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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851922.1:470556..473396- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_371781-T1 ID=M747DRAFT_371781-T1|Name=M747DRAFT_371781-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2841bp|location=Sequence derived from alignment at KZ851922.1:470556..473396- (Aspergillus niger ATCC 13496)
CCGATACCAACATACATAACATACCCATTGAATTGGAACATAGGGAGGAG
AGTGTTCTTTCCTTTTTATAACCCATTAACTTGTTTTGCTACATTTTATT
TCACGCAACCCAATTCACAAGAAAGGAAGAAATCTCTTGTTCCTTCCCTT
TCCCCCCACACGCCAACCATGGCCGGAACGAAAAAGCGCGCGAACGCCGA
CGACGACTTCGTGCTCACATTGTCGGACGATGAGAATGACACGTTAAATC
AGCTCGAAGAGGAGGGCGAGGGCGACGATGGTGCGCTAGCCACGGGATCG
AAAACGAAGAAGCGCAAGAGAGATGATGCTGCGGCGGCGCAGCAGGAGAA
GGGGAAGAACAAGAAGGTGAAGAAGCAGGAACAACAGCAACAACAAGCAC
AACAGAAGAAAAAGAAGGGAAAGAATGCCCCTGTTCAGGAGGAAGAGGAT
GAGGATGAAGAGGAGGAAGAGGATCAGGGTGAAGATGATGGCGCGCTTAA
TTCGGATTTCGAGTTCGATGTCGGCGGTGCTGCGAATGAGGTTAGGGATT
TCGATGGGTGGGAGGTTAATGGTAATGAGGAGGGTAAGGGTGGGGATAAG
AAGGCTGTGGATATCGATGATATTATTTCGAGGAGGCAGGCGAAGAAGGA
GGCTGAGTTGATTCGCAAGCAGAAGAAGAAGAAGCAGAAGCAAGAGGAGG
AGTTTAGTGAATTGGAGGATGATGATGAGGAGGATGGTGGTATGGAGGTC
GACTTTGGGGATGATGAGCTGCTTGCGGAGGATGGGTTCGGTATGGGTGT
CGATGGGGAGGAGGAGAGCGAGAAGTCCGATGCGGAGGATGAGGAGAAGG
AAGAAGGGTCTGATGAGGAGGCTGAGGGCAGTGATGAAGACGAGCAGATG
GATGAGGATGATGACGATGCTGCTTCGGATGACGACTCGGTTGCTACTCC
TGTCATGCACCCGGATGATATTGCCTCTGATCGGGACTCGGACGAGGAGA
GTCAGGTCGACGCCGAGGAAGAGGAGAAGCGCAAGGCTTTCTTCGCGCCC
GAGGAGGAAAAGACTTCCGAGTCTGCTATGGCAGATGCGAAGCGGTCGTT
CCAGGAATTCAACCTCTCTCGTCCCATCCTTCGTGGTCTCGCCGGAGTCA
ACTTCTCGAACCCTACACCCATTCAGCGCAAGACGATCCCCGTGGCTCTC
CTGGGCAAGGATATTGTCGGTAGTGCCGTTACTGGTTCCGGAAAGACTGC
CGCCTTCGTTGTCCCGATTCTCGAACGTCTGCTGTTCCGGCCGCGCAAGG
TCCCGACGAGTCGTGTTGCCATTCTCATGCCCACCCGTGAATTGGCGGTG
CAGTGCTACAATGTCGCTACAAAGCTGGCCACATACACGGACATCACCTT
CTGTCAGCTGGTCGGTGGTTTCAGTCTTCGCGAGCAGGAGAACATCTTGA
AGAAGCGTCCCGATGTGATCATCGCCACCCCCGGTCGTTTCATTGATCAC
ATGCGCAACTCGGCCAGCTTCACCGTTGATACTCTGGAAATCCTGGTTCT
GGATGAAGCCGACCGCATGCTCGAGGACGGTTTCGCCGACGAGTTGAACG
AGATTCTCACTACGATCCCCAAGTCGCGCCAGACTATGCTTTTCTCGGCT
ACGATGACGGACACTGTCGACAAGCTCATTCGCGTCGGTCTCAACCGCCC
CGTGCGCTTGATGGTCGACGCCAAGAAGAACACGGCCGTGACACTGGTGC
AGGAATTCGTGCGTCTGCGCCCCGGACGTGAGGACAAGCGACTAGGCTAC
CTTCTCTACCTCTGCAAAGAGATCTACACCGGTCGGGTGATTGTCTTCTT
CCGACAGAAGAAGGAGGCGCACCGGGTGCGTATCATCTTCGGACTGCTGG
GCTTGAAGGCTGCCGAGCTCCACGGTAGCATGAGCCAAGAACAGGTATGT
TATTTTACATCGACTTTCATTTTCTTCAATACGATCGATGATACTAATCG
TGGGGTTTTCCAAACTACAGCGTATCAAGAGTGTCGAGAATTTCCGTGAG
GGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCGTCGCGTGGTCTGGA
TATCAAGGGCGTTGAGACGGTCATCAACTACGAAGCGCCGCAGAGCCATG
AGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTGCGGGCCGCTCCGGT
CGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAGGTGGTCAAGGCGGC
GGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGCCAGCCGTGTGATTG
AACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGGAGGAGTTGGCGGAC
GAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAGAAGCAGCTGGCACA
GGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGATCAAGCACGAGGCGG
AGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGACGGAGCGCGACAAG
AAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAACGGGCCCGATGCCGG
CATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAAGGACAAGAAGCGTC
TGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTGGTTGGAAGAAGGGC
CGGGCAACACGGGAGAGCATGAAGAATGGGCAATTGCCCAAAGCTAAGAA
GGACAACAAGAAGAAGGGCAAGAAATGAGTCACAAGGGTGAGGTGACGGG
ACGGACTCAGAAGGATTTTCTAAAAAAAATTATCATTATTCGCATTAGCA
TATTGTGGATATACTGTATAGATATATTTTTCATTTTCTGC back to topCoding sequence (CDS) from alignment at KZ851922.1:470556..473396- >M747DRAFT_371781-T1 ID=M747DRAFT_371781-T1|Name=M747DRAFT_371781-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4968bp|location=Sequence derived from alignment at KZ851922.1:470556..473396- (Aspergillus niger ATCC 13496)
CGTATCAAGAGTGTCGAGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCT
GGCTACGGATCTGGCGTCGCGTGGTCTGGATATCAAGGGCGTTGAGACGG
TCATCAACTACGAAGCGCCGCAGAGCCATGAGATCTACCTGCATCGTGTT
GGTCGTACTGCGCGTGCGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGC
CGAGCCTGACCGCAAGGTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGC
AAGGAGCCAAGATTGCCAGCCGTGTGATTGAACCGGCGGTGGCGGATTCC
TGGGCGGCCAAGGCGGAGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTC
GGAGGAGAAGCTCGAGAAGCAGCTGGCACAGGCGGAGATGCAAGTGACCA
AGGGAGAGAACCTGATCAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAG
CGTACTTGGTTCGAGACGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGG
CGCGGCGGAGCTCAACGGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGC
AGAAGCTCAGCAACAAGGACAAGAAGCGTCTGGATGATTCCCGTCAGCGC
CAGGAAGCGGGTGCTGGTTGGAAGAAGGGCCGGGCAACACGGGAGAGCAT
GAAGAATGGGCAATTGCCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCA
AGAAATGAATGGCCGGAACGAAAAAGCGCGCGAACGCCGACGACGACTTC
GTGCTCACATTGTCGGACGATGAGAATGACACGTTAAATCAGCTCGAAGA
GGAGGGCGAGGGCGACGATGGTGCGCTAGCCACGGGATCGAAAACGAAGA
AGCGCAAGAGAGATGATGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAAC
AAGAAGGTGAAGAAGCAGGAACAACAGCAACAACAAGCACAACAGAAGAA
AAAGAAGGGAAAGAATGCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAG
AGGAGGAAGAGGATCAGGGTGAAGATGATGGCGCGCTTAATTCGGATTTC
GAGTTCGATGTCGGCGGTGCTGCGAATGAGGTTAGGGATTTCGATGGGTG
GGAGGTTAATGGTAATGAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGG
ATATCGATGATATTATTTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTG
ATTCGCAAGCAGAAGAAGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGA
ATTGGAGGATGATGATGAGGAGGATGGTGGTATGGAGGTCGACTTTGGGG
ATGATGAGCTGCTTGCGGAGGATGGGTTCGGTATGGGTGTCGATGGGGAG
GAGGAGAGCGAGAAGTCCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTC
TGATGAGGAGGCTGAGGGCAGTGATGAAGACGAGCAGATGGATGAGGATG
ATGACGATGCTGCTTCGGATGACGACTCGGTTGCTACTCCTGTCATGCAC
CCGGATGATATTGCCTCTGATCGGGACTCGGACGAGGAGAGTCAGGTCGA
CGCCGAGGAAGAGGAGAAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAA
AGACTTCCGAGTCTGCTATGGCAGATGCGAAGCGGTCGTTCCAGGAATTC
AACCTCTCTCGTCCCATCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAA
CCCTACACCCATTCAGCGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGG
ATATTGTCGGTAGTGCCGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTT
GTCCCGATTCTCGAACGTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAG
TCGTGTTGCCATTCTCATGCCCACCCGTGAATTGGCGGTGCAGTGCTACA
ATGTCGCTACAAAGCTGGCCACATACACGGACATCACCTTCTGTCAGCTG
GTCGGTGGTTTCAGTCTTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCC
CGATGTGATCATCGCCACCCCCGGTCGTTTCATTGATCACATGCGCAACT
CGGCCAGCTTCACCGTTGATACTCTGGAAATCCTGGTTCTGGATGAAGCC
GACCGCATGCTCGAGGACGGTTTCGCCGACGAGTTGAACGAGATTCTCAC
TACGATCCCCAAGTCGCGCCAGACTATGCTTTTCTCGGCTACGATGACGG
ACACTGTCGACAAGCTCATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTG
ATGGTCGACGCCAAGAAGAACACGGCCGTGACACTGGTGCAGGAATTCGT
GCGTCTGCGCCCCGGACGTGAGGACAAGCGACTAGGCTACCTTCTCTACC
TCTGCAAAGAGATCTACACCGGTCGGGTGATTGTCTTCTTCCGACAGAAG
AAGGAGGCGCACCGGGTGCGTATCATCTTCGGACTGCTGGGCTTGAAGGC
TGCCGAGCTCCACGGTAGCATGAGCCAAGAACAGCGTATCAAGAGTGTCG
AGAATTTCCGTGAGGGCAAGGCGGCGTTCCTGCTGGCTACGGATCTGGCG
TCGCGTGGTCTGGATATCAAGGGCGTTGAGACGGTCATCAACTACGAAGC
GCCGCAGAGCCATGAGATCTACCTGCATCGTGTTGGTCGTACTGCGCGTG
CGGGCCGCTCCGGTCGGGCCTGCACCATTGCCGCCGAGCCTGACCGCAAG
GTGGTCAAGGCGGCGGTGAAGGCGGGCAAGTCGCAAGGAGCCAAGATTGC
CAGCCGTGTGATTGAACCGGCGGTGGCGGATTCCTGGGCGGCCAAGGCGG
AGGAGTTGGCGGACGAGGTGGAAGAGGTGTTGTCGGAGGAGAAGCTCGAG
AAGCAGCTGGCACAGGCGGAGATGCAAGTGACCAAGGGAGAGAACCTGAT
CAAGCACGAGGCGGAGATCAAGTCGCGGCCGAAGCGTACTTGGTTCGAGA
CGGAGCGCGACAAGAAGGCGGCGCGGAAGCTGGGCGCGGCGGAGCTCAAC
GGGCCCGATGCCGGCATGTCCAAGAAGGAGAAGCAGAAGCTCAGCAACAA
GGACAAGAAGCGTCTGGATGATTCCCGTCAGCGCCAGGAAGCGGGTGCTG
GTTGGAAGAAGGGCCGGGCAACACGGGAGAGCATGAAGAATGGGCAATTG
CCCAAAGCTAAGAAGGACAACAAGAAGAAGGGCAAGAAATGAATGGCCGG
AACGAAAAAGCGCGCGAACGCCGACGACGACTTCGTGCTCACATTGTCGG
ACGATGAGAATGACACGTTAAATCAGCTCGAAGAGGAGGGCGAGGGCGAC
GATGGTGCGCTAGCCACGGGATCGAAAACGAAGAAGCGCAAGAGAGATGA
TGCTGCGGCGGCGCAGCAGGAGAAGGGGAAGAACAAGAAGGTGAAGAAGC
AGGAACAACAGCAACAACAAGCACAACAGAAGAAAAAGAAGGGAAAGAAT
GCCCCTGTTCAGGAGGAAGAGGATGAGGATGAAGAGGAGGAAGAGGATCA
GGGTGAAGATGATGGCGCGCTTAATTCGGATTTCGAGTTCGATGTCGGCG
GTGCTGCGAATGAGGTTAGGGATTTCGATGGGTGGGAGGTTAATGGTAAT
GAGGAGGGTAAGGGTGGGGATAAGAAGGCTGTGGATATCGATGATATTAT
TTCGAGGAGGCAGGCGAAGAAGGAGGCTGAGTTGATTCGCAAGCAGAAGA
AGAAGAAGCAGAAGCAAGAGGAGGAGTTTAGTGAATTGGAGGATGATGAT
GAGGAGGATGGTGGTATGGAGGTCGACTTTGGGGATGATGAGCTGCTTGC
GGAGGATGGGTTCGGTATGGGTGTCGATGGGGAGGAGGAGAGCGAGAAGT
CCGATGCGGAGGATGAGGAGAAGGAAGAAGGGTCTGATGAGGAGGCTGAG
GGCAGTGATGAAGACGAGCAGATGGATGAGGATGATGACGATGCTGCTTC
GGATGACGACTCGGTTGCTACTCCTGTCATGCACCCGGATGATATTGCCT
CTGATCGGGACTCGGACGAGGAGAGTCAGGTCGACGCCGAGGAAGAGGAG
AAGCGCAAGGCTTTCTTCGCGCCCGAGGAGGAAAAGACTTCCGAGTCTGC
TATGGCAGATGCGAAGCGGTCGTTCCAGGAATTCAACCTCTCTCGTCCCA
TCCTTCGTGGTCTCGCCGGAGTCAACTTCTCGAACCCTACACCCATTCAG
CGCAAGACGATCCCCGTGGCTCTCCTGGGCAAGGATATTGTCGGTAGTGC
CGTTACTGGTTCCGGAAAGACTGCCGCCTTCGTTGTCCCGATTCTCGAAC
GTCTGCTGTTCCGGCCGCGCAAGGTCCCGACGAGTCGTGTTGCCATTCTC
ATGCCCACCCGTGAATTGGCGGTGCAGTGCTACAATGTCGCTACAAAGCT
GGCCACATACACGGACATCACCTTCTGTCAGCTGGTCGGTGGTTTCAGTC
TTCGCGAGCAGGAGAACATCTTGAAGAAGCGTCCCGATGTGATCATCGCC
ACCCCCGGTCGTTTCATTGATCACATGCGCAACTCGGCCAGCTTCACCGT
TGATACTCTGGAAATCCTGGTTCTGGATGAAGCCGACCGCATGCTCGAGG
ACGGTTTCGCCGACGAGTTGAACGAGATTCTCACTACGATCCCCAAGTCG
CGCCAGACTATGCTTTTCTCGGCTACGATGACGGACACTGTCGACAAGCT
CATTCGCGTCGGTCTCAACCGCCCCGTGCGCTTGATGGTCGACGCCAAGA
AGAACACGGCCGTGACACTGGTGCAGGAATTCGTGCGTCTGCGCCCCGGA
CGTGAGGACAAGCGACTAGGCTACCTTCTCTACCTCTGCAAAGAGATCTA
CACCGGTCGGGTGATTGTCTTCTTCCGACAGAAGAAGGAGGCGCACCGGG
TGCGTATCATCTTCGGACTGCTGGGCTTGAAGGCTGCCGAGCTCCACGGT
AGCATGAGCCAAGAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519221.2 |
| Note | SMCOG1122:ATP-dependent RNA helicase |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | nucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851922.1 | supercontig | KZ851922.1:470556..473396 - |
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