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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851947.1:87311..89393- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_374185-T1 ID=M747DRAFT_374185-T1|Name=M747DRAFT_374185-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2083bp|location=Sequence derived from alignment at KZ851947.1:87311..89393- (Aspergillus niger ATCC 13496)
CTAACTCTCTTTCTCTCACACATCCCTCTTCACAATGGCTACCTACGCTC
TCTCTCCGGCTCACCGGAACGTATGTACCCCACTGAACTTTTTTTCCTAC
CTGGGGTGTCCCTCACAGCAGCACTCACTGACTCATCGATGTAGCAAATG
GAGGTGTCCCTCGTGGACAGCGATCCTGAGATCGCTCAGATCATGGTACG
TTTTGCACTACACATTGTGTTCTCTTCAAATATGTAGTGTCATGGTACTA
ACTGCCCGACTACAGGAGAAGGAAATCCAACGTCAGCGCGAATCCATCGT
CCTGATCGCCTCGGAGAACTTCACCTCCCACGCTGTCTTCGATGCTCTGG
GTTCCCCCATGAGCAACAAGTACTCCGAGGGTTACCCCGGCGCTCGCTAC
TACGGTGGCAACCAGCACATCGATGCCATCGAGCTTACCTGCCAGGCTCG
TGCCCTCAAGGCTTTCAACCTGGACCCCGCCAAGTGGGGCGTCAACGTTC
AGTGCCTCAGTGGTAGCCCTGCCAACCTGCAGGTCTACCAGGCCCTCATG
CGCCCTCACGACCGTCTCATGGGTCTTGACCTCCCCCACGGTGGTCACTT
GAGTCACGGTTACCAGACTCCCGCCAGAAAGTAAGTTCTGCGGATTCGTC
TCCCGACACAAGACACGTCGTGTAAGGGTACATTGAATGCTAACTGTTCG
CTCCGCAGGATCTCTGCTGTCTCTACCTACTTCGAGACCTTCCCCTACCG
TGTCAACCTTGAGACCGGTATCATTGACTACGATCAACTCGAGGCCAACG
CTGAGCTCTACCGCCCCAAGTGCTTGGTCGCTGGTACCTCCGCCTACTGC
CGCCTGATCGACTACGCTCGCATGCGCAAGATCGCTGACAAGGTCGGCGC
CTACCTCATTGTCGACATGGCTCACATCTCTGGTCTGATTGCCGCCGGTG
TCATCCCCTCCCCCTTCGAGTACGCCGATGTTGTCACCACCACCACCCAC
AAGTCCCTCCGTGGTCCCCGTGGTGCCATGATCTTCTTCCGCAAGGGTGT
CCGCAGCACTGACCCCAAGACCGGCAAGGACATCATGTATGACCTTGAGG
GCCCCATCAACTTCTCTGTCTTCCCTGGTCACCAGGGTGGTCCCCACAAC
CACACCATCACTGCTCTGGCTGTTGCCCTTAAGCAGGTTGATACCCCCGA
GTTCAAGCAGTACCAGCAGCAGGTCATCAAGAACGCCAAGGCCCTCGAGG
AGGAGTTCAAGGCTCTCGGTCACAAGCTCGTCTCTGACGGCACTGACAGC
CACATGGTCCTTGTCGACCTCCGCAACAAGAGCCTGGACGGTGCTCGTGT
CGAGGCTGTCCTCGAGCAGATCAACATTGCTTGCAACAAGAACTCCATCC
CCGGTGACAAGTCTGCTCTGACCCCCTGCGGTATCCGTATCGGTGCCCCC
GCCATGACCACCCGTGGTATGGGTGAGGAGGACTTCAAGCGCATTGCCCG
CTACATCGACCAGTCCATCAACCTCTGCAAGAAGGTCCAGAGCGAGCTTC
CCAAGGAGGCCAACAAGCTCAAGGACTTCAAGGCTAAGGTTGCCTCCGAG
ACCGTCCCTGAGATCCTCAGCCTCCGCAAGGAGGTCGCTGAGTGGGCCAG
CACCTTCCCCCTCCCCGTCTAAGCTAGTCATAGCCGGGTGACTTTTGATA
TGATACCATAACATTCTATCTTCTTCTATTTTTATTTTTCTTTCCTTTGT
TTTTTATCTTGTTAGGTTACGAGTTCAACATCATTGCGAGCAAAAACGGA
TTGTGGGCTGTGCGTTCTAAGGGGTTTTATACAGGTCTGCTTTTTCAACC
TTACGCGGGTCATGGGATATGGATATGCATGAGCATGTGAATGAACAAAT
AGCACCGGGATGACTTCTTCAACACTTCTTCAACAGGGCAGGAAAAGTTC
GTGGTTGCATGGAGGCTTGGTACGCCTGGTTGAGTCTATTTCTACCTAGT
AATTAGGTATTATGAACTGAAATAGAAAGATAATAAGTTCCATGAGACAA
GCCAGACCCTTGACTGTGTATCTTGTAGCTTTC back to topCoding sequence (CDS) from alignment at KZ851947.1:87311..89393- >M747DRAFT_374185-T1 ID=M747DRAFT_374185-T1|Name=M747DRAFT_374185-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5664bp|location=Sequence derived from alignment at KZ851947.1:87311..89393- (Aspergillus niger ATCC 13496)
GATCTCTGCTGTCTCTACCTACTTCGAGACCTTCCCCTACCGTGTCAACC
TTGAGACCGGTATCATTGACTACGATCAACTCGAGGCCAACGCTGAGCTC
TACCGCCCCAAGTGCTTGGTCGCTGGTACCTCCGCCTACTGCCGCCTGAT
CGACTACGCTCGCATGCGCAAGATCGCTGACAAGGTCGGCGCCTACCTCA
TTGTCGACATGGCTCACATCTCTGGTCTGATTGCCGCCGGTGTCATCCCC
TCCCCCTTCGAGTACGCCGATGTTGTCACCACCACCACCCACAAGTCCCT
CCGTGGTCCCCGTGGTGCCATGATCTTCTTCCGCAAGGGTGTCCGCAGCA
CTGACCCCAAGACCGGCAAGGACATCATGTATGACCTTGAGGGCCCCATC
AACTTCTCTGTCTTCCCTGGTCACCAGGGTGGTCCCCACAACCACACCAT
CACTGCTCTGGCTGTTGCCCTTAAGCAGGTTGATACCCCCGAGTTCAAGC
AGTACCAGCAGCAGGTCATCAAGAACGCCAAGGCCCTCGAGGAGGAGTTC
AAGGCTCTCGGTCACAAGCTCGTCTCTGACGGCACTGACAGCCACATGGT
CCTTGTCGACCTCCGCAACAAGAGCCTGGACGGTGCTCGTGTCGAGGCTG
TCCTCGAGCAGATCAACATTGCTTGCAACAAGAACTCCATCCCCGGTGAC
AAGTCTGCTCTGACCCCCTGCGGTATCCGTATCGGTGCCCCCGCCATGAC
CACCCGTGGTATGGGTGAGGAGGACTTCAAGCGCATTGCCCGCTACATCG
ACCAGTCCATCAACCTCTGCAAGAAGGTCCAGAGCGAGCTTCCCAAGGAG
GCCAACAAGCTCAAGGACTTCAAGGCTAAGGTTGCCTCCGAGACCGTCCC
TGAGATCCTCAGCCTCCGCAAGGAGGTCGCTGAGTGGGCCAGCACCTTCC
CCCTCCCCGTCTAAGAGAAGGAAATCCAACGTCAGCGCGAATCCATCGTC
CTGATCGCCTCGGAGAACTTCACCTCCCACGCTGTCTTCGATGCTCTGGG
TTCCCCCATGAGCAACAAGTACTCCGAGGGTTACCCCGGCGCTCGCTACT
ACGGTGGCAACCAGCACATCGATGCCATCGAGCTTACCTGCCAGGCTCGT
GCCCTCAAGGCTTTCAACCTGGACCCCGCCAAGTGGGGCGTCAACGTTCA
GTGCCTCAGTGGTAGCCCTGCCAACCTGCAGGTCTACCAGGCCCTCATGC
GCCCTCACGACCGTCTCATGGGTCTTGACCTCCCCCACGGTGGTCACTTG
AGTCACGGTTACCAGACTCCCGCCAGAAACAAATGGAGGTGTCCCTCGTG
GACAGCGATCCTGAGATCGCTCAGATCATGATGGCTACCTACGCTCTCTC
TCCGGCTCACCGGAACGATCTCTGCTGTCTCTACCTACTTCGAGACCTTC
CCCTACCGTGTCAACCTTGAGACCGGTATCATTGACTACGATCAACTCGA
GGCCAACGCTGAGCTCTACCGCCCCAAGTGCTTGGTCGCTGGTACCTCCG
CCTACTGCCGCCTGATCGACTACGCTCGCATGCGCAAGATCGCTGACAAG
GTCGGCGCCTACCTCATTGTCGACATGGCTCACATCTCTGGTCTGATTGC
CGCCGGTGTCATCCCCTCCCCCTTCGAGTACGCCGATGTTGTCACCACCA
CCACCCACAAGTCCCTCCGTGGTCCCCGTGGTGCCATGATCTTCTTCCGC
AAGGGTGTCCGCAGCACTGACCCCAAGACCGGCAAGGACATCATGTATGA
CCTTGAGGGCCCCATCAACTTCTCTGTCTTCCCTGGTCACCAGGGTGGTC
CCCACAACCACACCATCACTGCTCTGGCTGTTGCCCTTAAGCAGGTTGAT
ACCCCCGAGTTCAAGCAGTACCAGCAGCAGGTCATCAAGAACGCCAAGGC
CCTCGAGGAGGAGTTCAAGGCTCTCGGTCACAAGCTCGTCTCTGACGGCA
CTGACAGCCACATGGTCCTTGTCGACCTCCGCAACAAGAGCCTGGACGGT
GCTCGTGTCGAGGCTGTCCTCGAGCAGATCAACATTGCTTGCAACAAGAA
CTCCATCCCCGGTGACAAGTCTGCTCTGACCCCCTGCGGTATCCGTATCG
GTGCCCCCGCCATGACCACCCGTGGTATGGGTGAGGAGGACTTCAAGCGC
ATTGCCCGCTACATCGACCAGTCCATCAACCTCTGCAAGAAGGTCCAGAG
CGAGCTTCCCAAGGAGGCCAACAAGCTCAAGGACTTCAAGGCTAAGGTTG
CCTCCGAGACCGTCCCTGAGATCCTCAGCCTCCGCAAGGAGGTCGCTGAG
TGGGCCAGCACCTTCCCCCTCCCCGTCTAAGAGAAGGAAATCCAACGTCA
GCGCGAATCCATCGTCCTGATCGCCTCGGAGAACTTCACCTCCCACGCTG
TCTTCGATGCTCTGGGTTCCCCCATGAGCAACAAGTACTCCGAGGGTTAC
CCCGGCGCTCGCTACTACGGTGGCAACCAGCACATCGATGCCATCGAGCT
TACCTGCCAGGCTCGTGCCCTCAAGGCTTTCAACCTGGACCCCGCCAAGT
GGGGCGTCAACGTTCAGTGCCTCAGTGGTAGCCCTGCCAACCTGCAGGTC
TACCAGGCCCTCATGCGCCCTCACGACCGTCTCATGGGTCTTGACCTCCC
CCACGGTGGTCACTTGAGTCACGGTTACCAGACTCCCGCCAGAAACAAAT
GGAGGTGTCCCTCGTGGACAGCGATCCTGAGATCGCTCAGATCATGATGG
CTACCTACGCTCTCTCTCCGGCTCACCGGAACGATCTCTGCTGTCTCTAC
CTACTTCGAGACCTTCCCCTACCGTGTCAACCTTGAGACCGGTATCATTG
ACTACGATCAACTCGAGGCCAACGCTGAGCTCTACCGCCCCAAGTGCTTG
GTCGCTGGTACCTCCGCCTACTGCCGCCTGATCGACTACGCTCGCATGCG
CAAGATCGCTGACAAGGTCGGCGCCTACCTCATTGTCGACATGGCTCACA
TCTCTGGTCTGATTGCCGCCGGTGTCATCCCCTCCCCCTTCGAGTACGCC
GATGTTGTCACCACCACCACCCACAAGTCCCTCCGTGGTCCCCGTGGTGC
CATGATCTTCTTCCGCAAGGGTGTCCGCAGCACTGACCCCAAGACCGGCA
AGGACATCATGTATGACCTTGAGGGCCCCATCAACTTCTCTGTCTTCCCT
GGTCACCAGGGTGGTCCCCACAACCACACCATCACTGCTCTGGCTGTTGC
CCTTAAGCAGGTTGATACCCCCGAGTTCAAGCAGTACCAGCAGCAGGTCA
TCAAGAACGCCAAGGCCCTCGAGGAGGAGTTCAAGGCTCTCGGTCACAAG
CTCGTCTCTGACGGCACTGACAGCCACATGGTCCTTGTCGACCTCCGCAA
CAAGAGCCTGGACGGTGCTCGTGTCGAGGCTGTCCTCGAGCAGATCAACA
TTGCTTGCAACAAGAACTCCATCCCCGGTGACAAGTCTGCTCTGACCCCC
TGCGGTATCCGTATCGGTGCCCCCGCCATGACCACCCGTGGTATGGGTGA
GGAGGACTTCAAGCGCATTGCCCGCTACATCGACCAGTCCATCAACCTCT
GCAAGAAGGTCCAGAGCGAGCTTCCCAAGGAGGCCAACAAGCTCAAGGAC
TTCAAGGCTAAGGTTGCCTCCGAGACCGTCCCTGAGATCCTCAGCCTCCG
CAAGGAGGTCGCTGAGTGGGCCAGCACCTTCCCCCTCCCCGTCTAAGAGA
AGGAAATCCAACGTCAGCGCGAATCCATCGTCCTGATCGCCTCGGAGAAC
TTCACCTCCCACGCTGTCTTCGATGCTCTGGGTTCCCCCATGAGCAACAA
GTACTCCGAGGGTTACCCCGGCGCTCGCTACTACGGTGGCAACCAGCACA
TCGATGCCATCGAGCTTACCTGCCAGGCTCGTGCCCTCAAGGCTTTCAAC
CTGGACCCCGCCAAGTGGGGCGTCAACGTTCAGTGCCTCAGTGGTAGCCC
TGCCAACCTGCAGGTCTACCAGGCCCTCATGCGCCCTCACGACCGTCTCA
TGGGTCTTGACCTCCCCCACGGTGGTCACTTGAGTCACGGTTACCAGACT
CCCGCCAGAAACAAATGGAGGTGTCCCTCGTGGACAGCGATCCTGAGATC
GCTCAGATCATGATGGCTACCTACGCTCTCTCTCCGGCTCACCGGAACGA
TCTCTGCTGTCTCTACCTACTTCGAGACCTTCCCCTACCGTGTCAACCTT
GAGACCGGTATCATTGACTACGATCAACTCGAGGCCAACGCTGAGCTCTA
CCGCCCCAAGTGCTTGGTCGCTGGTACCTCCGCCTACTGCCGCCTGATCG
ACTACGCTCGCATGCGCAAGATCGCTGACAAGGTCGGCGCCTACCTCATT
GTCGACATGGCTCACATCTCTGGTCTGATTGCCGCCGGTGTCATCCCCTC
CCCCTTCGAGTACGCCGATGTTGTCACCACCACCACCCACAAGTCCCTCC
GTGGTCCCCGTGGTGCCATGATCTTCTTCCGCAAGGGTGTCCGCAGCACT
GACCCCAAGACCGGCAAGGACATCATGTATGACCTTGAGGGCCCCATCAA
CTTCTCTGTCTTCCCTGGTCACCAGGGTGGTCCCCACAACCACACCATCA
CTGCTCTGGCTGTTGCCCTTAAGCAGGTTGATACCCCCGAGTTCAAGCAG
TACCAGCAGCAGGTCATCAAGAACGCCAAGGCCCTCGAGGAGGAGTTCAA
GGCTCTCGGTCACAAGCTCGTCTCTGACGGCACTGACAGCCACATGGTCC
TTGTCGACCTCCGCAACAAGAGCCTGGACGGTGCTCGTGTCGAGGCTGTC
CTCGAGCAGATCAACATTGCTTGCAACAAGAACTCCATCCCCGGTGACAA
GTCTGCTCTGACCCCCTGCGGTATCCGTATCGGTGCCCCCGCCATGACCA
CCCGTGGTATGGGTGAGGAGGACTTCAAGCGCATTGCCCGCTACATCGAC
CAGTCCATCAACCTCTGCAAGAAGGTCCAGAGCGAGCTTCCCAAGGAGGC
CAACAAGCTCAAGGACTTCAAGGCTAAGGTTGCCTCCGAGACCGTCCCTG
AGATCCTCAGCCTCCGCAAGGAGGTCGCTGAGTGGGCCAGCACCTTCCCC
CTCCCCGTCTAAGAGAAGGAAATCCAACGTCAGCGCGAATCCATCGTCCT
GATCGCCTCGGAGAACTTCACCTCCCACGCTGTCTTCGATGCTCTGGGTT
CCCCCATGAGCAACAAGTACTCCGAGGGTTACCCCGGCGCTCGCTACTAC
GGTGGCAACCAGCACATCGATGCCATCGAGCTTACCTGCCAGGCTCGTGC
CCTCAAGGCTTTCAACCTGGACCCCGCCAAGTGGGGCGTCAACGTTCAGT
GCCTCAGTGGTAGCCCTGCCAACCTGCAGGTCTACCAGGCCCTCATGCGC
CCTCACGACCGTCTCATGGGTCTTGACCTCCCCCACGGTGGTCACTTGAG
TCACGGTTACCAGACTCCCGCCAGAAACAAATGGAGGTGTCCCTCGTGGA
CAGCGATCCTGAGATCGCTCAGATCATGATGGCTACCTACGCTCTCTCTC
CGGCTCACCGGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004372 | glycine hydroxymethyltransferase activity |
| GO:0030170 | pyridoxal phosphate binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035999 | tetrahydrofolate interconversion |
| GO:0019264 | glycine biosynthetic process from serine |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR019798 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR001085 |
| DBxref | InterPro:IPR039429 |
| DBxref | PFAM:PF00464 |
| DBxref | PFAM:PF00155 |
| Product | cytosolic serine hydroxymethyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851947.1 | supercontig | KZ851947.1:87311..89393 - |
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