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M747DRAFT_373818-T1, M747DRAFT_373818-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373818-T1
Unique NameM747DRAFT_373818-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851942.1:266990..268672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373818-T1 ID=M747DRAFT_373818-T1|Name=M747DRAFT_373818-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1683bp|location=Sequence derived from alignment at KZ851942.1:266990..268672- (Aspergillus niger ATCC 13496)
CATCGATCGAACATCGCGCGCAAGAGCCCTTTCGAATCTCCCCGCAATTT
GGCAGCGCCGTTTCGCAATTGCTCCTAGAAACTACTTTCGTTACTGAAGT
CTTCTTCGCCACTCATTTTGCAAGGAACTCTCTCCCCACTCCGCCATTCA
CAGCCCTGCGGGGCATCAGTTCAGGCTGCTGCCGCCGCAATCGCGAACCC
GCCAGCAGCAGCAACAATTACACAAGTACCACCTTGACAATGGCGCCTCC
TCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTC
TAAAAACACAGAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCTCAT
ACGTATATGCCCATCCGACATATTACTATCACAGCAGAGAAGCAAAACGC
ATACTGATGATGGAGGACGACGGAAAATCTAGGATTCGCACAATAGCCTG
GAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGACCGTACCCTTC
GGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGC
GGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTC
CGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCC
GGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACC
TTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGGTGAG
CAAAACACACACGAGCACGAAAACAATGCGCTCAGCATCAGGGACTTGTC
AATTGACCAAACGCCCAATATCTCTAGGACGACACCCTCATACCCATCTC
CGTCGAATCCCCCTCCACCCCAACCATCCACCCAGACGGACCACTCAACG
CTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTAC
ACAGCCCTAGAACCACACCCTCAGCCCATCCAAACAAACGCAACGACCTT
CTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCA
CGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGCCAAT
CTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCTTAGC
ACCTACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCC
TATGGGATACAACGGACTGGATCTGCAAGCGTACTGTCTCGAGCAATAAC
GGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTG
CGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCC
ATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCC
AATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGC
ATATTCTACTACTGCGGATGGATCGGGCCCAGGCGGTTTGAGAATTGTAG
GGGCTGCGGGTGGAAGTTTGTAGAAACAGCGGTATCCATGGTTCGAAAAG
GTGATATTACTTTGCATCTTTGTGTATGTGTGTCTTGTGGCGTTTGGCGC
GTTGGATGTTTATTTGAGCTTATGATGTCTACGGTAGATATTAAGCATTG
TATTGCATGTCTTGTATAGAGTCCATTCCTATG
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Coding sequence (CDS) from alignment at KZ851942.1:266990..268672-

>M747DRAFT_373818-T1 ID=M747DRAFT_373818-T1|Name=M747DRAFT_373818-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3366bp|location=Sequence derived from alignment at KZ851942.1:266990..268672- (Aspergillus niger ATCC 13496)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCA
AGCGTACTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
CCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATT
CGCACAATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGC
AGACCGTACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACT
CCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAAC
CCCGTTCGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCG
CGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAG
GCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTT
GGCAGGAAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTT
TGGTCTTGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTG
CTCGCGGGCCTGGTTCTCATACGACGACACCCTCATACCCATCTCCGTCG
AATCCCCCTCCACCCCAACCATCCACCCAGACGGACCACTCAACGCTGCA
GCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGC
CCTAGAACCACACCCTCAGCCCATCCAAACAAACGCAACGACCTTCTCAC
ATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACC
GGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGCCAATCTCCA
CACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCTTAGCACCTA
CAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGG
GATACAACGGACTGGATCTGCAAGCGTACTGTCTCGAGCAATAACGGTGG
AGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCG
CTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCG
GAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTC
GGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATT
CTACTACTGCGGATGGATCGGGCCCAGGCGGTTTGAGAATTGTAGGGGCT
GCGGGTGGAAGTTTGTAGGATTCGCACAATAGCCTGGAACCCTACCGGTC
AACTTATTGCCACCGGCTCCGCAGACCGTACCCTTCGGATCTGGAACCCT
GAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGG
AATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCCAGCT
GCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGC
GTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGC
TGATGGAAGGGTAATGATCGTTGGCAGGAAGATGGCGCCTCCTCGACGGA
ATCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACA
CAGAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCTCATACGACGAC
ACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCATCCACCC
AGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCT
TCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCCATCCAA
ACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGA
CCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTT
ACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCTGCTTGC
CTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGGGGGCAG
CGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCAAGCGTA
CTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTC
GACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAA
TGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTC
CTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCT
TCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGCCCAGG
CGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATTCGCACA
ATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGACCG
TACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCG
AACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTT
CGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGTTTG
GGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGG
CATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGG
AAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCT
TGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTGCTCGCG
GGCCTGGTTCTCATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373818M747DRAFT_373818Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373818-T1M747DRAFT_373818-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373818-T1.cdsM747DRAFT_373818-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373818-T1.utr3p1M747DRAFT_373818-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373818-T1.exon3M747DRAFT_373818-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_373818-T1.exon2M747DRAFT_373818-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373818-T1.exon1M747DRAFT_373818-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373818-T1.utr5p1M747DRAFT_373818-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
ProductWD repeat-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851942.1supercontigKZ851942.1:266990..268672 -
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