You are here

Home

M747DRAFT_39816-T1, M747DRAFT_39816-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_39816-T1
Unique NameM747DRAFT_39816-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851915.1:25925..27595+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_39816-T1 ID=M747DRAFT_39816-T1|Name=M747DRAFT_39816-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1671bp|location=Sequence derived from alignment at KZ851915.1:25925..27595+ (Aspergillus niger ATCC 13496)
AACCGCGCAACAAAGAGTGCCGCCGATCGCCCCCAGCGTTTATCGGCTTC
GCCTGCGAAGCCCAGCGGCTTTCGCTGTCTCGCCTCCACCGTTCGTATCC
GTCCTTTATGTCCGGACCCAATGCGCCTCTTTAGCAAATTTCACGCGGTC
TGCGCCTTGGCTGTGTGCAGCATTCTCCTGTCAGCCTCCTTTCTTGCCTC
TCAGCATTATTATCGCCGGGTAGTCTTGACAAAAGAGCCCACGTCAGACT
TCCACGCCACAGCATCTTTCGACCGTCGCCTAGTCGTCTTTGGTGACTCG
TGGAGCGATAACAATGCAGCCGAGCTTCAAGGATCTGTATGGACGGACTG
GCTTTGTAACTCGGTGAGTGTGAAAGCTACTTGGCTGGATCGAAGTGGTA
AGCTAATTACTCGGCTTAGTTCTCATGTCACCATGAAAACTTAGCAGAGA
CAGCCAAGTCTTTGAGAGGAAACTACATTGGCTCTGTGGTGGACAACACG
GAGCTGTCGGGCTCCTTACTCAACCTCTACAAGTCTCCATTGGCGGATCT
GAAAGCTCAGGTCGCCAATTGGATTGCGGCGGAGACGGAAGCCACGAGAG
AGATGGATGCGACTGCAATTAGCATGCGTCAGAATGGCACCGTCGTGGTC
GTCTCCTTTGGTGTATGGGACTTGTGGAACGTAATGGCCAAGACGTACGA
GGATGCATCCCATGCAGTCGATCGCAATATCAAAGTCATTATGGAGGAGC
TGAATTTGCTGGCCGAGACATGGGGCAGCAATGACCTCAAGATCATCCTA
ACATTAGCACCAGATGTAACCTTCCTGCCGGCCTATAGAGCGCAGGGGGC
GCCGCAGATTACCAAGCACAAAGATGCCGTGAGGATCGCAGACTATTGGA
ACGGAGAGCTCCGCAATAACGCCGAAGATTGGTCAAACGGCACGATCTAT
TTGTTCGACACCAACTCGTTTCTGGCGGACCAGATTCGCGACTGGCAACT
TTTTGCTGCAGGGATCGAGGAAGAGAATGGATTGGGGAGGAACGAGGATC
CCGGTTGGGAGAATGTTGAAGACGCATGCGTCCAAAGCAGCCAGCAGTGG
ATGGTGACGTCAGGTGCGCAACAGTGCGACCGTCCGGAGAAATTTCTGTT
CTGGTAAGGACAAGGCATTATGATTGGCGCCCATTGACTTGATCGAGTGC
TGACCGTATCATTTTTCAGGAACGATATGCACCTGGGCCCCTCAGCACAT
AGGCTTCTGGGCGCGGAAGTGTTCCATGGAATTGAAGAGATGTGGCTCCG
ATGAAATTCCCTTAAACATCAAAATAAGAGAGCAGAGAAAAGAGAAAAAA
ATTCCAAAAGCGCAACCGATGAGGTCTTACTTGTTTTTTTTCATTACTTC
TTGAGACGTAATTTCGCCAAGGACATGATGGGGGAAACTTGTTCTGTAGA
TGATTAGACATCGGCCGCTTCCCGGGACTATCAAACGCTGATGAACAGCA
CGATCAAATGGCGGCCTGCTTCTCTTATCTCCATTGAGCATGCCGCCCGA
CTATTCGACTGGTCTCTAGACGATGTGTCAATAGGTTTGAGACCATGTCT
TTCTCCCCGCTCTGAGAATGGATGAGCAAGAGGAAAGAGTTTGGACTGGG
GGAACACAACTGTTTCGAATC
back to top

Coding sequence (CDS) from alignment at KZ851915.1:25925..27595+

>M747DRAFT_39816-T1 ID=M747DRAFT_39816-T1|Name=M747DRAFT_39816-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3186bp|location=Sequence derived from alignment at KZ851915.1:25925..27595+ (Aspergillus niger ATCC 13496)
ATGCGCCTCTTTAGCAAATTTCACGCGGTCTGCGCCTTGGCTGTGTGCAG
CATTCTCCTGTCAGCCTCCTTTCTTGCCTCTCAGCATTATTATCGCCGGG
TAGTCTTGACAAAAGAGCCCACGTCAGACTTCCACGCCACAGCATCTTTC
GACCGTCGCCTAGTCGTCTTTGGTGACTCGTGGAGCGATAACAATGCAGC
CGAGCTTCAAGGATCTGTATGGACGGACTGGCTTTGTAACTCGTTCTCAT
GTCACCATGAAAACTTAGCAGAGACAGCCAAGTCTTTGAGAGGAAACTAC
ATTGGCTCTGTGGTGGACAACACGGAGCTGTCGGGCTCCTTACTCAACCT
CTACAAGTCTCCATTGGCGGATCTGAAAGCTCAGGTCGCCAATTGGATTG
CGGCGGAGACGGAAGCCACGAGAGAGATGGATGCGACTGCAATTAGCATG
CGTCAGAATGGCACCGTCGTGGTCGTCTCCTTTGGTGTATGGGACTTGTG
GAACGTAATGGCCAAGACGTACGAGGATGCATCCCATGCAGTCGATCGCA
ATATCAAAGTCATTATGGAGGAGCTGAATTTGCTGGCCGAGACATGGGGC
AGCAATGACCTCAAGATCATCCTAACATTAGCACCAGATGTAACCTTCCT
GCCGGCCTATAGAGCGCAGGGGGCGCCGCAGATTACCAAGCACAAAGATG
CCGTGAGGATCGCAGACTATTGGAACGGAGAGCTCCGCAATAACGCCGAA
GATTGGTCAAACGGCACGATCTATTTGTTCGACACCAACTCGTTTCTGGC
GGACCAGATTCGCGACTGGCAACTTTTTGCTGCAGGGATCGAGGAAGAGA
ATGGATTGGGGAGGAACGAGGATCCCGGTTGGGAGAATGTTGAAGACGCA
TGCGTCCAAAGCAGCCAGCAGTGGATGGTGACGTCAGGTGCGCAACAGTG
CGACCGTCCGGAGAAATTTCTGTTCTGGAACGATATGCACCTGGGCCCCT
CAGCACATAGGCTTCTGGGCGCGGAAGTGTTCCATGGAATTGAAGAGATG
TGGCTCCGATGAATGCGCCTCTTTAGCAAATTTCACGCGGTCTGCGCCTT
GGCTGTGTGCAGCATTCTCCTGTCAGCCTCCTTTCTTGCCTCTCAGCATT
ATTATCGCCGGGTAGTCTTGACAAAAGAGCCCACGTCAGACTTCCACGCC
ACAGCATCTTTCGACCGTCGCCTAGTCGTCTTTGGTGACTCGTGGAGCGA
TAACAATGCAGCCGAGCTTCAAGGATCTGTATGGACGGACTGGCTTTGTA
ACTCGTTCTCATGTCACCATGAAAACTTAGCAGAGACAGCCAAGTCTTTG
AGAGGAAACTACATTGGCTCTGTGGTGGACAACACGGAGCTGTCGGGCTC
CTTACTCAACCTCTACAAGTCTCCATTGGCGGATCTGAAAGCTCAGGTCG
CCAATTGGATTGCGGCGGAGACGGAAGCCACGAGAGAGATGGATGCGACT
GCAATTAGCATGCGTCAGAATGGCACCGTCGTGGTCGTCTCCTTTGGTGT
ATGGGACTTGTGGAACGTAATGGCCAAGACGTACGAGGATGCATCCCATG
CAGTCGATCGCAATATCAAAGTCATTATGGAGGAGCTGAATTTGCTGGCC
GAGACATGGGGCAGCAATGACCTCAAGATCATCCTAACATTAGCACCAGA
TGTAACCTTCCTGCCGGCCTATAGAGCGCAGGGGGCGCCGCAGATTACCA
AGCACAAAGATGCCGTGAGGATCGCAGACTATTGGAACGGAGAGCTCCGC
AATAACGCCGAAGATTGGTCAAACGGCACGATCTATTTGTTCGACACCAA
CTCGTTTCTGGCGGACCAGATTCGCGACTGGCAACTTTTTGCTGCAGGGA
TCGAGGAAGAGAATGGATTGGGGAGGAACGAGGATCCCGGTTGGGAGAAT
GTTGAAGACGCATGCGTCCAAAGCAGCCAGCAGTGGATGGTGACGTCAGG
TGCGCAACAGTGCGACCGTCCGGAGAAATTTCTGTTCTGGAACGATATGC
ACCTGGGCCCCTCAGCACATAGGCTTCTGGGCGCGGAAGTGTTCCATGGA
ATTGAAGAGATGTGGCTCCGATGAATGCGCCTCTTTAGCAAATTTCACGC
GGTCTGCGCCTTGGCTGTGTGCAGCATTCTCCTGTCAGCCTCCTTTCTTG
CCTCTCAGCATTATTATCGCCGGGTAGTCTTGACAAAAGAGCCCACGTCA
GACTTCCACGCCACAGCATCTTTCGACCGTCGCCTAGTCGTCTTTGGTGA
CTCGTGGAGCGATAACAATGCAGCCGAGCTTCAAGGATCTGTATGGACGG
ACTGGCTTTGTAACTCGTTCTCATGTCACCATGAAAACTTAGCAGAGACA
GCCAAGTCTTTGAGAGGAAACTACATTGGCTCTGTGGTGGACAACACGGA
GCTGTCGGGCTCCTTACTCAACCTCTACAAGTCTCCATTGGCGGATCTGA
AAGCTCAGGTCGCCAATTGGATTGCGGCGGAGACGGAAGCCACGAGAGAG
ATGGATGCGACTGCAATTAGCATGCGTCAGAATGGCACCGTCGTGGTCGT
CTCCTTTGGTGTATGGGACTTGTGGAACGTAATGGCCAAGACGTACGAGG
ATGCATCCCATGCAGTCGATCGCAATATCAAAGTCATTATGGAGGAGCTG
AATTTGCTGGCCGAGACATGGGGCAGCAATGACCTCAAGATCATCCTAAC
ATTAGCACCAGATGTAACCTTCCTGCCGGCCTATAGAGCGCAGGGGGCGC
CGCAGATTACCAAGCACAAAGATGCCGTGAGGATCGCAGACTATTGGAAC
GGAGAGCTCCGCAATAACGCCGAAGATTGGTCAAACGGCACGATCTATTT
GTTCGACACCAACTCGTTTCTGGCGGACCAGATTCGCGACTGGCAACTTT
TTGCTGCAGGGATCGAGGAAGAGAATGGATTGGGGAGGAACGAGGATCCC
GGTTGGGAGAATGTTGAAGACGCATGCGTCCAAAGCAGCCAGCAGTGGAT
GGTGACGTCAGGTGCGCAACAGTGCGACCGTCCGGAGAAATTTCTGTTCT
GGAACGATATGCACCTGGGCCCCTCAGCACATAGGCTTCTGGGCGCGGAA
GTGTTCCATGGAATTGAAGAGATGTGGCTCCGATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_39816M747DRAFT_39816Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_39816-T1M747DRAFT_39816-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_39816-T1.utr5p1M747DRAFT_39816-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_39816-T1.exon1M747DRAFT_39816-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_39816-T1.exon2M747DRAFT_39816-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_39816-T1.exon3M747DRAFT_39816-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_39816-T1.cdsM747DRAFT_39816-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_39816-T1.utr3p1M747DRAFT_39816-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036514
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851915.1supercontigKZ851915.1:25925..27595 +
Powered by Drupal