You are here

Home

M747DRAFT_370302-T1, M747DRAFT_370302-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370302-T1
Unique NameM747DRAFT_370302-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:328335..329653-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370302-T1 ID=M747DRAFT_370302-T1|Name=M747DRAFT_370302-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1319bp|location=Sequence derived from alignment at KZ851914.1:328335..329653- (Aspergillus niger ATCC 13496)
TCTCAATCTTACTATCTACAAGTTTTAAGTCCCTCCGGTGTCAAAACCCG
CGGGTCCGAAATCCTTCCGTTCACACAGATACCTACATCCATTCTTATAA
AATACCACCCATCATGACCGACCCCGCCCTCCAAATCCCCGAAGTCATCC
AAACCGCCTCCATCAACCCGGCGCCGTCCCCGGAACACGACGTCAACCCG
CCCACCGCAGCCTCCGAGAAGCAGCCCATCGTGGAAGACGATGTCGCCTC
CGAAGCAGGCAGTATCCCCTCCGATGTCGTCGATCCTCACCGCATGATCA
AGCCCGTCTCGCGACGACACCATCTGCCCCCATTGCCCGATCTGCGCTTC
GAACAGAGCTATCTCGCCAGCTTGCGGGGAGCTGATACCTGGGGCCGAGT
AGCTTGGATTACCATCAGAGACCAGGTAGGACACCAGTCTGCCCCTGCAA
TACACTACTGGCACAAGTCAACTGGAAGCAAAAGAGTCCTCAAAACTGAC
ACGAATTGTCTATATAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGG
ACTCTCGCTCTCTCTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAG
TGGCCAGACACTCGGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACA
ACTGGAAGCTGCCTCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCG
AAGGTGGAAGACGTGAGTGCATCCATCCCATTATCCATTCGCGTCGCCCT
ATCTTCCTTTTTCCCCCCAACCCTTGAGATATCTTTCTATTTTCATTTCA
ATTGGTTATTCCTCTAAGCCGAGATATTCGGTCACATATGCCAATGAGAC
GGACACTGACATTTGCGGAGTTTTTGCAGTTCTACACGGCCCAGTTCTCG
AATGCCGGTGCTGACTAGGTTGTCTTTTTTGAGTTGATTTGTATGGTTGT
CAAAGGTATTGATGTGACTGTGGGTGTCTAGTAAAGTCTGCATTTGGGGA
GTTTAGCGTACGGCGTTTATCCTTTCGAACCAGTGAGCTTTGATTGATTG
ATTGATATTAAGCTTTCGTATATAGCCTGGGGCTTTCATTTTCTACACGC
TATTTCTGGTGTCTAGAGCCGAGGGATACGGAACTTCTATTGTTTCATCC
CAATCTTGCAATTTAAGTACTGTACATAGCGCATAGCAGCCCCGGCAAGA
GGTCCGTCCATCTGGTATGACAGGTTATGTCTTGGAGTCCTCATCTCTCT
AATACCTAATCGATCCACAGCATGGTCATGCTATATAGTAGTATAGCAGT
CACGGGGAAAGCACTCCAT
back to top

Coding sequence (CDS) from alignment at KZ851914.1:328335..329653-

>M747DRAFT_370302-T1 ID=M747DRAFT_370302-T1|Name=M747DRAFT_370302-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1665bp|location=Sequence derived from alignment at KZ851914.1:328335..329653- (Aspergillus niger ATCC 13496)
TTTTTGCAGTTCTACACGGCCCAGTTCTCGAATGCCGGTGCTGACTAGGT
CCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCTCGCTCTCTCTGGCT
GGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCCAGACACTCGGAAGC
AAGATCCGGAGATGGTGGTACGAGGTGAACAACTGGAAGCTGCCTCCTTT
GCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGTGGAAGACATGACCG
ACCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTCCATCAACCCG
GCGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAGCCTCCGAGAA
GCAGCCCATCGTGGAAGACGATGTCGCCTCCGAAGCAGGCAGTATCCCCT
CCGATGTCGTCGATCCTCACCGCATGATCAAGCCCGTCTCGCGACGACAC
CATCTGCCCCCATTGCCCGATCTGCGCTTCGAACAGAGCTATCTCGCCAG
CTTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATTACCATCAGAG
ACCAGTTTTTGCAGTTCTACACGGCCCAGTTCTCGAATGCCGGTGCTGAC
TAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCTCGCTCTCTC
TGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCCAGACACTCG
GAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAACTGGAAGCTGCCT
CCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGTGGAAGACAT
GACCGACCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTCCATCA
ACCCGGCGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAGCCTCC
GAGAAGCAGCCCATCGTGGAAGACGATGTCGCCTCCGAAGCAGGCAGTAT
CCCCTCCGATGTCGTCGATCCTCACCGCATGATCAAGCCCGTCTCGCGAC
GACACCATCTGCCCCCATTGCCCGATCTGCGCTTCGAACAGAGCTATCTC
GCCAGCTTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATTACCAT
CAGAGACCAGTTTTTGCAGTTCTACACGGCCCAGTTCTCGAATGCCGGTG
CTGACTAGGTCCTCCTCCCTCTAATCCAGGGCACCGTCTGGACTCTCGCT
CTCTCTGGCTGGCGATTCTGGAACCGCAACGCGTCCCTCAGTGGCCAGAC
ACTCGGAAGCAAGATCCGGAGATGGTGGTACGAGGTGAACAACTGGAAGC
TGCCTCCTTTGCGATCGGCCAGGGATCCTCACATGGCGGCGAAGGTGGAA
GACATGACCGACCCCGCCCTCCAAATCCCCGAAGTCATCCAAACCGCCTC
CATCAACCCGGCGCCGTCCCCGGAACACGACGTCAACCCGCCCACCGCAG
CCTCCGAGAAGCAGCCCATCGTGGAAGACGATGTCGCCTCCGAAGCAGGC
AGTATCCCCTCCGATGTCGTCGATCCTCACCGCATGATCAAGCCCGTCTC
GCGACGACACCATCTGCCCCCATTGCCCGATCTGCGCTTCGAACAGAGCT
ATCTCGCCAGCTTGCGGGGAGCTGATACCTGGGGCCGAGTAGCTTGGATT
ACCATCAGAGACCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370302M747DRAFT_370302Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370302-T1M747DRAFT_370302-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370302-T1.cdsM747DRAFT_370302-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370302-T1.utr3p1M747DRAFT_370302-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370302-T1.exon3M747DRAFT_370302-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_370302-T1.exon2M747DRAFT_370302-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_370302-T1.exon1M747DRAFT_370302-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370302-T1.utr5p1M747DRAFT_370302-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013898
DBxrefPFAM:PF08589
ProductDUF1770-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:328335..329653 -
Powered by Drupal