You are here

Home

M747DRAFT_373935-T1, M747DRAFT_373935-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_373935-T1
Unique NameM747DRAFT_373935-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851944.1:80861..82499-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_373935-T1 ID=M747DRAFT_373935-T1|Name=M747DRAFT_373935-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1639bp|location=Sequence derived from alignment at KZ851944.1:80861..82499- (Aspergillus niger ATCC 13496)
TGTCACTTCTTCTGATTGTCTAACTATCTTTATTCGGATGTCTGTTGCGG
AGAAAGTTATACGCAGTTAGTTGCGGTGTCGCGTGACAAAGGTTTTGTTA
AGTAGAGAGTAGTAAGTTATGCATCACTTTGAATAATACACAGCGACTGA
TCAGGCTGTAGTTATATTTCACTCTGTGCAAAAATACCGGGAGGAATTCG
GTATTCCTCAAGAGGACTATACACTTCGTCCGTTCCCTAGTCACAGATGC
TATAAACCAGATCATCATACCATGTACCAAAGGAATATCCTACGCCTCCG
CGGGGGAACCGTCCGGCTTCAAGCCAATCCCACATACACACCTCAACGTC
ACTTCCCCTACCTCCCACTCTCTATTCAACGAGCATACTCCACCCCAAGC
GAGACTCCATCACCCCAATTCACCCCCTCCAACCGGTTATCCAACCGAAC
ATGCATGATCACCGGCGGAACATCCGGCATCGGGTTCGCCATCGCAGAGC
GCTTCCTTCAAGAAGGTGCCGCACGCGTGATCCTAGTCGGACGATCCTAC
GAGCGACTCTATAACGCTGCATCTCGACTTCAGATCGAGTCCCCTGAAAT
CCCGTCCACGGAACCACCCCAGCTCATCGCCAACCCAGAGCAACACCAGC
TCCTCGAATCCTCGTCCAGAATCAGCCTACTAATCGGCGACATCGCCGAA
GCAGGATCATGGACGCGAGAGCTCGAGAAAGCAATGGTAAGTTACCTACC
TTCTTACAAACAACACCGACGAGATACCAGAACATTTCTAACAATGATAA
ATGTAGCAAACAACAAACCCAGACATCCTCATCAACGCCGCCGGCCTCTC
CATTTCCTCGATCCTTCCTAAATTCGAACCCACAGATATTTCACGCATCC
TGCGCACGAACCTCGAGGGCGCGCTACTCACGTCTCGAGCCTTCATCCGC
GCATCGATACGCAATCGTATGAAGAGATCTAGCACTCCCACCACCAGTGG
AAGCACCGCAGCATCTAAATGCATTATCAACATCTCCTCCCTGCTAGCAC
ACAAATCTGGAACTGGGGCCGTTCCCTATGCAGCTTCAAAAGCTGGAGTC
CTCGGCCTAACGAGATCCGTCGCCGTTGAAGCGGCCGCTTCACTGCGTGA
TGTGGTGGTTAGATCTAATGCTATTGTGCCGGGGTATATTGAGACGCCTA
TGATATCTGGTTTGTCTTTCTTTCTTTCCTGTTTTTTCGTTTCCTATCCC
GTCGTTATTATATCTTGTTGAGGATGTGGTGAGGATGAGTTACTGATGCT
TTTTTGATTTGGGAATAGATTTCTCAGATGGCGAAACAGCCCGGTTGAAG
GAGAGTATCCCCGTGCGACGTTTCGGGAGACCGGATGAGGTTGCGGATGC
GGCGGTGTTTTTGGCGCAGAATGAGTATGCGAATAATTGTGTGTTGAATT
TGGATGGGGGGCTGAGCGCCATCTAGCGATGCATACTGTCTATATCTTGG
GTGATGGGTTCGGAGTGTATGGATACTTGGTATGATAGTATTATTAACTG
GACTGTATTATGTGTGTACGATACGTGAGGAGTGACTTGTATCTAACAAG
AGCACCTTCTCCTTTTCATGCTGTTCATTTATCTAGCAT
back to top

Coding sequence (CDS) from alignment at KZ851944.1:80861..82499-

>M747DRAFT_373935-T1 ID=M747DRAFT_373935-T1|Name=M747DRAFT_373935-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3078bp|location=Sequence derived from alignment at KZ851944.1:80861..82499- (Aspergillus niger ATCC 13496)
ATTTCTCAGATGGCGAAACAGCCCGGTTGAAGGAGAGTATCCCCGTGCGA
CGTTTCGGGAGACCGGATGAGGTTGCGGATGCGGCGGTGTTTTTGGCGCA
GAATGAGTATGCGAATAATTGTGTGTTGAATTTGGATGGGGGGCTGAGCG
CCATCTAGCAAACAACAAACCCAGACATCCTCATCAACGCCGCCGGCCTC
TCCATTTCCTCGATCCTTCCTAAATTCGAACCCACAGATATTTCACGCAT
CCTGCGCACGAACCTCGAGGGCGCGCTACTCACGTCTCGAGCCTTCATCC
GCGCATCGATACGCAATCGTATGAAGAGATCTAGCACTCCCACCACCAGT
GGAAGCACCGCAGCATCTAAATGCATTATCAACATCTCCTCCCTGCTAGC
ACACAAATCTGGAACTGGGGCCGTTCCCTATGCAGCTTCAAAAGCTGGAG
TCCTCGGCCTAACGAGATCCGTCGCCGTTGAAGCGGCCGCTTCACTGCGT
GATGTGGTGGTTAGATCTAATGCTATTGTGCCGGGGTATATTGAGACGCC
TATGATATCTGATGTACCAAAGGAATATCCTACGCCTCCGCGGGGGAACC
GTCCGGCTTCAAGCCAATCCCACATACACACCTCAACGTCACTTCCCCTA
CCTCCCACTCTCTATTCAACGAGCATACTCCACCCCAAGCGAGACTCCAT
CACCCCAATTCACCCCCTCCAACCGGTTATCCAACCGAACATGCATGATC
ACCGGCGGAACATCCGGCATCGGGTTCGCCATCGCAGAGCGCTTCCTTCA
AGAAGGTGCCGCACGCGTGATCCTAGTCGGACGATCCTACGAGCGACTCT
ATAACGCTGCATCTCGACTTCAGATCGAGTCCCCTGAAATCCCGTCCACG
GAACCACCCCAGCTCATCGCCAACCCAGAGCAACACCAGCTCCTCGAATC
CTCGTCCAGAATCAGCCTACTAATCGGCGACATCGCCGAAGCAGGATCAT
GGACGCGAGAGCTCGAGAAAGCAATGATTTCTCAGATGGCGAAACAGCCC
GGTTGAAGGAGAGTATCCCCGTGCGACGTTTCGGGAGACCGGATGAGGTT
GCGGATGCGGCGGTGTTTTTGGCGCAGAATGAGTATGCGAATAATTGTGT
GTTGAATTTGGATGGGGGGCTGAGCGCCATCTAGCAAACAACAAACCCAG
ACATCCTCATCAACGCCGCCGGCCTCTCCATTTCCTCGATCCTTCCTAAA
TTCGAACCCACAGATATTTCACGCATCCTGCGCACGAACCTCGAGGGCGC
GCTACTCACGTCTCGAGCCTTCATCCGCGCATCGATACGCAATCGTATGA
AGAGATCTAGCACTCCCACCACCAGTGGAAGCACCGCAGCATCTAAATGC
ATTATCAACATCTCCTCCCTGCTAGCACACAAATCTGGAACTGGGGCCGT
TCCCTATGCAGCTTCAAAAGCTGGAGTCCTCGGCCTAACGAGATCCGTCG
CCGTTGAAGCGGCCGCTTCACTGCGTGATGTGGTGGTTAGATCTAATGCT
ATTGTGCCGGGGTATATTGAGACGCCTATGATATCTGATGTACCAAAGGA
ATATCCTACGCCTCCGCGGGGGAACCGTCCGGCTTCAAGCCAATCCCACA
TACACACCTCAACGTCACTTCCCCTACCTCCCACTCTCTATTCAACGAGC
ATACTCCACCCCAAGCGAGACTCCATCACCCCAATTCACCCCCTCCAACC
GGTTATCCAACCGAACATGCATGATCACCGGCGGAACATCCGGCATCGGG
TTCGCCATCGCAGAGCGCTTCCTTCAAGAAGGTGCCGCACGCGTGATCCT
AGTCGGACGATCCTACGAGCGACTCTATAACGCTGCATCTCGACTTCAGA
TCGAGTCCCCTGAAATCCCGTCCACGGAACCACCCCAGCTCATCGCCAAC
CCAGAGCAACACCAGCTCCTCGAATCCTCGTCCAGAATCAGCCTACTAAT
CGGCGACATCGCCGAAGCAGGATCATGGACGCGAGAGCTCGAGAAAGCAA
TGATTTCTCAGATGGCGAAACAGCCCGGTTGAAGGAGAGTATCCCCGTGC
GACGTTTCGGGAGACCGGATGAGGTTGCGGATGCGGCGGTGTTTTTGGCG
CAGAATGAGTATGCGAATAATTGTGTGTTGAATTTGGATGGGGGGCTGAG
CGCCATCTAGCAAACAACAAACCCAGACATCCTCATCAACGCCGCCGGCC
TCTCCATTTCCTCGATCCTTCCTAAATTCGAACCCACAGATATTTCACGC
ATCCTGCGCACGAACCTCGAGGGCGCGCTACTCACGTCTCGAGCCTTCAT
CCGCGCATCGATACGCAATCGTATGAAGAGATCTAGCACTCCCACCACCA
GTGGAAGCACCGCAGCATCTAAATGCATTATCAACATCTCCTCCCTGCTA
GCACACAAATCTGGAACTGGGGCCGTTCCCTATGCAGCTTCAAAAGCTGG
AGTCCTCGGCCTAACGAGATCCGTCGCCGTTGAAGCGGCCGCTTCACTGC
GTGATGTGGTGGTTAGATCTAATGCTATTGTGCCGGGGTATATTGAGACG
CCTATGATATCTGATGTACCAAAGGAATATCCTACGCCTCCGCGGGGGAA
CCGTCCGGCTTCAAGCCAATCCCACATACACACCTCAACGTCACTTCCCC
TACCTCCCACTCTCTATTCAACGAGCATACTCCACCCCAAGCGAGACTCC
ATCACCCCAATTCACCCCCTCCAACCGGTTATCCAACCGAACATGCATGA
TCACCGGCGGAACATCCGGCATCGGGTTCGCCATCGCAGAGCGCTTCCTT
CAAGAAGGTGCCGCACGCGTGATCCTAGTCGGACGATCCTACGAGCGACT
CTATAACGCTGCATCTCGACTTCAGATCGAGTCCCCTGAAATCCCGTCCA
CGGAACCACCCCAGCTCATCGCCAACCCAGAGCAACACCAGCTCCTCGAA
TCCTCGTCCAGAATCAGCCTACTAATCGGCGACATCGCCGAAGCAGGATC
ATGGACGCGAGAGCTCGAGAAAGCAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_373935M747DRAFT_373935Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373935-T1M747DRAFT_373935-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373935-T1.cdsM747DRAFT_373935-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373935-T1.utr3p1M747DRAFT_373935-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373935-T1.exon4M747DRAFT_373935-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_373935-T1.exon3M747DRAFT_373935-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_373935-T1.exon2M747DRAFT_373935-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_373935-T1.exon1M747DRAFT_373935-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_373935-T1.utr5p2M747DRAFT_373935-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_373935-T1.utr5p1M747DRAFT_373935-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF02719
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
Product3-oxoacyl-acyl carrier protein reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851944.1supercontigKZ851944.1:80861..82499 -
Powered by Drupal