You are here

Home

M747DRAFT_374583-T1, M747DRAFT_374583-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_374583-T1
Unique NameM747DRAFT_374583-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851953.1:163715..165009+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_374583-T1 ID=M747DRAFT_374583-T1|Name=M747DRAFT_374583-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1295bp|location=Sequence derived from alignment at KZ851953.1:163715..165009+ (Aspergillus niger ATCC 13496)
AGATGACAAACTTAACCACCACGTCGAAGATCCGGCGGGCATGCGATCGG
TGCCATACTCAGAAGTTGCGCTGTATCCGGTCGGAACATGAGAGGGCCTG
TGTTCGATGTGCTCGCGCCAGCCTCGTCTGCGTCTTCAGTCCGCCAACCC
GGCATCGCACATCGCCCAGCGAGGCCAAGAGGCTTGGGTGCTCTCAAGCT
TTAAATAGCGCCCTCCATCCGACGAGGACGGGCTCCCTGTGGTCCCCCGA
TTCGTCCACCCTGCTGGAGCTCGACCCGTCCGCAGCGCCTCTTCATCCGG
GGCTGCCATGCCCGAAGCCGGTGGGGATGCTCGACCCCTTGCCCGCCGCA
ACATGCGACCCTTTTACCCCGGTCGAGGGGTTCAGTTGGGACCATCTGCT
GAACACCTCACCCCCCGTGGCCCTCGGGGATCTCATCCCCGGCGAGCTAG
CATTGACGACCACCACCTTTTCTACCTCTACCTCCCCCTTGTCGCCCAGC
CATCCCCTCCAGACCCCGCCGGCCTCACGCATAGCCCCCCAGCCGCACAG
TAGCCCTCCCGAGCCCACTTCCATTGCAAACCGCACCGAATGGGTGGCAG
AGCTCGCCCGCCTCAACGTCAAGCTGCTCACACACGCCCAGCAGATTGCG
CACCGACAGCCACGAGAAACGCCACGGAGGTCCTCGCCCACCTCGGCCCC
TGACCATGACTTGGATGAGGACCGACCGACCTTCGCCGTGGATCAAACCT
TCCTGTTGTCTCAGCAGCTCATCGACCTCCTGAGCCAGCAGGACGCCCCG
TCCGCCACGGGGGCACCCGCGCAGAGCCCGCCTCCTGGCCCACCGCAGCT
GCCTCGAACTCTGCGCAGCCTGGACCCCGCGTCCATCCTGCTCGTGCTGT
CGTGCCACCTGCGGGTTCTAGAAAGCTATAGCCAGATGTTTGCCCACGTT
CAAGCATGGCAGGAGCACGGCGGCGCCTCCCTCGCCGCCACGGGGATCGG
GCTCCCGGCCCTCAACATCGGCGCCTTCTCCCTGCCTGCCTCCTCCCCGC
GGTTGCAGATCGCCGTCATTCTGCAGCTCGCGGAGCAATTGCTCAGTCGG
CTGCGCGAGATGGTCTTGCTCCCGGATGTGCCGGCACTGGCAGCCACCCG
AAGCTTGTGCCATGAGATGGGCGCCAGTCACCATTCGACGGCGATGCACG
AGGTGGTGTCCATCACTCTCCAGGCCATCAGTGCGCGGGAGCTAGGGATG
ACCAAGACGATCGCTTGGATCAAGCGGTCGTTGCAGGAGAGCTAG
back to top

Coding sequence (CDS) from alignment at KZ851953.1:163715..165009+

>M747DRAFT_374583-T1 ID=M747DRAFT_374583-T1|Name=M747DRAFT_374583-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1295bp|location=Sequence derived from alignment at KZ851953.1:163715..165009+ (Aspergillus niger ATCC 13496)
AGATGACAAACTTAACCACCACGTCGAAGATCCGGCGGGCATGCGATCGG
TGCCATACTCAGAAGTTGCGCTGTATCCGGTCGGAACATGAGAGGGCCTG
TGTTCGATGTGCTCGCGCCAGCCTCGTCTGCGTCTTCAGTCCGCCAACCC
GGCATCGCACATCGCCCAGCGAGGCCAAGAGGCTTGGGTGCTCTCAAGCT
TTAAATAGCGCCCTCCATCCGACGAGGACGGGCTCCCTGTGGTCCCCCGA
TTCGTCCACCCTGCTGGAGCTCGACCCGTCCGCAGCGCCTCTTCATCCGG
GGCTGCCATGCCCGAAGCCGGTGGGGATGCTCGACCCCTTGCCCGCCGCA
ACATGCGACCCTTTTACCCCGGTCGAGGGGTTCAGTTGGGACCATCTGCT
GAACACCTCACCCCCCGTGGCCCTCGGGGATCTCATCCCCGGCGAGCTAG
CATTGACGACCACCACCTTTTCTACCTCTACCTCCCCCTTGTCGCCCAGC
CATCCCCTCCAGACCCCGCCGGCCTCACGCATAGCCCCCCAGCCGCACAG
TAGCCCTCCCGAGCCCACTTCCATTGCAAACCGCACCGAATGGGTGGCAG
AGCTCGCCCGCCTCAACGTCAAGCTGCTCACACACGCCCAGCAGATTGCG
CACCGACAGCCACGAGAAACGCCACGGAGGTCCTCGCCCACCTCGGCCCC
TGACCATGACTTGGATGAGGACCGACCGACCTTCGCCGTGGATCAAACCT
TCCTGTTGTCTCAGCAGCTCATCGACCTCCTGAGCCAGCAGGACGCCCCG
TCCGCCACGGGGGCACCCGCGCAGAGCCCGCCTCCTGGCCCACCGCAGCT
GCCTCGAACTCTGCGCAGCCTGGACCCCGCGTCCATCCTGCTCGTGCTGT
CGTGCCACCTGCGGGTTCTAGAAAGCTATAGCCAGATGTTTGCCCACGTT
CAAGCATGGCAGGAGCACGGCGGCGCCTCCCTCGCCGCCACGGGGATCGG
GCTCCCGGCCCTCAACATCGGCGCCTTCTCCCTGCCTGCCTCCTCCCCGC
GGTTGCAGATCGCCGTCATTCTGCAGCTCGCGGAGCAATTGCTCAGTCGG
CTGCGCGAGATGGTCTTGCTCCCGGATGTGCCGGCACTGGCAGCCACCCG
AAGCTTGTGCCATGAGATGGGCGCCAGTCACCATTCGACGGCGATGCACG
AGGTGGTGTCCATCACTCTCCAGGCCATCAGTGCGCGGGAGCTAGGGATG
ACCAAGACGATCGCTTGGATCAAGCGGTCGTTGCAGGAGAGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_374583M747DRAFT_374583Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374583-T1.exon1M747DRAFT_374583-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374583-T1.cdsM747DRAFT_374583-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_374583-T1M747DRAFT_374583-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519531.3
NoteantiSMASH:Cluster_8519531.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851953.1supercontigKZ851953.1:163715..165009 +
Powered by Drupal