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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851936.1:20183..23100+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_373270-T1 ID=M747DRAFT_373270-T1|Name=M747DRAFT_373270-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2918bp|location=Sequence derived from alignment at KZ851936.1:20183..23100+ (Aspergillus niger ATCC 13496)
CATCCATCAATCTCTCGTCGCTGTCTGGTGGAGTCATCCACCCCCATTAT
ATCTTGGTTATCCCCAATACCCTTTCCTCTCACGTCTCGACCATTCAGAG
GGCTGCGTCTGCGCCCTGCCTACCTTTCTTCTGAGCAGAGCCAAGGTCCC
TTGCTCTCTGCCACCCGCGACCTCAGCTTCCCGTCGTCGACTATCGTGCC
AACAAAATGGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATGC
TCAGGCTATTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACTT
CCGGTGCGTTCACCCTCTTTCCGCCCCTAAGGGGATTGGAACTTGCCAAC
ACTCGCATCATGACACCCAGGATCGCAATCGCATCAGGGATCTCCCGAGA
AAAAGACCGAGACTGTTTCGGATACTGATAATCCGCTAGATGCACCCGCT
TCACCCAAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAAGAGATGGG
CGGCACCGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGAGGATCTCG
CTGATGTTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATGAACAGCCG
GCGCAGGCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACATCTCGTTTC
GCAAACCCACGCCATCATCCTCCCCAGCTACTCTACCTGGTTCGACATGC
ACCTCATCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCTTCAACGGC
AGAAACCGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGTGATTTCAT
GATCAACACCTACCGTTTGAACCCCATTGAGTACCTCACAGTCACTGCGT
GCCGCCGCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTGTGCACTCC
TTCCTGGAACAATGGGGTCTCATCAACTACCAGGTAAGTATCTGCCCGGT
GCCGACCTCAGGCCTGAGGTGCTGATACCTTGACTCAGGTGGATCCCCAA
ACGCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGTGGT
CGCCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACCACT
TTGTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCAGCG
ACCCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGTGTA
TGATGATAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACAAGC
AGACCAACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACCAAG
GCGATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTTCTC
TTGCGGCATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAACAC
CCGCAACCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGCCCC
AACTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGACTT
CGTCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATGCGC
CATGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAACTTT
GACGACAACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAAGGA
GGAGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATCTGG
ATGACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGCCAG
GCCGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGCTGA
GCCTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCCGCA
AGGAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAGGGC
AAGGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGAAGT
GGACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTGGTT
CCGACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCTGCC
GCTCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCGCCT
GGTTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGCTGC
AGCAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAACTC
GAGCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAAGCG
CGTCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCCCTG
GTGAGGAGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATTGGC
AACCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCAGCC
ACTGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAATGTA
CCTATGAAAAGGGAATGTTCCACCAATGATGACATGCTTTCTTCCAACAG
CTGGAGAATTCGATAACTCTTTCCTTTCATTTCTAACGACCGGGCGAAGG
AGCCGTACGGGGTTGCTTTTCAATAATATCCATTGTATTGTACAATATCA
TAGGGCTGGGCAGGTGGAGCTATGAAGAAGAATGAATAGTCAGGATGTAT
CTGACACGGACAGACAAGGTGGTAGTAAAGTGATGTGTGATGGATTGATG
GATGGCTTGCACTATGATCTGGTCTGATTATCTTCTTTTTTTTCCTTTTA
CATTCGATTTACAATCCGCTAGGTAGGAAAAGGCGCAAATGTTTTGGGAG
TTCAGAGCTAAGTATTGTACGCGTGTGCCTTGCAAATCGATGTTCTATTG
TTGAAATCACTCCTTGTCTTCGCATGTTAGTAGTTTTTTTTTGGGGTTCG
GTTTCTAGATAGGCCTGG back to topCoding sequence (CDS) from alignment at KZ851936.1:20183..23100+ >M747DRAFT_373270-T1 ID=M747DRAFT_373270-T1|Name=M747DRAFT_373270-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6147bp|location=Sequence derived from alignment at KZ851936.1:20183..23100+ (Aspergillus niger ATCC 13496)
ATGGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATGCTCAGGC
TATTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACTTCCGATG
CACCCGCTTCACCCAAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAA
GAGATGGGCGGCACCGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGA
GGATCTCGCTGATGTTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATG
AACAGCCGGCGCAGGCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACAT
CTCGTTTCGCAAACCCACGCCATCATCCTCCCCAGCTACTCTACCTGGTT
CGACATGCACCTCATCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCT
TCAACGGCAGAAACCGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGT
GATTTCATGATCAACACCTACCGTTTGAACCCCATTGAGTACCTCACAGT
CACTGCGTGCCGCCGCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTG
TGCACTCCTTCCTGGAACAATGGGGTCTCATCAACTACCAGGTGGATCCC
CAAACGCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGT
GGTCGCCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACC
ACTTTGTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCA
GCGACCCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGT
GTATGATGATAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACA
AGCAGACCAACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACC
AAGGCGATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTT
CTCTTGCGGCATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAA
CACCCGCAACCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGC
CCCAACTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGA
CTTCGTCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATG
CGCCATGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAAC
TTTGACGACAACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAA
GGAGGAGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATC
TGGATGACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGC
CAGGCCGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGC
TGAGCCTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCC
GCAAGGAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAG
GGCAAGGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGA
AGTGGACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTG
GTTCCGACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCT
GCCGCTCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCG
CCTGGTTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGC
TGCAGCAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAA
CTCGAGCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAA
GCGCGTCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCC
CTGGTGAGGAGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATT
GGCAACCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCA
GCCACTGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAAA
TGGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATGCTCAGGCT
ATTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACTTCCGATGC
ACCCGCTTCACCCAAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAAG
AGATGGGCGGCACCGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGAG
GATCTCGCTGATGTTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATGA
ACAGCCGGCGCAGGCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACATC
TCGTTTCGCAAACCCACGCCATCATCCTCCCCAGCTACTCTACCTGGTTC
GACATGCACCTCATCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCTT
CAACGGCAGAAACCGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGTG
ATTTCATGATCAACACCTACCGTTTGAACCCCATTGAGTACCTCACAGTC
ACTGCGTGCCGCCGCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTGT
GCACTCCTTCCTGGAACAATGGGGTCTCATCAACTACCAGGTGGATCCCC
AAACGCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGTG
GTCGCCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACCA
CTTTGTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCAG
CGACCCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGTG
TATGATGATAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACAA
GCAGACCAACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACCA
AGGCGATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTTC
TCTTGCGGCATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAAC
ACCCGCAACCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGCC
CCAACTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGAC
TTCGTCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATGC
GCCATGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAACT
TTGACGACAACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAAG
GAGGAGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATCT
GGATGACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGCC
AGGCCGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGCT
GAGCCTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCCG
CAAGGAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAGG
GCAAGGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGAA
GTGGACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTGG
TTCCGACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCTG
CCGCTCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCGC
CTGGTTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGCT
GCAGCAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAAC
TCGAGCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAAG
CGCGTCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCCC
TGGTGAGGAGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATTG
GCAACCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCAG
CCACTGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAAAT
GGAGGACAACCAGGTTATGTCTGGTGGCGCCACTGAGGATGCTCAGGCTA
TTAACGTGGCACAGGATGCCCCAGGTGATGTGATTACCACTTCCGATGCA
CCCGCTTCACCCAAGCCCCAGAATGCCGATGGCGAACCCGAGGATGAAGA
GATGGGCGGCACCGAGACGGAGACGAAGAAGGAGACCGATGGAGGCGAGG
ATCTCGCTGATGTTGCCGCACAGTCCGGCGCTGAAGGTGCTACAGATGAA
CAGCCGGCGCAGGCCAAGGCATCCATTGAGGCCTCTGCGCGCTCACATCT
CGTTTCGCAAACCCACGCCATCATCCTCCCCAGCTACTCTACCTGGTTCG
ACATGCACCTCATCCACCCGATCGAGAAGAAGGCTCTGGCGGAGTTCTTC
AACGGCAGAAACCGTAGCAAGACCCCTGCAGTTTACAAGGATTACCGTGA
TTTCATGATCAACACCTACCGTTTGAACCCCATTGAGTACCTCACAGTCA
CTGCGTGCCGCCGCAACCTTGCTGGTGACGTGTGTGCGATCATGCGTGTG
CACTCCTTCCTGGAACAATGGGGTCTCATCAACTACCAGGTGGATCCCCA
AACGCGTCCGTCCAACATCGGCCCCCCTTTCACTGGCCATTTCCGAGTGG
TCGCCGATACCCCCAGAGGCCTCCAGCCATTCCAGCCCGGACCCAACCAC
TTTGTCAAGCCTGGAAAGCCTCTGCCAGCTACGGATCGTGCAGCATCAGC
GACCCCAGCTGCCAAGGCCGACCTGAACCTCGAGATTCGTCGCAATGTGT
ATGATGATAAGGGCAAGGAGATCACACCTGCCACGGAGGACAAAGACAAG
CAGACCAACGGCGAAGGCTCAACGAACGGTACGACGGGCGATTCGACCAA
GGCGATGGAGAGCGCTTCCAAGGAGCCGAGAAAGAAGTTCAACTGCTTCT
CTTGCGGCATCGATTGTACTCGCCTCAGATTCCACTATGCCAAGGCAACA
CCCGCAACCGCCAACCCAGCCGCACCTGACACCAAGTACGACCTGTGCCC
CAACTGCTTCCTGCAGGGCCGGATGCCCTCCAGCCACAGTGCCTCAGACT
TCGTCAAGCTTGAAGACAGCCCATACTCGATAGCCCCCGATCGGGATGCG
CCATGGTCGGATTCGGAGCTTGTTCTGCTGCTGGAGGGATTGGAAAACTT
TGACGACAACTGGGAACAAATTGCCACTCACGTTGGATCCAGGACAAAGG
AGGAGTGCGTGATGAAGTTCTTGCAGCTGGAGATCGAAGACAAGTATCTG
GATGACATGCCTGAAGTTCGGGCAGGCAGTGGGCGGGAGCCTATCAGCCA
GGCCGAGAACCCTGTCCTGTCCGTTGTCGCTTTCCTTGCACAGATGGCTG
AGCCTGCAGTGGCCGCGGCTGCCGCCGGCCGTTCCGTGGAGGAGATCCGC
AAGGAATTGAGAAAGCAGCTTGAGAAGGGCTCTGGAGCTCAAGACAAGGG
CAAGGAGAAGGAAGGCAGTGCGACAGTCAAGGCTGAGGATTCCATGGAAG
TGGACTCTGCTCGTGAGGAAGCAACCGAGCAAGCCGTCGAGGTTGCTGGT
TCCGACAAGGGCAAGGCTTCCCTTCCCACCGTGGCTCTTGCCGCTTCTGC
CGCTCGTGCTGGCGCCCTGGCTTCTCACGAAGAACGTGAAATGACCCGCC
TGGTTTCCTCGGCCGTCAATGTTACCCTCCAGAAGTTCGAGATTAAGCTG
CAGCAGTTCAATGAGATGGAGGAGATCATCGAAGCCGAACGCCGGGAACT
CGAGCTTGCTCGTCAGCAGCTCTTCCTCGACCGCATGGCCTTTAAGAAGC
GCGTCAAGGAGGTCCAGGACACCCTGCAGGCCGTCAGTCTTCGAGGCCCT
GGTGAGGAGACCAACAACATGCTTGCCGATGCTGCTACGACTGGGATTGG
CAACCGCTATAACTTCCAACCGGCAGGAGGTGACGTTAGAGGCGTGCAGC
CACTGAGTGCAGAAGCAGGCGCTGACTACAAGACGTTGGACCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR041984 |
| DBxref | InterPro:IPR017884 |
| DBxref | InterPro:IPR032451 |
| DBxref | InterPro:IPR007526 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR001005 |
| DBxref | PFAM:PF16495 |
| DBxref | PFAM:PF04433 |
| DBxref | PFAM:PF13921 |
| DBxref | PFAM:PF00249 |
| Product | component of the RSC chromatin remodeling complex |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851936.1 | supercontig | KZ851936.1:20183..23100 + |
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