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M747DRAFT_372352-T1, M747DRAFT_372352-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_372352-T1
Unique NameM747DRAFT_372352-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:173532..175599-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_372352-T1 ID=M747DRAFT_372352-T1|Name=M747DRAFT_372352-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2068bp|location=Sequence derived from alignment at KZ851927.1:173532..175599- (Aspergillus niger ATCC 13496)
GTTCAACTAATTGCTTGTCAACGGTGTTTCTGTTGGCATTCTTTTGTTTG
GACCTTCGAGGAATTTGTGATTTCCTCTTTTGTGTCTATATTGGTTCGAG
TTCGCTGTGTAGGTTGATCAATCGCCTGCGGCAGGATCTTCGATCTATCT
CTTTTCTTTCTTTCTCTTTTTGACTATCTGATTTACGATTGATTGCTCTC
ACGATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAGTCGCTGC
TCAGTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGATCGCATAT
CGAAGCTTGCGCGTATGCAGCTTGAAGAGGCGCAGGGTGATTTGAAGGCT
GCGCAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTGCGGATGA
TGCTATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGAAGAAGAAGGAGG
GTGCTGCAGAGTGAGTTGTCCCGTTGTATACCATTGGGTTTGGTTCGCGT
CGGGCAATGAGGGACGAATGCTAACATATTTGATGATGAAAGTGACGACG
ACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACGAGGTCGAC
GAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCGCTCGCTTA
TCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCCGGAGGAGG
AAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATAACCTGCTG
TTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTCTACGTCTA
CGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCATGCTGCCCG
CTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCAAGACGGCC
GAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATGGAACCCGA
CATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCCCAACGCGA
TCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGAAGTCCAAG
AAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCGATCCTCGC
TCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGGATCTGCCG
ACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCGCCAAGTCG
TACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCACCCGACCGA
ATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGTGGCAGCGG
ACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATGCGGATGTC
GAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTACGTGACGAC
GGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCCCGCCTCGC
CCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACTCGTCGGTG
TCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTGACCGGGTC
AACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAAGCCCAGCA
TGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGACCACTTTC
GCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGCAGCAAGGG
CGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCGTCGGGCGT
TCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAACGTCTGGTC
GGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGCGTGCAGGA
GGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGATGAGGATT
GAGTAGATGCAAAACAAAGAAAAGAAAGGAAGCCTAAAAATGGACGCCTT
CAGGTTGGATGACTGCAACAAAAACAAGATAAAAAAGAAAGAATGAATCT
ACGGAGTTCTACTTATAGATAGATAGTTTGAGTGTGACGCTTTTTGCAAT
GAAAACGTTGTGATACCC
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Coding sequence (CDS) from alignment at KZ851927.1:173532..175599-

>M747DRAFT_372352-T1 ID=M747DRAFT_372352-T1|Name=M747DRAFT_372352-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3234bp|location=Sequence derived from alignment at KZ851927.1:173532..175599- (Aspergillus niger ATCC 13496)
TGACGACGACGACCTGAAGGAATACGATCTGGATCACTACGATAGCGACG
AGGTCGACGAGGACGGCGAGAAGATCACCATGTTCGGCAATGTCAAGTCG
CTCGCTTATCACCAGCCCAACGAGGAGGACCCGTACCTGGTTATGCCGCC
GGAGGAGGAAGACGAGGAGAGAGAGGAACTGCAGATTATGCCGACGGATA
ACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGGTTGCTCATCTGGAAGTC
TACGTCTACGAGGATGCCGCCGACAACCTTTACGTGCACCACGATATCAT
GCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTTGGACATCCCCGTTGGCA
AGACGGCCGAGGGCCGCACTACCGGTAACTTCGTGGCTATCGGAACAATG
GAACCCGACATTGAGATCTGGGACCTCGATGTCGTCGACAGCATGTACCC
CAACGCGATCCTGGGCCAGGGTGGTGCCGATGCCGAGAACGGCGCGAAGA
AGTCCAAGAAGAAGAAGGCCAAGGCCAACGACGAATATCACATCGACTCG
ATCCTCGCTCTGGCTGCGAACCGCCAGCACCGCAACCTCCTGGCCTCTGG
ATCTGCCGACCGCACCGTCAAGCTCTGGGATCTCCAGACCACCAAGTGCG
CCAAGTCGTACTCCCACCACACCGACAAGGTGTGCGCGCTGGAGTGGCAC
CCGACCGAATCGACCGTCCTGCTGAGCGGTAGCTACGACCGCACGGTGGT
GGCAGCGGACATGAGAGCCCCCGACTCCAAGGCGCGCTGGGGCGTGGATG
CGGATGTCGAGAACGTGCGCTGGGACGTGCACGACCCGAACTACTTCTAC
GTGACGACGGACGCCGGTATGGTGTACCGCTACGATGTGCGGAACATTCC
CGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGACGCTGCAGGCGCACGACT
CGTCGGTGTCGTCGTTCGACGTCAACCCCACCGTGCCGGGCTACCTGGTG
ACCGGGTCAACGGACAAGTCCGTTAAGCTCTGGAACATTGAGAACGACAA
GCCCAGCATGGTGGTGTCTCGCAAGATGGAAGTGGGCAAGATCTTCTCGA
CCACTTTCGCGCCGGATGCTGATGTGAGCTTCCGCCTGGCTGTGGCGGGC
AGCAAGGGCGTGGTCCAGATCTGGGATACCTCCACTAACGCGGCGGTGCG
TCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGAGGGCGAGGTGCAGGAAC
GTCTGGTCGGTATTCAGCCCGACCAGGATGAGTCGGATGAGGAGGAAGGC
GTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGATGGCTGGGAATCGATGGA
TGAGGATTGAATGTCTATGATTACCACTTCCGCTTGGGTGCGGCGCGGAG
TCGCTGCTCAGTTCCCTACGAAATATGAGATCAATGAGGAGGAAATGGAT
CGCATATCGAAGCTTGCGCGTATGCAGCTTGAAGAGGCGCAGGGTGATTT
GAAGGCTGCGCAGGAGGATGAGGAGATGGAGGAGGATAAGAAGGAGGGTG
CGGATGATGCTATGGAGGATGATTCCAAGGAAGAGGAGGAGGAGAAGAAG
AAGGAGGGTGCTGCAGATGACGACGACGACCTGAAGGAATACGATCTGGA
TCACTACGATAGCGACGAGGTCGACGAGGACGGCGAGAAGATCACCATGT
TCGGCAATGTCAAGTCGCTCGCTTATCACCAGCCCAACGAGGAGGACCCG
TACCTGGTTATGCCGCCGGAGGAGGAAGACGAGGAGAGAGAGGAACTGCA
GATTATGCCGACGGATAACCTGCTGTTGGCGGGTAAGGTTGAGGACGAGG
TTGCTCATCTGGAAGTCTACGTCTACGAGGATGCCGCCGACAACCTTTAC
GTGCACCACGATATCATGCTGCCCGCTATTCCGTTGGCGCTAGAGTGGTT
GGACATCCCCGTTGGCAAGACGGCCGAGGGCCGCACTACCGGTAACTTCG
TGGCTATCGGAACAATGGAACCCGACATTGAGATCTGGGACCTCGATGTC
GTCGACAGCATGTACCCCAACGCGATCCTGGGCCAGGGTGGTGCCGATGC
CGAGAACGGCGCGAAGAAGTCCAAGAAGAAGAAGGCCAAGGCCAACGACG
AATATCACATCGACTCGATCCTCGCTCTGGCTGCGAACCGCCAGCACCGC
AACCTCCTGGCCTCTGGATCTGCCGACCGCACCGTCAAGCTCTGGGATCT
CCAGACCACCAAGTGCGCCAAGTCGTACTCCCACCACACCGACAAGGTGT
GCGCGCTGGAGTGGCACCCGACCGAATCGACCGTCCTGCTGAGCGGTAGC
TACGACCGCACGGTGGTGGCAGCGGACATGAGAGCCCCCGACTCCAAGGC
GCGCTGGGGCGTGGATGCGGATGTCGAGAACGTGCGCTGGGACGTGCACG
ACCCGAACTACTTCTACGTGACGACGGACGCCGGTATGGTGTACCGCTAC
GATGTGCGGAACATTCCCGCCTCGCCCAAGGAGTCCAAGCCCGTGTGGAC
GCTGCAGGCGCACGACTCGTCGGTGTCGTCGTTCGACGTCAACCCCACCG
TGCCGGGCTACCTGGTGACCGGGTCAACGGACAAGTCCGTTAAGCTCTGG
AACATTGAGAACGACAAGCCCAGCATGGTGGTGTCTCGCAAGATGGAAGT
GGGCAAGATCTTCTCGACCACTTTCGCGCCGGATGCTGATGTGAGCTTCC
GCCTGGCTGTGGCGGGCAGCAAGGGCGTGGTCCAGATCTGGGATACCTCC
ACTAACGCGGCGGTGCGTCGGGCGTTCGTCTCGCGGGTGCCTACCCTGGA
GGGCGAGGTGCAGGAACGTCTGGTCGGTATTCAGCCCGACCAGGATGAGT
CGGATGAGGAGGAAGGCGTGCAGGAGGTTGGAGCGGCGCAAGGTGCGGAT
GGCTGGGAATCGATGGATGAGGATTGAATGTCTATGATTACCACTTCCGC
TTGGGTGCGGCGCGGAGTCGCTGCTCAGTTCCCTACGAAATATGAGATCA
ATGAGGAGGAAATGGATCGCATATCGAAGCTTGCGCGTATGCAGCTTGAA
GAGGCGCAGGGTGATTTGAAGGCTGCGCAGGAGGATGAGGAGATGGAGGA
GGATAAGAAGGAGGGTGCGGATGATGCTATGGAGGATGATTCCAAGGAAG
AGGAGGAGGAGAAGAAGAAGGAGGGTGCTGCAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_372352M747DRAFT_372352Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372352-T1M747DRAFT_372352-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372352-T1.cdsM747DRAFT_372352-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372352-T1.utr3p1M747DRAFT_372352-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372352-T1.exon2M747DRAFT_372352-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_372352-T1.exon1M747DRAFT_372352-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372352-T1.utr5p1M747DRAFT_372352-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261DW8
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductrRNA processing protein Pwp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:173532..175599 -
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