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M747DRAFT_370374-T1, M747DRAFT_370374-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_370374-T1
Unique NameM747DRAFT_370374-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:600472..602032+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_370374-T1 ID=M747DRAFT_370374-T1|Name=M747DRAFT_370374-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1561bp|location=Sequence derived from alignment at KZ851914.1:600472..602032+ (Aspergillus niger ATCC 13496)
CTCCATCTTTAGCTACTACATCCTTTACGACACCGAGCGCATTGTGTAGC
TGTTTTCCACCATGATCGAAGACGAAATATACCGGTCATCCTCTCAGTTC
CGACTGTGGTCCTTCACCGAAGCATCGCTGAAGCAATTACGAGCAACCAC
CAACTCCGTCGCGAGTGACCGAGTGCGAGCAGCTCTACGAAGAGCACAAG
AGGCTCGAAGATCAGCCACCTCCTCCACGACAGGGACACCGGCCCCCGGA
AGCGATGCGGAGAACAAGGCAACGGAAGAGAAACAAATCGAGTGCTTGAC
ACCCGAAGAAGAGCAGCAAGTCGTGGACTACTACTCCGAACAAATCATAC
AACTAGGGGAGAACTACAAGCCACCACTTCCCACCATCGTGAGAGTACGA
CAGCCCTCCTATCCCATACCTGCAAACCTCAAAGCTAACCTACCCATCCC
CAAAGGCCACCGCAATCCAATACCTCCGCCGCTTCTACCTCACCAACTCC
CCGATGACCTACCACCCCAAACAAATCATGCCGTGCGCCCTCTTCCTCGC
CACCAAAACCGACAACTACTACCTCTCCCTACGGCAATTCGCCGAAGGCG
TTCCCGGCCAAACCTCCGCAGACGACATAATCGCCCCAGAATTTCTCGTC
ATGCAAAGCCTCCGCTTCACCTTCGACGTGCGCCACCCCTTCCGCGGCCT
CGAAGGCGGCATCATGGAACTCCGCGCCATATCCCAAGGCCAAGGCCAAC
CAGCACCACACCTCCAGCAATCCCAAACCCCCGAAGACCTCCGTAGGACT
CTCCTCTCCCTCTCCCCCTCGTCCGCCACCGCAAACACAATGAACGACCG
CATCTCCCGCGCCCACCACTCGACCCGCGAGATCCTCAAAGCCGCCGCGC
AAATCACAGACGCCTACTTCCTCTACACCCCCTCGCAGATCTGGCTCTCC
GCGTTCCTCCTCGCCGATCGCCCCTTGGCTGAATTCTACCTCGACACGAA
ACTAGGCGGTCCCATCATATCATCAACAAACCAAGATCAAAACCCCCTTT
ACGCCCTACGCACGAAACTCCTCTCCACCCTCACAAACTGCTCCGCCCTC
CTGCAGGCATACAAGCCCTTCGCATCCGACGAAGCCCGCATGAAGACCCT
CAAACGCATCGTCGGGAAGAAACTCTACCATTGCCAGAACCCAGAGAAAG
CCAATATCGCAGGCCAGAAACGCATCCCTGCCGCTGCTGCGGCCGCGGCC
GCAGCTGCAGCTGCAGCAGGCGAGTCGGGGACGTCAGAAAGCGAAATGGA
GCGTCTAGCGAAGAAGCGGAAGCTAGAGCGGGGGAGTGAGACGAAAGACC
TCTTCGGAGGGGAGTTAGTCACGCAGCGGACTAAGGAGAGGCAGATGGAG
GGGTAATAGCAGCAGCTATATCAATATCCTTATCATGTCATTAATACTAT
ATCTACCGTTTTTGGTGAAGACGTTGGTGAATCGTCGTTTTGAGCGTGCA
GATAGGCGCAATTAGATGGAAAAGCATATTGTTAATTACTTTATTCATTT
AAAAAGTGGGG
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Coding sequence (CDS) from alignment at KZ851914.1:600472..602032+

>M747DRAFT_370374-T1 ID=M747DRAFT_370374-T1|Name=M747DRAFT_370374-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2568bp|location=Sequence derived from alignment at KZ851914.1:600472..602032+ (Aspergillus niger ATCC 13496)
ATGATCGAAGACGAAATATACCGGTCATCCTCTCAGTTCCGACTGTGGTC
CTTCACCGAAGCATCGCTGAAGCAATTACGAGCAACCACCAACTCCGTCG
CGAGTGACCGAGTGCGAGCAGCTCTACGAAGAGCACAAGAGGCTCGAAGA
TCAGCCACCTCCTCCACGACAGGGACACCGGCCCCCGGAAGCGATGCGGA
GAACAAGGCAACGGAAGAGAAACAAATCGAGTGCTTGACACCCGAAGAAG
AGCAGCAAGTCGTGGACTACTACTCCGAACAAATCATACAACTAGGGGAG
AACTACAAGCCACCACTTCCCACCATCGTGAGAGCCACCGCAATCCAATA
CCTCCGCCGCTTCTACCTCACCAACTCCCCGATGACCTACCACCCCAAAC
AAATCATGCCGTGCGCCCTCTTCCTCGCCACCAAAACCGACAACTACTAC
CTCTCCCTACGGCAATTCGCCGAAGGCGTTCCCGGCCAAACCTCCGCAGA
CGACATAATCGCCCCAGAATTTCTCGTCATGCAAAGCCTCCGCTTCACCT
TCGACGTGCGCCACCCCTTCCGCGGCCTCGAAGGCGGCATCATGGAACTC
CGCGCCATATCCCAAGGCCAAGGCCAACCAGCACCACACCTCCAGCAATC
CCAAACCCCCGAAGACCTCCGTAGGACTCTCCTCTCCCTCTCCCCCTCGT
CCGCCACCGCAAACACAATGAACGACCGCATCTCCCGCGCCCACCACTCG
ACCCGCGAGATCCTCAAAGCCGCCGCGCAAATCACAGACGCCTACTTCCT
CTACACCCCCTCGCAGATCTGGCTCTCCGCGTTCCTCCTCGCCGATCGCC
CCTTGGCTGAATTCTACCTCGACACGAAACTAGGCGGTCCCATCATATCA
TCAACAAACCAAGATCAAAACCCCCTTTACGCCCTACGCACGAAACTCCT
CTCCACCCTCACAAACTGCTCCGCCCTCCTGCAGGCATACAAGCCCTTCG
CATCCGACGAAGCCCGCATGAAGACCCTCAAACGCATCGTCGGGAAGAAA
CTCTACCATTGCCAGAACCCAGAGAAAGCCAATATCGCAGGCCAGAAACG
CATCCCTGCCGCTGCTGCGGCCGCGGCCGCAGCTGCAGCTGCAGCAGGCG
AGTCGGGGACGTCAGAAAGCGAAATGGAGCGTCTAGCGAAGAAGCGGAAG
CTAGAGCGGGGGAGTGAGACGAAAGACCTCTTCGGAGGGGAGTTAGTCAC
GCAGCGGACTAAGGAGAGGCAGATGGAGGGGTAAATGATCGAAGACGAAA
TATACCGGTCATCCTCTCAGTTCCGACTGTGGTCCTTCACCGAAGCATCG
CTGAAGCAATTACGAGCAACCACCAACTCCGTCGCGAGTGACCGAGTGCG
AGCAGCTCTACGAAGAGCACAAGAGGCTCGAAGATCAGCCACCTCCTCCA
CGACAGGGACACCGGCCCCCGGAAGCGATGCGGAGAACAAGGCAACGGAA
GAGAAACAAATCGAGTGCTTGACACCCGAAGAAGAGCAGCAAGTCGTGGA
CTACTACTCCGAACAAATCATACAACTAGGGGAGAACTACAAGCCACCAC
TTCCCACCATCGTGAGAGCCACCGCAATCCAATACCTCCGCCGCTTCTAC
CTCACCAACTCCCCGATGACCTACCACCCCAAACAAATCATGCCGTGCGC
CCTCTTCCTCGCCACCAAAACCGACAACTACTACCTCTCCCTACGGCAAT
TCGCCGAAGGCGTTCCCGGCCAAACCTCCGCAGACGACATAATCGCCCCA
GAATTTCTCGTCATGCAAAGCCTCCGCTTCACCTTCGACGTGCGCCACCC
CTTCCGCGGCCTCGAAGGCGGCATCATGGAACTCCGCGCCATATCCCAAG
GCCAAGGCCAACCAGCACCACACCTCCAGCAATCCCAAACCCCCGAAGAC
CTCCGTAGGACTCTCCTCTCCCTCTCCCCCTCGTCCGCCACCGCAAACAC
AATGAACGACCGCATCTCCCGCGCCCACCACTCGACCCGCGAGATCCTCA
AAGCCGCCGCGCAAATCACAGACGCCTACTTCCTCTACACCCCCTCGCAG
ATCTGGCTCTCCGCGTTCCTCCTCGCCGATCGCCCCTTGGCTGAATTCTA
CCTCGACACGAAACTAGGCGGTCCCATCATATCATCAACAAACCAAGATC
AAAACCCCCTTTACGCCCTACGCACGAAACTCCTCTCCACCCTCACAAAC
TGCTCCGCCCTCCTGCAGGCATACAAGCCCTTCGCATCCGACGAAGCCCG
CATGAAGACCCTCAAACGCATCGTCGGGAAGAAACTCTACCATTGCCAGA
ACCCAGAGAAAGCCAATATCGCAGGCCAGAAACGCATCCCTGCCGCTGCT
GCGGCCGCGGCCGCAGCTGCAGCTGCAGCAGGCGAGTCGGGGACGTCAGA
AAGCGAAATGGAGCGTCTAGCGAAGAAGCGGAAGCTAGAGCGGGGGAGTG
AGACGAAAGACCTCTTCGGAGGGGAGTTAGTCACGCAGCGGACTAAGGAG
AGGCAGATGGAGGGGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_370374M747DRAFT_370374Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370374-T1.utr5p1M747DRAFT_370374-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370374-T1.exon1M747DRAFT_370374-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_370374-T1.exon2M747DRAFT_370374-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370374-T1.cdsM747DRAFT_370374-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370374-T1.utr3p1M747DRAFT_370374-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_370374-T1M747DRAFT_370374-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263SFX
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR006671
DBxrefInterPro:IPR031658
DBxrefInterPro:IPR013763
DBxrefPFAM:PF00134
DBxrefPFAM:PF16899
Productcyclin Ccl1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:600472..602032 +
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