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M747DRAFT_373139-T1, M747DRAFT_373139-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373139-T1
Unique NameM747DRAFT_373139-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:224398..225368-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373139-T1 ID=M747DRAFT_373139-T1|Name=M747DRAFT_373139-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=971bp|location=Sequence derived from alignment at KZ851934.1:224398..225368- (Aspergillus niger ATCC 13496)
ATGAAATCATCGCAAAGGACCGACGACTTGCACAACAGTCAACAACGTTT
CGCACGGAATATACGCAACGACTGAAGCCATTGCACGAGGCAGTTCTCAT
CGGATGGGAGAACATGGCTGACTGGGATCCTTAGGGCGTCTCACCGAGTA
CCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGC
TGTACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGG
TTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGA
GATCGTCAGCATCAATGTGGTATGTGTGGCCGTTATCAAGCGACAACTCG
GCAGTGTTGGCTGACGCCTGTCTTTTTTCCCCATCCAATAGATCAGCGAG
AAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGGCTCCGCTACGACTC
CCGCTCCGGCACCCACAACATGTACAAGGAGTTCCGTGAGATGAGCCGCA
CCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTGCCCGCCACCGTGCC
CGCTTCGGCTCCATCCACGTATGTTGAGATTCCTATCCTCTTTTGCTGAG
GAATATTGCGATCTAACTACGTTCCTACAGATCCTTAAGGTTGTTGAGAT
CGAGAACGCCGACAGCATCCGCCGCCCCTACATCAAGCAGCTCCTCTCCA
AGAACCTCAAGTTCCCCCTGCCCCACCGTGCTGCCCACGGCAAGAAGCTG
TTCGCTTACTCTCGTCCCACTACTTTCGCGTAAATGTGACGTTTTGGGTT
TGGGTGATCGGAGTGTGTGGATGAATGACTATGTTATGGCCATAGCATGC
ACGAAGGACACGGAGCACGCGGACAGGGCGTGTTTCCTCAACCCAGGTAA
TGGGACGGATGGTTTTTATGTCTCTTTAAGTCCTCTGCAGCGACCCTTTC
AAGTTATATCAAAAAATACCG
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Coding sequence (CDS) from alignment at KZ851934.1:224398..225368-

>M747DRAFT_373139-T1 ID=M747DRAFT_373139-T1|Name=M747DRAFT_373139-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2208bp|location=Sequence derived from alignment at KZ851934.1:224398..225368- (Aspergillus niger ATCC 13496)
ATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCCTA
CATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCGTG
CTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCGCG
TAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGGCT
CCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGTTCCGTG
AGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTGCC
CGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGAGTACCAG
GTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTGTA
CCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTTCT
GGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGATC
GTCAGCATCAATGTGATGAAATCATCGCAAAGGACCGACGACTTGCACAA
CAATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCCCC
TACATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCACCG
TGCTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTTCG
CGTAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTATCTGG
CTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGTTCCG
TGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATGGCTG
CCCGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGAGTACC
AGGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGCTG
TACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGGTT
CTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGAGA
TCGTCAGCATCAATGTGATGAAATCATCGCAAAGGACCGACGACTTGCAC
AACAATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCGCC
CCTACATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCCAC
CGTGCTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACTTT
CGCGTAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTATCT
GGCTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGTTC
CGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATGGC
TGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGAGTA
CCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAAGC
TGTACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCCGG
TTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGTGA
GATCGTCAGCATCAATGTGATGAAATCATCGCAAAGGACCGACGACTTGC
ACAACAATCCTTAAGGTTGTTGAGATCGAGAACGCCGACAGCATCCGCCG
CCCCTACATCAAGCAGCTCCTCTCCAAGAACCTCAAGTTCCCCCTGCCCC
ACCGTGCTGCCCACGGCAAGAAGCTGTTCGCTTACTCTCGTCCCACTACT
TTCGCGTAAATCAGCGAGAAGCGCCCTACCAAGGTCAAGAACTTCGGTAT
CTGGCTCCGCTACGACTCCCGCTCCGGCACCCACAACATGTACAAGGAGT
TCCGTGAGATGAGCCGCACCGAGGCTGTTGAGGCTCTCTACCAGGACATG
GCTGCCCGCCACCGTGCCCGCTTCGGCTCCATCCACGGCGTCTCACCGAG
TACCAGGTCATTGGGCGTCACCTGCCCACCGAGGCTAACCCCACGCCCAA
GCTGTACCGCATGCGCATCTTCGCGCCCAACACTGTTGTCGCTAAGTCCC
GGTTCTGGTACTTCCTGACCCAGCTCCGCAAGGTCAAGAAGGCCAACGGT
GAGATCGTCAGCATCAATGTGATGAAATCATCGCAAAGGACCGACGACTT
GCACAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL20AM747DRAFT_373139Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373139-T1M747DRAFT_373139-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373139-T1.cdsM747DRAFT_373139-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373139-T1.utr3p1M747DRAFT_373139-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373139-T1.exon4M747DRAFT_373139-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_373139-T1.exon3M747DRAFT_373139-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_373139-T1.exon2M747DRAFT_373139-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373139-T1.exon1M747DRAFT_373139-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR028877
DBxrefInterPro:IPR023573
DBxrefInterPro:IPR021138
DBxrefPFAM:PF01775
Product60S ribosomal protein L20A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:224398..225368 -
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