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M747DRAFT_41085-T1, M747DRAFT_41085-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_41085-T1
Unique NameM747DRAFT_41085-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851915.1:202599..205595-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_41085-T1 ID=M747DRAFT_41085-T1|Name=M747DRAFT_41085-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2997bp|location=Sequence derived from alignment at KZ851915.1:202599..205595- (Aspergillus niger ATCC 13496)
AGGCCCATCCTATCCTTGTCGCCCTTTTGTCTGAACGGAGGGGCCTCAAG
GAGGCTAGAGAAACTGAGCTAGGCAAATTTCCCAGCGAACCCATGGCGAG
GGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCTTCAGGGCG
CCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTGCGCCCTTC
AAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCCGACAAGGA
GTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGACTGGGTTA
ATGCTTATAGTGAGGCCGAGCGAGCCGGTGAGTTCAGCCCCCCTTCCCTT
GGTCCCGTCCGGCGCAAGGCTCCTCTTCTGTTTGGCTTCTTTAGCGCGAT
CATCATCGTACTGACAGGCTGTGGTGTTTCATGTAGAGCTCGCCTACAAG
CTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTTGAAAAGCT
AGCGCCTCTATTGCACATGGATCCCGTGCTGAAGTTACCTCCGGAGATCA
CCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAACGGCTTCC
TTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGCCTTTGGAG
AGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGCCGTGCATA
CGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCCGAAAATCT
CGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAGAAGAAGCG
CGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACTGGATAACA
ATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGGCGGATATT
GAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGACCGGCGAT
CGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTCAGGAACTG
CCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTAGCCCCCCC
AAATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAGATGAATTG
GCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTGGGCCAAGG
GCCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGGAAGAATCT
CACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGGTTGGTCAG
TGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACACGAAGCGAC
TATGGCATCCGCCTCTCCAAGGCCACTCAAAGTCGGTTCTCTGTCTTCAG
TTCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGCAGCGACAA
GAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCACGAAATTG
CGCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACGAACGCTAT
ATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAACAGGCGTCA
TCTCACTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGGCTCGGGCG
TCTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCGCTTTCGTA
CTTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCCCCATACTC
ATTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGCTATTCAGC
TCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGATCAAGGTC
TGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGCCACGAAAA
AGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAGCGGAAGCA
ACGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCGAAGTGGCC
TGCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCTGGTTTCGG
AGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCTGGCTGTCG
ACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTGACCTTGGC
CCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAACGGGTCTCG
GAACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCCAGGGGGAG
GCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACGAGACCATC
ATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGCCAGAGACT
CCGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTTAGATTCCG
CTGCACGCCAGACAATCGCACGAGCCAACGCCTTTGCTCAAGCGCACCAG
GCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCAGCAGGCGG
TGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACAACCACCAC
GATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCACATAATGCA
CCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATCTCCAACAA
CCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGCTCAAGCTC
CAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGACCACCACCA
CTACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGAGCCTTCCC
TGCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCTCCAATTCG
ACGCGCATAAGATAATTTGCGCAAGCCAGGACCCGAGAATAGTAGGGTGG
GATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAGTTCTTTAC
GGGGCTGTGACCGTCGTATATAACTATCGTCAACGTTGGGGAAAGATGAT
GTGGTATAATATTCGGTCTAAGTTATATTCAGTCCTAAGTGGCTCAT
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Coding sequence (CDS) from alignment at KZ851915.1:202599..205595-

>M747DRAFT_41085-T1 ID=M747DRAFT_41085-T1|Name=M747DRAFT_41085-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5418bp|location=Sequence derived from alignment at KZ851915.1:202599..205595- (Aspergillus niger ATCC 13496)
AGCTCGCCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCG
GTGGTTGAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAGTT
ACCTCCGGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGT
TGGTAACGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGAC
ACCCGCCTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACAT
TGACGCCGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCC
AGCTCCGAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCG
AAACAGAAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGG
ATCACTGGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCG
CAGCGGCGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGAT
CGAGGACCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGA
GTCGTCAGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGA
ACTCTAGCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCT
GCAAAGATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGA
GAACTGGGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATC
ACATGGAAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAG
AAATGGTTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCT
GGACACGAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAGTCGG
TTCTCTGTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCG
GGAAGCAGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAA
GCTTCACGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGAT
TCGACGAACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTC
TGGAACAGGCGTCATCTCACTCCGTTGGACAAGGACTACCCCTCTGTTTT
TCAGGGCTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACG
TCCCCGCTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACT
TTAGCCCCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGT
GAATGCTATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATC
GCTTGATCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATG
ATAGGCCACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTAT
AATCAGCGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCG
GTGCCGAAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTT
CAAGCTGGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGA
AGCTCTGGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAA
ACGTTGACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAAC
ACCAACGGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAAT
CCCTCCAGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCAT
ACGACGAGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTT
GTAGGCCAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAG
CCACTTAGATTCCGCTGCACGCCAGACAATCGCACGAGCCAACGCCTTTG
CTCAAGCGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCG
ATATCAGCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCA
AACACAACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCT
CATCACATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTC
CTCATCTCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGC
TCAAGCTCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAA
TGAGACCACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGA
GTGAGAGCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTT
CAAGCTCCAATTCGACGCGCATAAGATAATTTGCGCAAGCCAGGACCCGA
GAATAGTAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCG
TGTCAGTTCTTTACGGGGCTGTGAATGGCGAGGGACACCGCGCAAACTCC
GATCATCCCTCGTCCCCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCCG
ATCTCACCGCCCCCTCGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTAT
TCCGATGAAACGAGAAGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCCC
CGATGATGTGATGCCGCTCCCCGACTGGGTTAATGCTTATAGTGAGGCCG
AGCGAGCCGAGCTCGCCTACAAGCTTCTACGCACCTTGCGTGCTTCCACT
GTCGCCTCGGTGGTTGAAAAGCTAGCGCCTCTATTGCACATGGATCCCGT
GCTGAAGTTACCTCCGGAGATCACCGCCGAGATCTTTTCCTACCTCGACC
CTCAAACGTTGGTAACGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGC
ATTTTTGACACCCGCCTTTGGAGAGACTTATATATCAGCGAAGGCTGGCG
GGTCGACATTGACGCCGTGCATACGTACGAACAGGAACACTCGGGATTGG
AATCCCCCCAGCTCCGAAAATCTCGGTTGAGGCATATAGACCCGGATCTC
GGTGAACCGAAACAGAAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCG
CGCAGCAGGATCACTGGATAACAATGAGGCCGTGCAAGGAAATGGGCTGC
AGCCCTCCGCAGCGGCGGATATTGAAGGCGATCATCCCATGAGTGATGCG
TCAAACGATCGAGGACCGGCGATCGCACCTGGGCAACAATCATCTAGCGC
CCGCCATGAGTCGTCAGGAACTGCCCAATCGAAGTCACATTTGCAGCAAA
TTTCTACGAACTCTAGCCCCCCCAAATCGCCACTATTAATTCGAATGCCC
AATGGCGCTGCAAAGATGAATTGGCCGCATCTGTATCGGGTACGGAGGCG
GCTGGAAGAGAACTGGGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCC
ATCCGAATCACATGGAAGAATCTCACCAAGAGTGTGTATATGCGATCCAG
TTTACCGAGAAATGGTTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGT
ATGGGACCTGGACACGAAGCGACTATGGCATCCGCCTCTCCAAGGCCACT
CAAAGTCGGTTCTCTGTCTTCAGTTCGACCCCCGCCCATCTGAAGATATC
ATTGTGTCGGGAAGCAGCGACAAGAATGTGATAATTTGGCGCTTTTCCAC
TGGAGAGAAGCTTCACGAAATTGCGCCAGCTCATGATGACTCTGTCCTGA
ATCTCCGATTCGACGAACGCTATATAGTAACTTGCTCCAAGGACAAGCTT
ATCAAGGTCTGGAACAGGCGTCATCTCACTCCGTTGGACAAGGACTACCC
CTCTGTTTTTCAGGGCTCGGGCGTCTCCTATCCGTCGTATATTGTCAACA
CAAGCGACGTCCCCGCTTTCGTACTTGAAGCCGAAATCGCCAAGAATCAC
ATCAGAACTTTAGCCCCATACTCATTGCTAATGATCCTTGACGGACATAC
AGCCGCAGTGAATGCTATTCAGCTCAACGAGGATGAGATCGTGTCCGCCT
CGGGCGATCGCTTGATCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGA
AAGACAATGATAGGCCACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAG
CAAACGTATAATCAGCGGAAGCAACGATGATACAGTTCGCATTTTCGACC
ACGCCTCCGGTGCCGAAGTGGCCTGCCTGCACGGACATGCCAACCTCGTT
CGGACAGTTCAAGCTGGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTT
ACGACTGGAAGCTCTGGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCA
CCAACGCAAACGTTGACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATAT
CAGCAGAACACCAACGGGTCTCGGAACCCCAGAGACATCAAAGCACTGGG
CGCCAAAATCCCTCCAGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCT
CCGGCTCATACGACGAGACCATCATCATCTGGAAAAAGGATAATGAAGGC
CGCTGGGTTGTAGGCCAGAGACTCCGACAGGCAGACGCCGCTGCGAATGC
CTCATACAGCCACTTAGATTCCGCTGCACGCCAGACAATCGCACGAGCCA
ACGCCTTTGCTCAAGCGCACCAGGCGCAACAAGCCCAAGCTACCATGGCA
GCCGCCGCGATATCAGCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCA
GCAGCATCAAACACAACCACCACGATTGCCTACAACCAACTCCAACACCC
ACGACCCCTCATCACATAATGCACCCTGGCCCGCGCACCTAGCCTTGAAC
CCGGCCCTCCTCATCTCCAACAACCTTCCCCCCACCGTCCAGCAAAGCAC
ATCTCAAGCTCAAGCTCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCG
GCGCTCCAATGAGACCACCACCACTACCACCGCATGCTCAGCAACAGCAA
CACCCCCGAGTGAGAGCCTTCCCTGCCGCCCCCCACCAACCACCTACCTC
GAGGATCTTCAAGCTCCAATTCGACGCGCATAAGATAATTTGCGCAAGCC
AGGACCCGAGAATAGTAGGGTGGGATTTTACTGCTGATGATGAGGAACTC
AAAGAGGCGTGTCAGTTCTTTACGGGGCTGTGAATGGCGAGGGACACCGC
GCAAACTCCGATCATCCCTCGTCCCCGGCTGCTTCAGGGCGCCGCCAGTT
ATCCCTCCGATCTCACCGCCCCCTCGCTGTCTGCGCCCTTCAAGCTCGAC
GAGGGTTATTCCGATGAAACGAGAAGCCAGCCCGACAAGGAGTTTTTGAA
TTCGCCCCCCGATGATGTGATGCCGCTCCCCGACTGGGTTAATGCTTATA
GTGAGGCCGAGCGAGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_41085M747DRAFT_41085Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_41085-T1M747DRAFT_41085-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_41085-T1.cdsM747DRAFT_41085-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_41085-T1.utr3p1M747DRAFT_41085-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_41085-T1.exon2M747DRAFT_41085-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_41085-T1.exon1M747DRAFT_41085-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_41085-T1.utr5p1M747DRAFT_41085-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box and WD domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851915.1supercontigKZ851915.1:202599..205595 -
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