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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851948.1:77684..79108+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_374249-T1 ID=M747DRAFT_374249-T1|Name=M747DRAFT_374249-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1425bp|location=Sequence derived from alignment at KZ851948.1:77684..79108+ (Aspergillus niger ATCC 13496)
CGAAGCAACATAAGCTACTGCTATTGTATTCCTCTGGGTATGTCTAGATG
ATTTTCCACAAATAGCTCGATCCAATCAATACTCAATATACTGATGTATA
AATAGACATAAACGCATTGCACTCCGAATGAGTTACTTGTGCTGCGTGAT
TACCACCAGACTCACTACTAATTATTGAACCATACTATTGTGATTGGCTC
TTACACATCTCTACTGCACTCAATTTCCTTGCGTTCAAGAAGATACCCCT
CTTGCTTTCTCAAACTTGGCACGTGAATGCCTTCGTAGGCGCCTTACTCA
AGATCAAGAAAAACCATCCATAGAGCTATATCATCTATCAAGAGAACTAC
CAGTCACTACAAAATGCCTATCACAGGGTAAGCGCTGATCAGTCATCACA
TATACTCACATCATGCTGACTCCAACCAACCAGAGTCTACTTCATCCCCT
CCAACCCAAATGCATCCACAGGGCTAGCGACTATCACAGAGCGCCTACAC
ACAGCCCTAGCAGACGAGCCAACATTAGTAGGCCGTTGGTTCCTCGAACA
CCGACTAATGCGCGATACTCCATCATGTGTTCCTGCCTCAGCATCCCAGC
GCCAAGTACAACCGCGCTATATGCAATTCCTATCACTGTCTTTTCACTCT
AACCACGGCTTCATCTACACCTCTGAAGCACTAGAGAAAAGCACTCATCA
TTCCACCACCAGTGTTAGCACCACGCCAGCTGGCTCACCCACCAATTCTA
CTGCTCAAAGTGGAGCTCCAGGCGCAACAGCGCCCACCCCTTCCACCCCA
TCTAATGCTGCTGCACAGTCAGGAGGACCAATGGTGATGACCACCGTGCC
GCTTCCATCCTGTAATGCACTTTTCCAGCACTTCGGCTACGCCTGCCAGC
CTTTCTGGTGCCATCGACACACGGTAACCGTACCAGGCGGTGTGGTCTAC
GATGTGGGCGATTTCCGAGTCCGAGTGGGTGATGTACGACAGACTCAGCC
AGCAGCGAGGGTGCGCGGAACAGTTGTGGAAATTGAATGGCGGGGTCCGT
GCATAGTTGATGCGATTTCAGCACCACGGAATTCGAGCGACGGACAAATA
GCTGATGATGGCGACTCCGGGATTGATATGGCGTTCCCGGATGCTATTGA
AGACGCGGATATTGATGCAGAGTATGCGGCTATTGCGGCGTTGATTAGGG
AGTTCTGGGCGAGACTCGGCATTGAAGGAGCCAGAGAAGCTATTTTGTTG
CCGGATGTAGGCAAGGAAGCCAAGGATCGGTTGAGGAGATTGAAGCAGAA
GGGCCGAAATACTGTTTCTAACGAGGCGAGTCTACAGCAAGCGGAGGAGG
ATCCGGATCCGGATGCGGGTGTGGATGTGGCGAGGCAGTTTATGGAGATT
TTTAGATTTAATCGGTAAAGATAGC back to topCoding sequence (CDS) from alignment at KZ851948.1:77684..79108+ >M747DRAFT_374249-T1 ID=M747DRAFT_374249-T1|Name=M747DRAFT_374249-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1998bp|location=Sequence derived from alignment at KZ851948.1:77684..79108+ (Aspergillus niger ATCC 13496)
ATGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCAC
AGGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGC
CAACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGCGATACT
CCATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTA
TATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACA
CCTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGC
ACCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCC
AGGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGT
CAGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCA
CTTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACA
CACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAG
TCCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGA
ACAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTC
AGCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCG
GGATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCA
GAGTATGCGGCTATTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGG
CATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAG
CCAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCT
AACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGG
TGTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGATTTAATCGGTAAA
TGCCTATCACAGGAGTCTACTTCATCCCCTCCAACCCAAATGCATCCACA
GGGCTAGCGACTATCACAGAGCGCCTACACACAGCCCTAGCAGACGAGCC
AACATTAGTAGGCCGTTGGTTCCTCGAACACCGACTAATGCGCGATACTC
CATCATGTGTTCCTGCCTCAGCATCCCAGCGCCAAGTACAACCGCGCTAT
ATGCAATTCCTATCACTGTCTTTTCACTCTAACCACGGCTTCATCTACAC
CTCTGAAGCACTAGAGAAAAGCACTCATCATTCCACCACCAGTGTTAGCA
CCACGCCAGCTGGCTCACCCACCAATTCTACTGCTCAAAGTGGAGCTCCA
GGCGCAACAGCGCCCACCCCTTCCACCCCATCTAATGCTGCTGCACAGTC
AGGAGGACCAATGGTGATGACCACCGTGCCGCTTCCATCCTGTAATGCAC
TTTTCCAGCACTTCGGCTACGCCTGCCAGCCTTTCTGGTGCCATCGACAC
ACGGTAACCGTACCAGGCGGTGTGGTCTACGATGTGGGCGATTTCCGAGT
CCGAGTGGGTGATGTACGACAGACTCAGCCAGCAGCGAGGGTGCGCGGAA
CAGTTGTGGAAATTGAATGGCGGGGTCCGTGCATAGTTGATGCGATTTCA
GCACCACGGAATTCGAGCGACGGACAAATAGCTGATGATGGCGACTCCGG
GATTGATATGGCGTTCCCGGATGCTATTGAAGACGCGGATATTGATGCAG
AGTATGCGGCTATTGCGGCGTTGATTAGGGAGTTCTGGGCGAGACTCGGC
ATTGAAGGAGCCAGAGAAGCTATTTTGTTGCCGGATGTAGGCAAGGAAGC
CAAGGATCGGTTGAGGAGATTGAAGCAGAAGGGCCGAAATACTGTTTCTA
ACGAGGCGAGTCTACAGCAAGCGGAGGAGGATCCGGATCCGGATGCGGGT
GTGGATGTGGCGAGGCAGTTTATGGAGATTTTTAGATTTAATCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013921 |
| DBxref | PFAM:PF08612 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851948.1 | supercontig | KZ851948.1:77684..79108 + |
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