGTTAGCACAGCATCTTCTTCAACG
AGTTTCTCGCGTGGCCCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCC
AGTATCGAGCAGTCTATCAACAGCGCCAACAACTCCGGCTGATTCTGACA
ACAACAGTCTATACTCTTGGAATAATGAAGACAATGAATATGGAGACATG
CAGGTTACAATACCTAACATTGACGCCTGCGATACACTCACCGTCGCTCC
ACCCATACCAAGTAGGTACTTTAGTCATCTGTCGCATCATGATACGCACT
ATCTCCAGTATCACACCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAG
AGTATCGACAATCCTCTTCGATCGTTTCTTATACCTCGAGCCCTGTCATC
GCCTCTTCTGATGAAGGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAA
ATCGGTCCCGGGACAAACAGGAGGCCCAAACAGCCGCGACAGACTACTAC
GTTCGAACACTGAGTGGGCTGCAGTTGACAATTGCTAAATATTCACCGCG
GAGTCTTCCCGATGAGGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACG
AGATCGTACGCGGAAGTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTG
CAAGAGCTCATAATGGCTCGGGGTGGAGTTGATGCTCTCAACGATGACAT
GAGAGAATTCTTAAGCGGCTTATGACAGTATCCAATACTGCAATCATGGT
GCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGAGATGCAGACGAG
AAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGCAAGCGTCGTCGG
AAGCGGTGTGATGAAGCGAAACCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851902.1 | supercontig | KZ851902.1:269990..272208 - |
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