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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851917.1:519830..521336- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_370935-T1 ID=M747DRAFT_370935-T1|Name=M747DRAFT_370935-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1507bp|location=Sequence derived from alignment at KZ851917.1:519830..521336- (Aspergillus niger ATCC 13496)
CGGTTATTCATTGCACTTCTATTCTTTCGGTTGTGTTCAACTATATCTAC
AGTTGTCTCTTTACGATCGCATCACTGAGCTGTGCTAGTCGATCAATTGC
CGCTCTCACTCAATCAAATCCCCCGCCACTCACACTCATCGCTCGCCGAT
GAGCTTCCGTCAAGCCCTCAGACCCTTCCGTCGCACCATGTCCGGTGAAA
AGATCTACGAAGGCGTATTCGGTATACCTCACTCCTAGCATTATTGCTTT
AATGTACCTCCAAGCTAATATAACGGAATGATAAACAGCCGTCCACAAAC
CCCAAGGCGTCTCCTCCGCCGACGTCGTCCGCACCCTCCAAACGCACTTC
AACCCCTCCACGCTCTTCGCCCCCTGGCTCGCCGACGAGCGCGCCCGTCG
CGCCCGCGAAAGCACCTACCAGCGCAAGCGCCGCCGCACGCAACGTCTCG
ACGTGAAGATCGGCCACGGAGGCACCCTCGACCCCCTCGCGACCGGCATT
CTCGTCGCGGGAGTCGGCAAGGGCACGAAACACCTGAACGAGTTCCTAGG
ATGCACGAAGCAATATGAGACCGTTGTGCTGTTCGGCGCCGAGACGGATA
CCTATGATCGGCTGGGGAAGGTGGTGCGCAAGGCGCCCTACGAGCATGTG
ACAAGGGAGATGGTGGAGAAGGCACTGGAGCAGTTCCGCGGGAAGATTAT
GCAGAGGCCGCCAATTTTCTCGGCGCTGAAGGTGAATGGCAAGAAGCTTT
ATGAGTATGCCCGCGAGGGCAAGGAGCCGCCGATTGAGATCCAGAAGAGG
CCGGTCGAGGTGACGGATTTGAGGATTGTCGAGTGGTACGAGCCTGGAAC
GCATGAGTTTAAATGGCCTGAGGTTGAGGCAGAGGGGGAGGAGAAGGCTG
TTGCGGAGAAGTTGTTGGCGAAGGAGGATGAGTTGCCGATTGTGGAGAGG
GAGGCAGATGGTGAAGGAGAGGCCTCTGCGAAGAGAAAGTCCCCGCCTGC
GGAGGATGCTAAGGAGGAGAAGGTAGAGGGTGGTGATGCTGAGTCTGCTC
CCTCGGCTAAGAAGCAGAAGGTTGCTGATGGCGAGGCTGCGCCTGTTGCG
CCGGCCGAGCAGGAAGCGTCGGATGCTCCCAAGGCTGAAGCCGAGGAATC
CTCGGAATCCAAGCCCCAGTCCCAGCCTCAGCCGGCTGCAGTGAAGATCA
CCATGACGGTGTCTTCTGGCTTCTATGTGCGCTCCTTGGCGCACGACCTG
GGCAAGGCGGTCGGAAGCTGCGGGCTGATGTCCTCGCTGATCCGGTCTCG
TCAGGCTCAATTCGAGCTTCACCCGGACAAGGTGCTCGAGTATAAGGACC
TCGAGGCCGGCGAGGAGGTCTGGGGCCCCAAGGTCCAGCGATTCCTCGAG
GACTGGGAGGAAAAGCGACTGGCTCGGCCGTCGTCTCCGCGTTCCCCGAA
ACAAAATTAGTCAGTAATAGCTACTGGGCCGGCGTTGGGAGATGTAATAA
AACGTTC back to topCoding sequence (CDS) from alignment at KZ851917.1:519830..521336- >M747DRAFT_370935-T1 ID=M747DRAFT_370935-T1|Name=M747DRAFT_370935-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2490bp|location=Sequence derived from alignment at KZ851917.1:519830..521336- (Aspergillus niger ATCC 13496)
CCGTCCACAAACCCCAAGGCGTCTCCTCCGCCGACGTCGTCCGCACCCTC
CAAACGCACTTCAACCCCTCCACGCTCTTCGCCCCCTGGCTCGCCGACGA
GCGCGCCCGTCGCGCCCGCGAAAGCACCTACCAGCGCAAGCGCCGCCGCA
CGCAACGTCTCGACGTGAAGATCGGCCACGGAGGCACCCTCGACCCCCTC
GCGACCGGCATTCTCGTCGCGGGAGTCGGCAAGGGCACGAAACACCTGAA
CGAGTTCCTAGGATGCACGAAGCAATATGAGACCGTTGTGCTGTTCGGCG
CCGAGACGGATACCTATGATCGGCTGGGGAAGGTGGTGCGCAAGGCGCCC
TACGAGCATGTGACAAGGGAGATGGTGGAGAAGGCACTGGAGCAGTTCCG
CGGGAAGATTATGCAGAGGCCGCCAATTTTCTCGGCGCTGAAGGTGAATG
GCAAGAAGCTTTATGAGTATGCCCGCGAGGGCAAGGAGCCGCCGATTGAG
ATCCAGAAGAGGCCGGTCGAGGTGACGGATTTGAGGATTGTCGAGTGGTA
CGAGCCTGGAACGCATGAGTTTAAATGGCCTGAGGTTGAGGCAGAGGGGG
AGGAGAAGGCTGTTGCGGAGAAGTTGTTGGCGAAGGAGGATGAGTTGCCG
ATTGTGGAGAGGGAGGCAGATGGTGAAGGAGAGGCCTCTGCGAAGAGAAA
GTCCCCGCCTGCGGAGGATGCTAAGGAGGAGAAGGTAGAGGGTGGTGATG
CTGAGTCTGCTCCCTCGGCTAAGAAGCAGAAGGTTGCTGATGGCGAGGCT
GCGCCTGTTGCGCCGGCCGAGCAGGAAGCGTCGGATGCTCCCAAGGCTGA
AGCCGAGGAATCCTCGGAATCCAAGCCCCAGTCCCAGCCTCAGCCGGCTG
CAGTGAAGATCACCATGACGGTGTCTTCTGGCTTCTATGTGCGCTCCTTG
GCGCACGACCTGGGCAAGGCGGTCGGAAGCTGCGGGCTGATGTCCTCGCT
GATCCGGTCTCGTCAGGCTCAATTCGAGCTTCACCCGGACAAGGTGCTCG
AGTATAAGGACCTCGAGGCCGGCGAGGAGGTCTGGGGCCCCAAGGTCCAG
CGATTCCTCGAGGACTGGGAGGAAAAGCGACTGGCTCGGCCGTCGTCTCC
GCGTTCCCCGAAACAAAATTAGATGAGCTTCCGTCAAGCCCTCAGACCCT
TCCGTCGCACCATGTCCGGTGAAAAGATCTACGAAGGCGTATTCGCCGTC
CACAAACCCCAAGGCGTCTCCTCCGCCGACGTCGTCCGCACCCTCCAAAC
GCACTTCAACCCCTCCACGCTCTTCGCCCCCTGGCTCGCCGACGAGCGCG
CCCGTCGCGCCCGCGAAAGCACCTACCAGCGCAAGCGCCGCCGCACGCAA
CGTCTCGACGTGAAGATCGGCCACGGAGGCACCCTCGACCCCCTCGCGAC
CGGCATTCTCGTCGCGGGAGTCGGCAAGGGCACGAAACACCTGAACGAGT
TCCTAGGATGCACGAAGCAATATGAGACCGTTGTGCTGTTCGGCGCCGAG
ACGGATACCTATGATCGGCTGGGGAAGGTGGTGCGCAAGGCGCCCTACGA
GCATGTGACAAGGGAGATGGTGGAGAAGGCACTGGAGCAGTTCCGCGGGA
AGATTATGCAGAGGCCGCCAATTTTCTCGGCGCTGAAGGTGAATGGCAAG
AAGCTTTATGAGTATGCCCGCGAGGGCAAGGAGCCGCCGATTGAGATCCA
GAAGAGGCCGGTCGAGGTGACGGATTTGAGGATTGTCGAGTGGTACGAGC
CTGGAACGCATGAGTTTAAATGGCCTGAGGTTGAGGCAGAGGGGGAGGAG
AAGGCTGTTGCGGAGAAGTTGTTGGCGAAGGAGGATGAGTTGCCGATTGT
GGAGAGGGAGGCAGATGGTGAAGGAGAGGCCTCTGCGAAGAGAAAGTCCC
CGCCTGCGGAGGATGCTAAGGAGGAGAAGGTAGAGGGTGGTGATGCTGAG
TCTGCTCCCTCGGCTAAGAAGCAGAAGGTTGCTGATGGCGAGGCTGCGCC
TGTTGCGCCGGCCGAGCAGGAAGCGTCGGATGCTCCCAAGGCTGAAGCCG
AGGAATCCTCGGAATCCAAGCCCCAGTCCCAGCCTCAGCCGGCTGCAGTG
AAGATCACCATGACGGTGTCTTCTGGCTTCTATGTGCGCTCCTTGGCGCA
CGACCTGGGCAAGGCGGTCGGAAGCTGCGGGCTGATGTCCTCGCTGATCC
GGTCTCGTCAGGCTCAATTCGAGCTTCACCCGGACAAGGTGCTCGAGTAT
AAGGACCTCGAGGCCGGCGAGGAGGTCTGGGGCCCCAAGGTCCAGCGATT
CCTCGAGGACTGGGAGGAAAAGCGACTGGCTCGGCCGTCGTCTCCGCGTT
CCCCGAAACAAAATTAGATGAGCTTCCGTCAAGCCCTCAGACCCTTCCGT
CGCACCATGTCCGGTGAAAAGATCTACGAAGGCGTATTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009982 | pseudouridine synthase activity |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009451 | RNA modification |
| GO:0001522 | pseudouridine synthesis |
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HU0 |
| DBxref | InterPro:IPR020103 |
| DBxref | InterPro:IPR014780 |
| DBxref | InterPro:IPR002501 |
| DBxref | PFAM:PF01509 |
| Product | pseudouridine synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851917.1 | supercontig | KZ851917.1:519830..521336 - |
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