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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851942.1:109977..111247+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_373766-T1 ID=M747DRAFT_373766-T1|Name=M747DRAFT_373766-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1271bp|location=Sequence derived from alignment at KZ851942.1:109977..111247+ (Aspergillus niger ATCC 13496) GTTTGACGCGATGTCGAGAGGGGTATTCTTGTTTTCGAAAGTCACATACA
GCAGCCATACGCAGCATTATGTTTGATGTGCAAGGAAATGTACCAAATAG
TCCTGACTGACATTTATCTCTTTTGTATGGGTTGCTAAGTAGGCTTAGTA
TGCTCTGGTGGCAGGTGGCTCCAAGGGTTTGGGAAGAGAAATCTCACTGG
CGTTGGTAAAGCGAGGTACGTCGAAGGACTGCACCGAGAGCTCTTAAGCG
TTGCCACTGACTCTTTGCTATCAGGAGCTCACGTGACAGTGATTGCGCGC
TCTCAAGATGCATTGGATAGGATCAAAGTGGACATGGAAGCGGTACGCGT
GCATGGCGATCAAGTCATCGGTATCCAGAGCTTGGATTTGACCAATAGTG
AAGAAGTTTGTACAATTGAATTGCGAGTCTATCTCAACGAAACTTTCACT
GATGAGATATACTGCTTGGCTAGGTGTCCAGATTTGTCCAGACATTTGGA
AACAAGATCACCGCTCTGTTCTGTACCGCAGGTGGCACGGACGAAGAGGT
GGGCCACTTTGTGGACATCCCTGCGACCTCAATTCAGAGCTGCATGGAGA
AGAATTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGGGACATGG
ACGACTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGAAATCTCG
CCACATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTCCCAGGAT
ACGCTGCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGCCGATTCC
TTGAGGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATACAAGTTCA
CTGTAGCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGAGAACAGG
CGCGGAAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAATGATGGT
GGTGGGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTGGACTTGA
TTCGGGGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTGCTCCTGA
ATAACATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGACTGGTGC
ATGGGCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTTATCTAGA
CTGGAAGGTAGCAAGGTCTGGCGGCGGAACTGTATAAAAGCCTTACCAGA
AAGAGACATATCCTGGCTTCTTACGTCTATGGGTTTAATCTACGATGCTA
TGAATTCTATCTTAGATTGAG back to topCoding sequence (CDS) from alignment at KZ851942.1:109977..111247+ >M747DRAFT_373766-T1 ID=M747DRAFT_373766-T1|Name=M747DRAFT_373766-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3732bp|location=Sequence derived from alignment at KZ851942.1:109977..111247+ (Aspergillus niger ATCC 13496) ATGTTTGATGTGCAAGGAAATTATGCTCTGGTGGCAGGTGGCTCCAAGGG TTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGAGCTCACGTGA CAGTGATTGCGCGCTCTCAAGATGCATTGGATAGGATCAAAGTGGACATG GAAGCGGTACGCGTGCATGGCGATCAAGTCATCGGTATCCAGAGCTTGGA TTTGACCAATAGTGAAGAAGTGTCCAGATTTGTCCAGACATTTGGAAACA AGATCACCGCTCTGTTCTGTACCGCAGGTGGCACGGACGAAGAGGTGGGC CACTTTGTGGACATCCCTGCGACCTCAATTCAGAGCTGCATGGAGAAGAA TTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGGGACATGGACGA CTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGAAATCTCGCCAC ATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTCCCAGGATACGC TGCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGCCGATTCCTTGA GGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATACAAGTTCACTGT AGCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGAGAACAGGCGCG GAAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAATGATGGTGGTG GGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCG GGGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTGCTCCTGAATAA CATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGACTGGTGCATGG GCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTTATCTAGACTGG AAGGTAGCAAGGTCTGGCGGCGGAACTGTATAAATGTTTGATGTGCAAGG AAATTATGCTCTGGTGGCAGGTGGCTCCAAGGGTTTGGGAAGAGAAATCT CACTGGCGTTGGTAAAGCGAGGAGCTCACGTGACAGTGATTGCGCGCTCT CAAGATGCATTGGATAGGATCAAAGTGGACATGGAAGCGGTACGCGTGCA TGGCGATCAAGTCATCGGTATCCAGAGCTTGGATTTGACCAATAGTGAAG AAGTGTCCAGATTTGTCCAGACATTTGGAAACAAGATCACCGCTCTGTTC TGTACCGCAGGTGGCACGGACGAAGAGGTGGGCCACTTTGTGGACATCCC TGCGACCTCAATTCAGAGCTGCATGGAGAAGAATTATCTTACAGCAGCGT TTGTTGCTCAGGCTGTCATGGGGACATGGACGACTGAGTTGAAGCGGGTA GGAGAGTGCGACGGTGCCCAGAAATCTCGCCACATTGTTTTCACTGCTTC CACAGCAGCCCTCGTCGCTGTCCCAGGATACGCTGCATACTCACCATCAA AGGCAGCGATCCGAGCATTGGCCGATTCCTTGAGGCAGGAAAGTCTCATG TACCCCCCTGCTGGGGCGATACAAGTTCACTGTAGCTTCCCTGGGACATT TTACACGGACAGCTTCTATAGAGAACAGGCGCGGAAGCCGCAATTATGCA AAGAAATTGAAGGAACTGTTAATGATGGTGGTGGGTTGACAGCCAAAGAT GTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGGGGTGTTACTTCATACC CACGGATCTGCAAACCCGGTTGCTCCTGAATAACATGCGAGGTCCCAGCC CACGGGACTACCCATTACTTGACTGGTGCATGGGCTGGGCTGCCTCGTTG GTCTGGCCAATTATAGGAACTTATCTAGACTGGAAGGTAGCAAGGTCTGG CGGCGGAACTGTATAAATGTTTGATGTGCAAGGAAATTATGCTCTGGTGG CAGGTGGCTCCAAGGGTTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAG CGAGGAGCTCACGTGACAGTGATTGCGCGCTCTCAAGATGCATTGGATAG GATCAAAGTGGACATGGAAGCGGTACGCGTGCATGGCGATCAAGTCATCG GTATCCAGAGCTTGGATTTGACCAATAGTGAAGAAGTGTCCAGATTTGTC CAGACATTTGGAAACAAGATCACCGCTCTGTTCTGTACCGCAGGTGGCAC GGACGAAGAGGTGGGCCACTTTGTGGACATCCCTGCGACCTCAATTCAGA GCTGCATGGAGAAGAATTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTC ATGGGGACATGGACGACTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGC CCAGAAATCTCGCCACATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCG CTGTCCCAGGATACGCTGCATACTCACCATCAAAGGCAGCGATCCGAGCA TTGGCCGATTCCTTGAGGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGC GATACAAGTTCACTGTAGCTTCCCTGGGACATTTTACACGGACAGCTTCT ATAGAGAACAGGCGCGGAAGCCGCAATTATGCAAAGAAATTGAAGGAACT GTTAATGATGGTGGTGGGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCT TGTTGGACTTGATTCGGGGTGTTACTTCATACCCACGGATCTGCAAACCC GGTTGCTCCTGAATAACATGCGAGGTCCCAGCCCACGGGACTACCCATTA CTTGACTGGTGCATGGGCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGG AACTTATCTAGACTGGAAGGTAGCAAGGTCTGGCGGCGGAACTGTATAAA TGTTTGATGTGCAAGGAAATTATGCTCTGGTGGCAGGTGGCTCCAAGGGT TTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGAGCTCACGTGAC AGTGATTGCGCGCTCTCAAGATGCATTGGATAGGATCAAAGTGGACATGG AAGCGGTACGCGTGCATGGCGATCAAGTCATCGGTATCCAGAGCTTGGAT TTGACCAATAGTGAAGAAGTGTCCAGATTTGTCCAGACATTTGGAAACAA GATCACCGCTCTGTTCTGTACCGCAGGTGGCACGGACGAAGAGGTGGGCC ACTTTGTGGACATCCCTGCGACCTCAATTCAGAGCTGCATGGAGAAGAAT TATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGGGACATGGACGAC TGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGAAATCTCGCCACA TTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTCCCAGGATACGCT GCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGCCGATTCCTTGAG GCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATACAAGTTCACTGTA GCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGAGAACAGGCGCGG AAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAATGATGGTGGTGG GTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGG GGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTGCTCCTGAATAAC ATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGACTGGTGCATGGG CTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTTATCTAGACTGGA AGGTAGCAAGGTCTGGCGGCGGAACTGTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_8519421.1 |
Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
DBxref | InterPro:IPR036291 |
DBxref | InterPro:IPR002347 |
DBxref | PFAM:PF08659 |
DBxref | PFAM:PF13561 |
DBxref | PFAM:PF00106 |
Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851942.1 | supercontig | KZ851942.1:109977..111247 + |
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