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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851920.1:273471..275902- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_371407-T1 ID=M747DRAFT_371407-T1|Name=M747DRAFT_371407-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2432bp|location=Sequence derived from alignment at KZ851920.1:273471..275902- (Aspergillus niger ATCC 13496)
CTCCATTCCTACTGGCGTGGGCTGCATGGATTATATTGCCATTTGATACT
CGTCTATCGGAGCACTGCACCCTCGTTCCTCCATCATGTTCAAGAAGAAG
CCCACGGTACGTTACCCCTCCCCCGCACCACTCTGGGATCGGTCACAACA
CGGAAAGGTCAATCGTGCCTTTAGAGCTCATTACTCACGCTAGCCAAACG
CAGATCAAGAACCTTTCTCCCCTGCGGTCTTCCGACCGTCGGAAGATTGC
CGATCAGATAATCAGAGATTACAAGATCGAGGTCCCGCAAAGTGCGCCAG
TTGAAACCAGCGGCGACGACTCAGCTCCAGGCGCATCCAACCCAACGGCG
CCAAACCTCACCTCCATCCGAAATGCCTTACTTCCCGAGGATTGCTTGAC
CGCACGCTTCACTACGACCGCCGGGCCCCAGCTTCGCGAAGTACAAGGGA
CAGTGTATGTTGGAACACATCCGGGGGCCGACGAAAGGATCCTGTGGTTC
AGAGTCGACCATGGGCCCGGCGCCGATGGACGCCTCTACCCTACGGTATA
TACACTTTGGCACAACCCAGATCTGGTGCCACTGCTCCATACTCCACAAA
TGGTCATGCAGAAACTGCACGGAGGAGCAGACCTGATGACTCCGGGTCTG
GCCAATGACCCGCCTTTCGACGAGCGTGCCGTCAAGGGCGCAGTGGTTGC
TGTCGCTAGTCTGAACAGGCATACGGTACCACTGTTTGTGGGCGTGTGTG
AGATTGACATCTCTGCACTTGGAGAGGTTCAGGGTACGAAGGGACATGCT
GTTCGGGGTCTGCACTGGGAAGGCGATGAGTTGTGGGCTTGGAGCTCGTC
TTCCAAGCCGGGTCAGCCCGCTCCAGAATATCTAGAGGGGTGGGATGATG
AACTGGAAGAGGACGAAGATGTAGGAGAGATTGAAGAGGGCGTGCAGGGC
CTAGCAGTAGGAGGTGACGATGCAGTTCAAGCAACTGGAGGCGAGGAAGC
ATCAGATGAGGCGCCTGATGTCCCGCAGGAGGAGGCACCTGAAGTTGAAG
AGAAGGAGCCCACAACCAAAGGTGAGTCTCGCTCAATACAACCTGAGTGT
AGCTATACTGACCGCTTGAAGAAATTGACGAGGCTTTCGAAAAGGCCTTC
CTCTACTCCCTCTACAAGCTCAAGCAAGATAATCCATCTGCTACCAACCA
CGGTCTATCTCTACCCGTCCAACCATCTGCTCTGATATCAAACATGATCA
CACCCCACCTGCCCATATACACTGCCAAACAAGCCCAATACTATCAAATC
AAGAAGACCAGCTGGAAAAATGTGAAAAAGTTCATCAAATATCTGGACAA
GCAGCGCCTGGTCAAGTCCAAAGACCGCAACGGCCAAGAGACCGTCATCC
TCGACGTGGACTTCAACGACCATCGTGTTGAACAGTTCATCCCTTACAGA
CTCCCATCCAAGAATACCGTTGAGAACGCAGGAAAGCCTGCCACTCAGGC
AAATAACGCCAAAACCGCATCTACACAGAGCGGTGACCCCTCAGTCGGCC
AAACCCTGACCGTGCAGACTGTATATCGCCCAACCAACAAACTCACGCCG
ACCATCTTCCCTGCTCTATCCAGCACCCACCCCAGCAACTACTACAAGTA
CACCGACATCTCCACTCACCTCGACCAATACATCCAATCTCAAAATCCCC
CGCTCGTCGACCCCAAAAACAAACGCATTATCACCCTCAACCCCTACCTC
GCCAATACCATCTTCACCTCTTCCTCCGCCGATGACAAAAGCACTCTCGC
CCGCGGCAAGACCACCCGCGACGGCCTCCTCAAGCGTCTCATCGATGACC
ACTCCCTCATGACAGCCCACTACGTCATCCTACGGCCCGGTCAAAACCTC
TCCGACGTGAAGCCCAAAGCAGGCGCCGCCCCCAAGGTCAACGTAATTCT
CGAACGCCGCACCGGCTCCAAGACCGTCACCAAGGTCTGGAACCTCGAAG
TGTTCGGCATCATCCCTAGTCTTCTGGCCGAAGAGCTGCAGAAGAAGTGT
GCTAGCAGCACCAGCGTGACGCAGGCTACTGGCGCGCCGAAGGGCGTTAT
GGAGGTGCTTGTCCAGGGAGACCAGCGACGCGCGTTAGAGACGGCGTTGG
TGAGACGTGGGTTGAGGACGCAGTGGATTGATGTTGTGGATAAGACGAAG
AAGAAGAAATAAGCAATCGGGATAAAAAGGGCTGAAAGAGTGATGGTTTT
ACATATGTTACCGTTCTATACGTGCAGTAGTTGATGAATATATGTGCAAA
CCTGGCTATTGCCCTCGATATCTCGACTACTTGGAAGGAACTCAAGTAAT
GTAGCTCTGGGTATCATTAGTTGTGCACTGCATTAGTATAGGGTGCTGCT
GCTAAGCATTGCAATTCCATCATATAACCAGT back to topCoding sequence (CDS) from alignment at KZ851920.1:273471..275902- >M747DRAFT_371407-T1 ID=M747DRAFT_371407-T1|Name=M747DRAFT_371407-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5940bp|location=Sequence derived from alignment at KZ851920.1:273471..275902- (Aspergillus niger ATCC 13496)
AAATTGACGAGGCTTTCGAAAAGGCCTTCCTCTACTCCCTCTACAAGCTC
AAGCAAGATAATCCATCTGCTACCAACCACGGTCTATCTCTACCCGTCCA
ACCATCTGCTCTGATATCAAACATGATCACACCCCACCTGCCCATATACA
CTGCCAAACAAGCCCAATACTATCAAATCAAGAAGACCAGCTGGAAAAAT
GTGAAAAAGTTCATCAAATATCTGGACAAGCAGCGCCTGGTCAAGTCCAA
AGACCGCAACGGCCAAGAGACCGTCATCCTCGACGTGGACTTCAACGACC
ATCGTGTTGAACAGTTCATCCCTTACAGACTCCCATCCAAGAATACCGTT
GAGAACGCAGGAAAGCCTGCCACTCAGGCAAATAACGCCAAAACCGCATC
TACACAGAGCGGTGACCCCTCAGTCGGCCAAACCCTGACCGTGCAGACTG
TATATCGCCCAACCAACAAACTCACGCCGACCATCTTCCCTGCTCTATCC
AGCACCCACCCCAGCAACTACTACAAGTACACCGACATCTCCACTCACCT
CGACCAATACATCCAATCTCAAAATCCCCCGCTCGTCGACCCCAAAAACA
AACGCATTATCACCCTCAACCCCTACCTCGCCAATACCATCTTCACCTCT
TCCTCCGCCGATGACAAAAGCACTCTCGCCCGCGGCAAGACCACCCGCGA
CGGCCTCCTCAAGCGTCTCATCGATGACCACTCCCTCATGACAGCCCACT
ACGTCATCCTACGGCCCGGTCAAAACCTCTCCGACGTGAAGCCCAAAGCA
GGCGCCGCCCCCAAGGTCAACGTAATTCTCGAACGCCGCACCGGCTCCAA
GACCGTCACCAAGGTCTGGAACCTCGAAGTGTTCGGCATCATCCCTAGTC
TTCTGGCCGAAGAGCTGCAGAAGAAGTGTGCTAGCAGCACCAGCGTGACG
CAGGCTACTGGCGCGCCGAAGGGCGTTATGGAGGTGCTTGTCCAGGGAGA
CCAGCGACGCGCGTTAGAGACGGCGTTGGTGAGACGTGGGTTGAGGACGC
AGTGGATTGATGTTGTGGATAAGACGAAGAAGAAGAAATAAATCAAGAAC
CTTTCTCCCCTGCGGTCTTCCGACCGTCGGAAGATTGCCGATCAGATAAT
CAGAGATTACAAGATCGAGGTCCCGCAAAGTGCGCCAGTTGAAACCAGCG
GCGACGACTCAGCTCCAGGCGCATCCAACCCAACGGCGCCAAACCTCACC
TCCATCCGAAATGCCTTACTTCCCGAGGATTGCTTGACCGCACGCTTCAC
TACGACCGCCGGGCCCCAGCTTCGCGAAGTACAAGGGACAGTGTATGTTG
GAACACATCCGGGGGCCGACGAAAGGATCCTGTGGTTCAGAGTCGACCAT
GGGCCCGGCGCCGATGGACGCCTCTACCCTACGGTATATACACTTTGGCA
CAACCCAGATCTGGTGCCACTGCTCCATACTCCACAAATGGTCATGCAGA
AACTGCACGGAGGAGCAGACCTGATGACTCCGGGTCTGGCCAATGACCCG
CCTTTCGACGAGCGTGCCGTCAAGGGCGCAGTGGTTGCTGTCGCTAGTCT
GAACAGGCATACGGTACCACTGTTTGTGGGCGTGTGTGAGATTGACATCT
CTGCACTTGGAGAGGTTCAGGGTACGAAGGGACATGCTGTTCGGGGTCTG
CACTGGGAAGGCGATGAGTTGTGGGCTTGGAGCTCGTCTTCCAAGCCGGG
TCAGCCCGCTCCAGAATATCTAGAGGGGTGGGATGATGAACTGGAAGAGG
ACGAAGATGTAGGAGAGATTGAAGAGGGCGTGCAGGGCCTAGCAGTAGGA
GGTGACGATGCAGTTCAAGCAACTGGAGGCGAGGAAGCATCAGATGAGGC
GCCTGATGTCCCGCAGGAGGAGGCACCTGAAGTTGAAGAGAAGGAGCCCA
CAACCAAAGATGTTCAAGAAGAAGCCCACGAAATTGACGAGGCTTTCGAA
AAGGCCTTCCTCTACTCCCTCTACAAGCTCAAGCAAGATAATCCATCTGC
TACCAACCACGGTCTATCTCTACCCGTCCAACCATCTGCTCTGATATCAA
ACATGATCACACCCCACCTGCCCATATACACTGCCAAACAAGCCCAATAC
TATCAAATCAAGAAGACCAGCTGGAAAAATGTGAAAAAGTTCATCAAATA
TCTGGACAAGCAGCGCCTGGTCAAGTCCAAAGACCGCAACGGCCAAGAGA
CCGTCATCCTCGACGTGGACTTCAACGACCATCGTGTTGAACAGTTCATC
CCTTACAGACTCCCATCCAAGAATACCGTTGAGAACGCAGGAAAGCCTGC
CACTCAGGCAAATAACGCCAAAACCGCATCTACACAGAGCGGTGACCCCT
CAGTCGGCCAAACCCTGACCGTGCAGACTGTATATCGCCCAACCAACAAA
CTCACGCCGACCATCTTCCCTGCTCTATCCAGCACCCACCCCAGCAACTA
CTACAAGTACACCGACATCTCCACTCACCTCGACCAATACATCCAATCTC
AAAATCCCCCGCTCGTCGACCCCAAAAACAAACGCATTATCACCCTCAAC
CCCTACCTCGCCAATACCATCTTCACCTCTTCCTCCGCCGATGACAAAAG
CACTCTCGCCCGCGGCAAGACCACCCGCGACGGCCTCCTCAAGCGTCTCA
TCGATGACCACTCCCTCATGACAGCCCACTACGTCATCCTACGGCCCGGT
CAAAACCTCTCCGACGTGAAGCCCAAAGCAGGCGCCGCCCCCAAGGTCAA
CGTAATTCTCGAACGCCGCACCGGCTCCAAGACCGTCACCAAGGTCTGGA
ACCTCGAAGTGTTCGGCATCATCCCTAGTCTTCTGGCCGAAGAGCTGCAG
AAGAAGTGTGCTAGCAGCACCAGCGTGACGCAGGCTACTGGCGCGCCGAA
GGGCGTTATGGAGGTGCTTGTCCAGGGAGACCAGCGACGCGCGTTAGAGA
CGGCGTTGGTGAGACGTGGGTTGAGGACGCAGTGGATTGATGTTGTGGAT
AAGACGAAGAAGAAGAAATAAATCAAGAACCTTTCTCCCCTGCGGTCTTC
CGACCGTCGGAAGATTGCCGATCAGATAATCAGAGATTACAAGATCGAGG
TCCCGCAAAGTGCGCCAGTTGAAACCAGCGGCGACGACTCAGCTCCAGGC
GCATCCAACCCAACGGCGCCAAACCTCACCTCCATCCGAAATGCCTTACT
TCCCGAGGATTGCTTGACCGCACGCTTCACTACGACCGCCGGGCCCCAGC
TTCGCGAAGTACAAGGGACAGTGTATGTTGGAACACATCCGGGGGCCGAC
GAAAGGATCCTGTGGTTCAGAGTCGACCATGGGCCCGGCGCCGATGGACG
CCTCTACCCTACGGTATATACACTTTGGCACAACCCAGATCTGGTGCCAC
TGCTCCATACTCCACAAATGGTCATGCAGAAACTGCACGGAGGAGCAGAC
CTGATGACTCCGGGTCTGGCCAATGACCCGCCTTTCGACGAGCGTGCCGT
CAAGGGCGCAGTGGTTGCTGTCGCTAGTCTGAACAGGCATACGGTACCAC
TGTTTGTGGGCGTGTGTGAGATTGACATCTCTGCACTTGGAGAGGTTCAG
GGTACGAAGGGACATGCTGTTCGGGGTCTGCACTGGGAAGGCGATGAGTT
GTGGGCTTGGAGCTCGTCTTCCAAGCCGGGTCAGCCCGCTCCAGAATATC
TAGAGGGGTGGGATGATGAACTGGAAGAGGACGAAGATGTAGGAGAGATT
GAAGAGGGCGTGCAGGGCCTAGCAGTAGGAGGTGACGATGCAGTTCAAGC
AACTGGAGGCGAGGAAGCATCAGATGAGGCGCCTGATGTCCCGCAGGAGG
AGGCACCTGAAGTTGAAGAGAAGGAGCCCACAACCAAAGATGTTCAAGAA
GAAGCCCACGAAATTGACGAGGCTTTCGAAAAGGCCTTCCTCTACTCCCT
CTACAAGCTCAAGCAAGATAATCCATCTGCTACCAACCACGGTCTATCTC
TACCCGTCCAACCATCTGCTCTGATATCAAACATGATCACACCCCACCTG
CCCATATACACTGCCAAACAAGCCCAATACTATCAAATCAAGAAGACCAG
CTGGAAAAATGTGAAAAAGTTCATCAAATATCTGGACAAGCAGCGCCTGG
TCAAGTCCAAAGACCGCAACGGCCAAGAGACCGTCATCCTCGACGTGGAC
TTCAACGACCATCGTGTTGAACAGTTCATCCCTTACAGACTCCCATCCAA
GAATACCGTTGAGAACGCAGGAAAGCCTGCCACTCAGGCAAATAACGCCA
AAACCGCATCTACACAGAGCGGTGACCCCTCAGTCGGCCAAACCCTGACC
GTGCAGACTGTATATCGCCCAACCAACAAACTCACGCCGACCATCTTCCC
TGCTCTATCCAGCACCCACCCCAGCAACTACTACAAGTACACCGACATCT
CCACTCACCTCGACCAATACATCCAATCTCAAAATCCCCCGCTCGTCGAC
CCCAAAAACAAACGCATTATCACCCTCAACCCCTACCTCGCCAATACCAT
CTTCACCTCTTCCTCCGCCGATGACAAAAGCACTCTCGCCCGCGGCAAGA
CCACCCGCGACGGCCTCCTCAAGCGTCTCATCGATGACCACTCCCTCATG
ACAGCCCACTACGTCATCCTACGGCCCGGTCAAAACCTCTCCGACGTGAA
GCCCAAAGCAGGCGCCGCCCCCAAGGTCAACGTAATTCTCGAACGCCGCA
CCGGCTCCAAGACCGTCACCAAGGTCTGGAACCTCGAAGTGTTCGGCATC
ATCCCTAGTCTTCTGGCCGAAGAGCTGCAGAAGAAGTGTGCTAGCAGCAC
CAGCGTGACGCAGGCTACTGGCGCGCCGAAGGGCGTTATGGAGGTGCTTG
TCCAGGGAGACCAGCGACGCGCGTTAGAGACGGCGTTGGTGAGACGTGGG
TTGAGGACGCAGTGGATTGATGTTGTGGATAAGACGAAGAAGAAGAAATA
AATCAAGAACCTTTCTCCCCTGCGGTCTTCCGACCGTCGGAAGATTGCCG
ATCAGATAATCAGAGATTACAAGATCGAGGTCCCGCAAAGTGCGCCAGTT
GAAACCAGCGGCGACGACTCAGCTCCAGGCGCATCCAACCCAACGGCGCC
AAACCTCACCTCCATCCGAAATGCCTTACTTCCCGAGGATTGCTTGACCG
CACGCTTCACTACGACCGCCGGGCCCCAGCTTCGCGAAGTACAAGGGACA
GTGTATGTTGGAACACATCCGGGGGCCGACGAAAGGATCCTGTGGTTCAG
AGTCGACCATGGGCCCGGCGCCGATGGACGCCTCTACCCTACGGTATATA
CACTTTGGCACAACCCAGATCTGGTGCCACTGCTCCATACTCCACAAATG
GTCATGCAGAAACTGCACGGAGGAGCAGACCTGATGACTCCGGGTCTGGC
CAATGACCCGCCTTTCGACGAGCGTGCCGTCAAGGGCGCAGTGGTTGCTG
TCGCTAGTCTGAACAGGCATACGGTACCACTGTTTGTGGGCGTGTGTGAG
ATTGACATCTCTGCACTTGGAGAGGTTCAGGGTACGAAGGGACATGCTGT
TCGGGGTCTGCACTGGGAAGGCGATGAGTTGTGGGCTTGGAGCTCGTCTT
CCAAGCCGGGTCAGCCCGCTCCAGAATATCTAGAGGGGTGGGATGATGAA
CTGGAAGAGGACGAAGATGTAGGAGAGATTGAAGAGGGCGTGCAGGGCCT
AGCAGTAGGAGGTGACGATGCAGTTCAAGCAACTGGAGGCGAGGAAGCAT
CAGATGAGGCGCCTGATGTCCCGCAGGAGGAGGCACCTGAAGTTGAAGAG
AAGGAGCCCACAACCAAAGATGTTCAAGAAGAAGCCCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003743 | translation initiation factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036885 |
| DBxref | InterPro:IPR015947 |
| DBxref | InterPro:IPR036877 |
| DBxref | InterPro:IPR039759 |
| DBxref | InterPro:IPR036974 |
| DBxref | InterPro:IPR001950 |
| DBxref | PFAM:PF01253 |
| Product | RNA binding protein Ligatin/Tma64 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851920.1 | supercontig | KZ851920.1:273471..275902 - |
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