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M747DRAFT_373054-T1, M747DRAFT_373054-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373054-T1
Unique NameM747DRAFT_373054-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851933.1:303383..304121-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373054-T1 ID=M747DRAFT_373054-T1|Name=M747DRAFT_373054-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=739bp|location=Sequence derived from alignment at KZ851933.1:303383..304121- (Aspergillus niger ATCC 13496)
CAGAAACCAATTGCTGTACCAGCTTAAGTTCAAAATGGATTCTCAACCGT
CATCGAAAGCGCTTCATTGTAAGCCGTACCCTGCATTTTTCACTTACCTC
AGTTCCAAACCCCTCCATTGCACCGCTAACAACCATCCGTCGCAGATCGC
ATCAACACCAACATCTCACAATTACTCCAACGCTTCGAGAACATCATGGC
AACAGCGACTGTTAGCTCACCTCACCCTCTTGCAATATATCCAAACGAAC
AACCACTAACCCAGAAATCCAGACCGAAAGTACCAGCCACACCTCCACGG
CCGTCGAGACATACCAGCTAGACGTGGAATCCACAGCGTTGGTACGCCTC
AACTAATGCTCCTCTATTCCAACACAAATCCTACAATGTCAGGGAACACT
TGCTTACAGAATTGAATCTGAGATAGGTCCGCGCAGCAGAAGACATCCTC
GCCCTGACCCGGACAATGAAAGAAACCTGGTTATTCGGGAAACTCGACAC
ACTAGGCGAAGACGAAGCGGACGTGAAACGTCGCGAGGAATTAGAGATGA
ATGCGGAGGCGATTCAGAAGGCCATTGAAGATGGGGGGTTTTTGAAGGCT
GCTAAGTGAGGGTCAGCTTTGAGGTGTATACTGTGGGTGCATGGCGTATA
GTGGGTTGGTTTATCTATTGTATGGAGTTGGTGGGTTGGCGTTCGGGTAT
GCTTCTAGAAAGTGGTACTTCTAAATTCTGATGTTGATG
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Coding sequence (CDS) from alignment at KZ851933.1:303383..304121-

>M747DRAFT_373054-T1 ID=M747DRAFT_373054-T1|Name=M747DRAFT_373054-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1404bp|location=Sequence derived from alignment at KZ851933.1:303383..304121- (Aspergillus niger ATCC 13496)
GTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAAC
CTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTGA
AACGTCGCGAGGAATTAGAGATGAATGCGGAGGCGATTCAGAAGGCCATT
GAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGCCA
CACCTCCACGGCCGTCGAGACATACCAGCTAGACGTGGAATCCACAGCGT
TGATCGCATCAACACCAACATCTCACAATTACTCCAACGCTTCGAGAACA
TCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTCAT
TGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAA
CCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTG
AAACGTCGCGAGGAATTAGAGATGAATGCGGAGGCGATTCAGAAGGCCAT
TGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGCC
ACACCTCCACGGCCGTCGAGACATACCAGCTAGACGTGGAATCCACAGCG
TTGATCGCATCAACACCAACATCTCACAATTACTCCAACGCTTCGAGAAC
ATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTCA
TTGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAA
ACCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGT
GAAACGTCGCGAGGAATTAGAGATGAATGCGGAGGCGATTCAGAAGGCCA
TTGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGC
CACACCTCCACGGCCGTCGAGACATACCAGCTAGACGTGGAATCCACAGC
GTTGATCGCATCAACACCAACATCTCACAATTACTCCAACGCTTCGAGAA
CATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTC
ATTGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGA
AACCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACG
TGAAACGTCGCGAGGAATTAGAGATGAATGCGGAGGCGATTCAGAAGGCC
ATTGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAG
CCACACCTCCACGGCCGTCGAGACATACCAGCTAGACGTGGAATCCACAG
CGTTGATCGCATCAACACCAACATCTCACAATTACTCCAACGCTTCGAGA
ACATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTT
CATT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373054M747DRAFT_373054Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373054-T1M747DRAFT_373054-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373054-T1.cdsM747DRAFT_373054-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373054-T1.utr3p1M747DRAFT_373054-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373054-T1.exon4M747DRAFT_373054-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_373054-T1.exon3M747DRAFT_373054-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_373054-T1.exon2M747DRAFT_373054-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373054-T1.exon1M747DRAFT_373054-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373054-T1.utr5p1M747DRAFT_373054-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038427
DBxrefInterPro:IPR009332
DBxrefPFAM:PF06179
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851933.1supercontigKZ851933.1:303383..304121 -
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