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M747DRAFT_44252-T1, M747DRAFT_44252-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_44252-T1
Unique NameM747DRAFT_44252-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:61214..62055+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_44252-T1 ID=M747DRAFT_44252-T1|Name=M747DRAFT_44252-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=842bp|location=Sequence derived from alignment at KZ851916.1:61214..62055+ (Aspergillus niger ATCC 13496)
ACTGGCTCCTCATTCTGCACCTACTTATACAAACCTACAGACGCTCTCAC
ACCAGCCACTACTTTGAAATAAAACCAAGCCCAACAACCTCGCATAGGAG
AGTGCAGTCAATCTACTCTCACACACTTCAAACCGACTTAAACACCTCTT
ATCAAAATGTCCGAACCCGGCCCCGAATCAATCCCTACCAGCGCAGACCC
GCGCAGCAAACGTCCCACCAAACGCCGCGCCGTGACAGCGCACGATGAAC
ACGCAACACAAATCGAGTCTCTCTTCCGCGATCCCACAAAAGAAATCAAA
CTTCCGGACCCCTCCAAGCAACGGACCTCGACATCGCTTCCCCCGCCGCC
AGAGATTGTCGCCAACGTCCAGGGTTCCTCTGCTGGTGCGGGGTCGGGAG
AATTCCATGTCTACAAGGCGAGTCGGCGGAGGGAGTACGAGCGCCAGCGG
CTGATGCAGAGCGAGGTCGACAAGGAGAAGGAGGATAAGGAGTGGGAGCA
GAAGCGGGAGGAAGCGCGGAGGAAGGATGAAGAGAAGACGGAGAAGAATC
GGAAGAAGAGGGAGAAGCGGAATGCCAAAAAGGGGAAGAAGGGTGGCAGT
GGTGCGACGAATGGCGGGGATAAGATGGCTGTTGATGAGACGGGGAAGAA
GGTGGTAGGTGGTGCCGATGGGGATAAGAAGGATGTAATTGAGGACGGGG
ATGGTCCTGAGGAGGTTACTGAGGTGCCAGGGGTGATTATCCATGATGAC
TGAATAGGGAAGACGGACATATATACGGGCTGCTGGGGAAACGGGCATAC
GAAGAAGGCTAAAGATTGTACGATATGAAGATACCCATTGTA
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Coding sequence (CDS) from alignment at KZ851916.1:61214..62055+

>M747DRAFT_44252-T1 ID=M747DRAFT_44252-T1|Name=M747DRAFT_44252-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=597bp|location=Sequence derived from alignment at KZ851916.1:61214..62055+ (Aspergillus niger ATCC 13496)
ATGTCCGAACCCGGCCCCGAATCAATCCCTACCAGCGCAGACCCGCGCAG
CAAACGTCCCACCAAACGCCGCGCCGTGACAGCGCACGATGAACACGCAA
CACAAATCGAGTCTCTCTTCCGCGATCCCACAAAAGAAATCAAACTTCCG
GACCCCTCCAAGCAACGGACCTCGACATCGCTTCCCCCGCCGCCAGAGAT
TGTCGCCAACGTCCAGGGTTCCTCTGCTGGTGCGGGGTCGGGAGAATTCC
ATGTCTACAAGGCGAGTCGGCGGAGGGAGTACGAGCGCCAGCGGCTGATG
CAGAGCGAGGTCGACAAGGAGAAGGAGGATAAGGAGTGGGAGCAGAAGCG
GGAGGAAGCGCGGAGGAAGGATGAAGAGAAGACGGAGAAGAATCGGAAGA
AGAGGGAGAAGCGGAATGCCAAAAAGGGGAAGAAGGGTGGCAGTGGTGCG
ACGAATGGCGGGGATAAGATGGCTGTTGATGAGACGGGGAAGAAGGTGGT
AGGTGGTGCCGATGGGGATAAGAAGGATGTAATTGAGGACGGGGATGGTC
CTGAGGAGGTTACTGAGGTGCCAGGGGTGATTATCCATGATGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_44252M747DRAFT_44252Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_44252-T1.utr5p1M747DRAFT_44252-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_44252-T1.exon1M747DRAFT_44252-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_44252-T1.cdsM747DRAFT_44252-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_44252-T1.utr3p1M747DRAFT_44252-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_44252-T1M747DRAFT_44252-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009548
DBxrefPFAM:PF06658
ProductDUF1168-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:61214..62055 +
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