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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851927.1:182981..184767- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_372356-T1 ID=M747DRAFT_372356-T1|Name=M747DRAFT_372356-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1787bp|location=Sequence derived from alignment at KZ851927.1:182981..184767- (Aspergillus niger ATCC 13496)
CAGCGCGAAAAATTAGACGTGATCCGCAGCAATATCGGCCACGGTCTTGC
TCTACGATCAGCGCTATCAATCGTTGCGCTCCTCCTGCAGTTTCTCTTCC
CTCCGCTGCCAACAAACAGCTCTCTAGACCACCCAAGCCAATATAACGAT
CCTAAATTCAACGCTAACACCAAGGGTGTTAGCTTCTTTTATCTTTTTGA
CTGGCTCTCCCAATCCTTATACCTTTATTGGTTTGTCGTAGCTTACTCCC
GCTTCATCACCCTCTGGGCCGGCCATGTCGTCGAGGGGACCTTGATCTGC
GGACAAACGGAGTGGGCGACTACGCAGCGCCAAAAGTACAGGCGACAACA
CTTTACTGGCAGCCAGAAGATCTTATGGACGTACCGAAACACTCAGCCAA
GTCTTACAAAATGTCCGACAAGATTAGCTTATTACCTCTGGAACTCATCC
TTCACATACTCTCCTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAA
ACATCTCGCACCAACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACG
ATTAGGAGTTTTTGAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGG
CTGGCTGGACCACCCCGGATCAAATGGCACAGATTTCCAGTCACAATAAA
CAAGCGAACGACTACACAATATCCATCATCCAACCTGCTATGAGCCGGCT
TGCAAGCGACCTGGACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAA
GACGGTGCCCAGCACTACTCGAAAAATCCCGGACATTGGAGCAGATGACT
CGGGAGCAGAACAGGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGG
CCTTAGGAAACTGGAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCA
TGGCTCTAGCTTCTAAATGCCAGAATATATTGCATCATCTAGCATTGCGC
TTCGAGCATCCACATATTCGGGATGGCCCCATCAGACCCAGCACTTGGAT
GAATCCTGCCCCAGGAAGTACGGCATGGAACATGTTCCTCGGTATAGGAC
GGTACCCACAATTTGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGG
GCGGGCATCACTCCGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAA
GCTGACTGTTCTCAAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTC
TAAACTGGCTAGGTGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGAT
GAGGACAGTCTAGCTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAA
TTGCCACCAGATACTTGCCCATCCCATCGAAAACTATGAGCACCTGCCCG
ACGAAATCTGCGACTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTG
CGTGTAAGTGGAATCTTGTCCCGTGATACCTGCATTCAACCAGCTGACAG
AGTTATCTTGACAGTCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCC
GAATACATTGACAGAGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCAT
CTTGCCTTATTCGGGTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTG
GATTGTTGTAGTCCACACCGGTTGGCTTATTTTTCTTTTTTTTCTTGGAG
GGTTGGAGGCATCTTGGTGTTGCTTCTTGCAGGTGACTGGAGAGGGATTC
TCGTTTACTGTGTTTTTGAAGATAGACCATTATGTGCAAACACCTGCATG
TCTGTGCTGATGCTACAAAATAATGTAAATCAAATAC back to topCoding sequence (CDS) from alignment at KZ851927.1:182981..184767- >M747DRAFT_372356-T1 ID=M747DRAFT_372356-T1|Name=M747DRAFT_372356-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851927.1:182981..184767- (Aspergillus niger ATCC 13496)
TCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCCGAATACATTGACAG
AGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCATCTTGCCTTATTCGG
GTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTGGATTGTTGTAGATG
GACGTACCGAAACACTCAGCCAAGTCTTACAAAATGTCCGACAAGATTAG
CTTATTACCTCTGGAACTCATCCTTCACATACTCTCCTACCTTCCCTTCG
AGTCCTTGCTTGCCTTCGGCGAAACATCTCGCACCAACTATGAGTCCCAT
ACCCTCTGTCTTGAGTGTCTACGATTAGGAGTTTTTGAGAAGCGCATCCA
CTCTGTGATTTCCTTACTCCAGGCTGGCTGGACCACCCCGGATCAAATGG
CACAGATTTCCAGTCACAATAAACAAGCGAACGACTACACAATATCCATC
ATCCAACCTGCTATGAGCCGGCTTGCAAGCGACCTGGACAGCAAGCCTCT
GCTAAAAATCAAAAGCTTGAAAAGACGGTGCCCAGCACTACTCGAAAAAT
CCCGGACATTGGAGCAGATGACTCGGGAGCAGAACAGGGTCTTTGCCCAA
GTGGTGAATCGGTATGGTCGAGGCCTTAGGAAACTGGAGTTCATGGCGTA
TGATCTTGACAGCGAGGGTGCCATGGCTCTAGCTTCTAAATGCCAGAATA
TATTGCATCATCTAGCATTGCGCTTCGAGCATCCACATATTCGGGATGGC
CCCATCAGACCCAGCACTTGGATGAATCCTGCCCCAGGAAGTACGGCATG
GAACATGTTCCTCGGTATAGGACGGTACCCACAATTTGGCCTTTGCGGGC
TACAGACTTTGATCCTGGAGCGGGCGGGCATCACTCCGTGGCAGTTGACC
ATGCTTGTGAAGAAAAACCCCAAGCTGACTGTTCTCAAACTGAGAACATG
TCGCGGTGTGCAGCCCGAGTTTCTAAACTGGCTAGGTGGAGTGTACTACG
AGCCAGAAGAGCTAGGGAGCGATGAGGACAGTCTAGCTCCTGGTCGGAAT
CTGAAAGTGCTGTGGTTGGAAAATTGCCACCAGATACTTGCCCATCCCAT
CGAAAACTATGAGCACCTGCCCGACGAAATCTGCGACTTTGGTCTTGGAT
GGGTTAGAGGTCTGACTAGCTTGCGTTCTCTATCTTTCAGCGAGAGCGCG
AATATCCCGCCCGAATACATTGACAGAGCTAATAGTGTGCTTTGGAAGAT
ACCAGAAGTCATCTTGCCTTATTCGGGTCATGGGGACAAAGCCCCCATCG
AAGTTGATCCTGGATTGTTGTAGATGGACGTACCGAAACACTCAGCCAAG
TCTTACAAAATGTCCGACAAGATTAGCTTATTACCTCTGGAACTCATCCT
TCACATACTCTCCTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAAA
CATCTCGCACCAACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACGA
TTAGGAGTTTTTGAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGGC
TGGCTGGACCACCCCGGATCAAATGGCACAGATTTCCAGTCACAATAAAC
AAGCGAACGACTACACAATATCCATCATCCAACCTGCTATGAGCCGGCTT
GCAAGCGACCTGGACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAAG
ACGGTGCCCAGCACTACTCGAAAAATCCCGGACATTGGAGCAGATGACTC
GGGAGCAGAACAGGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGGC
CTTAGGAAACTGGAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCAT
GGCTCTAGCTTCTAAATGCCAGAATATATTGCATCATCTAGCATTGCGCT
TCGAGCATCCACATATTCGGGATGGCCCCATCAGACCCAGCACTTGGATG
AATCCTGCCCCAGGAAGTACGGCATGGAACATGTTCCTCGGTATAGGACG
GTACCCACAATTTGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGGG
CGGGCATCACTCCGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAAG
CTGACTGTTCTCAAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTCT
AAACTGGCTAGGTGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGATG
AGGACAGTCTAGCTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAAT
TGCCACCAGATACTTGCCCATCCCATCGAAAACTATGAGCACCTGCCCGA
CGAAATCTGCGACTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTGC
GT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR032675 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | F-box domain protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851927.1 | supercontig | KZ851927.1:182981..184767 - |
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