You are here

Home

M747DRAFT_372278-T1, M747DRAFT_372278-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_372278-T1
Unique NameM747DRAFT_372278-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851926.1:398620..400080+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_372278-T1 ID=M747DRAFT_372278-T1|Name=M747DRAFT_372278-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1461bp|location=Sequence derived from alignment at KZ851926.1:398620..400080+ (Aspergillus niger ATCC 13496)
TGCAGGGGGTGACGGGAGTGTGTCAACAGACATCTTTGGCCATCTTCTTT
CTCCGTCAAATACTACTTAACGCTTGTTTTCGGTAGCATTGAAATTCCAA
TTTTCCCCCTTCTTCTATCTCTTTCTCTCTTCCCATCTTCCCATGATGAG
ACTCGCGCGTACAGTATACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTG
CGGATATCGAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGG
GATGAGTTTACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGC
TTCACTCGTACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGG
GATCCCATGTGCGTGCTCTGTCAATATTCTCGCCCCTTAAGCAAACTCTA
CTAATACCCACGTCTTTGATACAGGAGGACATAGCTCTCCTCGCGAAAAA
CGCGCTTTTTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGG
TTGGCGGCAATGATGCAAACGCATAGTAAGGCTTCTTCCATAGCTCCCAT
GAAACGCGACAGCAGGTTTCGACCTCAGCTGTAACGTCCCTTTCACTGCT
GACAATTGCACCTCGTGCAGCTTCCTTAGGATTGCCGCTTCTGGTCCTGA
TGCCTCTGTTGTCAACTACTCGGATCGCTTCACCCTCACGAACATGACCG
GATCATTCTCCCCGACGGTTATCAATGGAATTCCTTCCGCTATGTACCCT
ACAGACTCCTTTCCCCCGGCCCATATGGATGAAAGTCACGAAGAATTACG
GAAGAGGCAGGTGGCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTG
GACCTACAAGATACGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCG
GTGGGAACACCAACCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTAC
AACATATCTACCTCAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAA
CATACTCCGTTATTAGCATTGAGAATACAGTAAGTATAGCGTGGCTGGGT
TTTGTCACGATTGATTCTGTTCTTCTCTTCTCAAAGCTTGCGAATCTGGG
CTAATGGCACTCCATTTCACAGGCATCTCCAGCACCGCATGCCGGAGACA
CAAAAATGAAACGGTTTTTGGAAAGATGGAAAGATTGAGGCGTTTGACAA
TTCTGAGCTGTAAGGTCTAGACGTGCATGGCCTATTGCCTGATCGTTACA
AGGCTTCCTCCCTACTTAGCATGCTTTCATGATAGCCTGTATGGGGCGTT
CCCGAGCTAGAACGGAGCTCGAGAATATATATTGCACCTAACGCCAGGCA
TTTCCCAACTATGTTTGTTTGCATCAATGTGATTACTATTATACTGGACA
ATGCTGGCCTCTTGGAGTTTATCTTAATCAGCAAGCCTACTACAGGTAAT
AATTTTGATAT
back to top

Coding sequence (CDS) from alignment at KZ851926.1:398620..400080+

>M747DRAFT_372278-T1 ID=M747DRAFT_372278-T1|Name=M747DRAFT_372278-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3168bp|location=Sequence derived from alignment at KZ851926.1:398620..400080+ (Aspergillus niger ATCC 13496)
ATGATGAGACTCGCGCGTACAGTATACTTAGTGCTGTCACTTCTCTCAGC
TGCTCTTGCGGATATCGAATTCATCGACCCAGCAGCCGGCACAGTCATCA
GAGCTGGGGATGAGTTTACTGCTCACTGGAGGGATTCCGGCACATTACCC
CGGCTTGCTTCACTCGTACAGTATGACCTCTATCTTTGTGCAGGCGGAGA
CACAGTGGGATCCCATGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTT
TTGCCAAGGGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGC
AATGATGCAAACGCATACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGC
CTCTGTTGTCAACTACTCGGATCGCTTCACCCTCACGAACATGACCGGAT
CATTCTCCCCGACGGTTATCAATGGAATTCCTTCCGCTATGTACCCTACA
GACTCCTTTCCCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAA
GAGGCAGGTGGCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGAC
CTACAAGATACGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTG
GGAACACCAACCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAAC
ATATCTACCTCAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACAT
ACTCCGTTATTAGCATTGAGAATACAGCATCTCCAGCACCGCATGCCGGA
GACACAAAAATGAAACGGTTTTTGGAAAGATGGAAAGATTGAATGATGAG
ACTCGCGCGTACAGTATACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTG
CGGATATCGAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGG
GATGAGTTTACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGC
TTCACTCGTACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGG
GATCCCATGAGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAG
GGCAACTCAGTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGC
AAACGCATACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTG
TCAACTACTCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCC
CCGACGGTTATCAATGGAATTCCTTCCGCTATGTACCCTACAGACTCCTT
TCCCCCGGCCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGG
TGGCTGGACCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACAAGA
TACGCACCCATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACC
AACCCCCCAATATCCAACGAGCGCGTATTCCGTTGCTACAACATATCTAC
CTCAGGCTACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTT
ATTAGCATTGAGAATACAGCATCTCCAGCACCGCATGCCGGAGACACAAA
AATGAAACGGTTTTTGGAAAGATGGAAAGATTGAATGATGAGACTCGCGC
GTACAGTATACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTGCGGATATC
GAATTCATCGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTT
TACTGCTCACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCG
TACAGTATGACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCAT
GAGGACATAGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAACTC
AGTTACGTTTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGCAT
ACTTCCTTAGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTAC
TCGGATCGCTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGT
TATCAATGGAATTCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGG
CCCATATGGATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGA
CCCTTTACGATTCCCTATCAGTTGCAGACTGGACCTACAAGATACGCACC
CATGGCTAAGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCC
AATATCCAACGAGCGCGTATTCCGTTGCTACAACATATCTACCTCAGGCT
ACTGTTCAGATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCAT
TGAGAATACAGCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAAC
GGTTTTTGGAAAGATGGAAAGATTGAATGATGAGACTCGCGCGTACAGTA
TACTTAGTGCTGTCACTTCTCTCAGCTGCTCTTGCGGATATCGAATTCAT
CGACCCAGCAGCCGGCACAGTCATCAGAGCTGGGGATGAGTTTACTGCTC
ACTGGAGGGATTCCGGCACATTACCCCGGCTTGCTTCACTCGTACAGTAT
GACCTCTATCTTTGTGCAGGCGGAGACACAGTGGGATCCCATGAGGACAT
AGCTCTCCTCGCGAAAAACGCGCTTTTTGCCAAGGGCAACTCAGTTACGT
TTAAGATTGATTCCGAGGTTGGCGGCAATGATGCAAACGCATACTTCCTT
AGGATTGCCGCTTCTGGTCCTGATGCCTCTGTTGTCAACTACTCGGATCG
CTTCACCCTCACGAACATGACCGGATCATTCTCCCCGACGGTTATCAATG
GAATTCCTTCCGCTATGTACCCTACAGACTCCTTTCCCCCGGCCCATATG
GATGAAAGTCACGAAGAATTACGGAAGAGGCAGGTGGCTGGACCCTTTAC
GATTCCCTATCAGTTGCAGACTGGACCTACAAGATACGCACCCATGGCTA
AGAAGCCTGGAAGTACGATTCCGGTGGGAACACCAACCCCCCAATATCCA
ACGAGCGCGTATTCCGTTGCTACAACATATCTACCTCAGGCTACTGTTCA
GATGACACTGTCCGCCTCAGAAACATACTCCGTTATTAGCATTGAGAATA
CAGCATCTCCAGCACCGCATGCCGGAGACACAAAAATGAAACGGTTTTTG
GAAAGATGGAAAGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042546cell wall biogenesis
GO:0006078(1->6)-beta-D-glucan biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_372278M747DRAFT_372278Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372278-T1M747DRAFT_372278-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372278-T1.utr5p1M747DRAFT_372278-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372278-T1.exon1M747DRAFT_372278-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_372278-T1.exon2M747DRAFT_372278-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_372278-T1.exon3M747DRAFT_372278-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_372278-T1.exon4M747DRAFT_372278-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372278-T1.cdsM747DRAFT_372278-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372278-T1.utr3p1M747DRAFT_372278-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR018466
DBxrefInterPro:IPR008659
DBxrefPFAM:PF05390
DBxrefPFAM:PF10342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851926.1supercontigKZ851926.1:398620..400080 +
Powered by Drupal