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M747DRAFT_46636-T1, M747DRAFT_46636-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_46636-T1
Unique NameM747DRAFT_46636-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:514082..515050-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_46636-T1 ID=M747DRAFT_46636-T1|Name=M747DRAFT_46636-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=969bp|location=Sequence derived from alignment at KZ851916.1:514082..515050- (Aspergillus niger ATCC 13496)
TTTCAGAGTCAATTATTGAGTAAGTTGCTCTCCTGCGCGCCTTTCCCCTC
TTGGTGTCATTTGACTTGCGACCGCGATCCCTCTTGTTTGGGCGCGCGCA
AACGGCTTATCCGCACCTCCAACCACCACTTGCACTGCGCACTCTGTCGC
ATCACTTCCTGTGCTCTTTAATCCTCATATTGTTGTCGCTGTCCTTTTTT
CCTGCTACTTTTGGTGTCAACTGGGTCACTCCCTGCTTGACTTCTGGATC
ATTCTGCCTACATCACTCAAAGCCAACTTCCAAGTACTAACGATCGCATA
GAGCTCAATAATCAAAATGCCCAAGGAGAAGACCACCCGCAAGACCAAGC
CCCGTGGCACTGAGCGCAGAAAGAAGGGTATGTATGCCTTGCTCTATCTT
CGGAACTCATGCTAATGCATAGCTCAGACCCCAACGCTCCCAAGCGTGGT
CTCTCTGCCTACATGTTCTTCGCCAACGACAACCGTGAGAAGGTTCGCGA
GGAGAACCCTGGCATCTCTTTCGGTAAGTCACTTCTGGACCTTGAATGGG
AATGTAGGCGTCTAACTTCATGCAGGCCAAGTCGGCAAGATGCTCGGAGA
GCGGTGGAAGGCTCTGAGCGACACTGACCGTCGCCCTTACGAGGAGAAGG
CTGCCGCTGATAAGAAGCGTTACGAAGACGAGAAGGCCAGCTACAACGTA
AGTTGACACTCCTGCCGTTTCTTTGTCAGCCAATGCTAATGAACTTTGAA
CAGGCGGCTGCTGAGGAGGACGAGGAATCATCCTAAGGGTTTCCCTCTCT
TCATGGGTCTTGTGTGTCTGGCCGATTGGCGTTTTTCGTGTCGTTTATTC
CGCTGATTGTCTGCCTTGTAATTGATGCTTCTTATATTTTCTCTTTATCT
ACTCAACGGCTTCTGGTATGGGATGATGGCGGTAACTCTTGATTTTCTGT
TATGAAGGATTCTCGATGG
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Coding sequence (CDS) from alignment at KZ851916.1:514082..515050-

>M747DRAFT_46636-T1 ID=M747DRAFT_46636-T1|Name=M747DRAFT_46636-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=492bp|location=Sequence derived from alignment at KZ851916.1:514082..515050- (Aspergillus niger ATCC 13496)
GCCAAGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACACT
GACCGTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACGA
AGACGAGAAGGCCAGCTACAACGTAAGTTGAATGCTAATGCATAGCTCAG
ACCCCAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAAC
GACAACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCGGCCA
AGTCGGCAAGATGCTCGGAGAGCGGTGGAAGGCTCTGAGCGACACTGACC
GTCGCCCTTACGAGGAGAAGGCTGCCGCTGATAAGAAGCGTTACGAAGAC
GAGAAGGCCAGCTACAACGTAAGTTGAATGCTAATGCATAGCTCAGACCC
CAACGCTCCCAAGCGTGGTCTCTCTGCCTACATGTTCTTCGCCAACGACA
ACCGTGAGAAGGTTCGCGAGGAGAACCCTGGCATCTCTTTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NHP1M747DRAFT_46636Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_46636-T1M747DRAFT_46636-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_46636-T1.cdsM747DRAFT_46636-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_46636-T1.utr3p2M747DRAFT_46636-T1.utr3p2Aspergillus niger ATCC 13496three_prime_UTR
M747DRAFT_46636-T1.utr3p1M747DRAFT_46636-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_46636-T1.exon4M747DRAFT_46636-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_46636-T1.exon3M747DRAFT_46636-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_46636-T1.exon2M747DRAFT_46636-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_46636-T1.exon1M747DRAFT_46636-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_46636-T1.utr5p2M747DRAFT_46636-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_46636-T1.utr5p1M747DRAFT_46636-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036910
DBxrefInterPro:IPR009071
DBxrefPFAM:PF09011
DBxrefPFAM:PF00505
ProductHigh mobility group nhp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:514082..515050 -
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