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M747DRAFT_47754-T1, M747DRAFT_47754-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_47754-T1
Unique NameM747DRAFT_47754-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:681732..683036-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_47754-T1 ID=M747DRAFT_47754-T1|Name=M747DRAFT_47754-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1305bp|location=Sequence derived from alignment at KZ851916.1:681732..683036- (Aspergillus niger ATCC 13496)
TCTCATTCCTCTCTCCATCACATTTCTCCACGTCTAATCCTTCTCGTTCA
CTAAACCACTCTTTCCACCCCCCTCTCTCCATATTACTCAATAAAGCAAT
TCCCTCCACTACCGCCCCTCCATCGCGATGTCGGTCGTTTCTCTTCTTGG
CGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTG
AGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGTACACTGTGAACC
CCGCTCCCGTTAATTGGCCGCCACTAACGAGTTTCCAGATCTGGAGTGGA
AGCTCACCTACGTCGGTTCGGCGACATCGTAAGTTGGACCTGAAGCGAGA
TAAAATCAGATCTATCTGCTAACCACCTGTTTCTCTAGCTCCGAGTATGA
CCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACA
AGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCC
GAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAG
AGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGG
AGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGG
AATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGGTA
GGTATCATCTATTTGTTTTTCTTGTCATACGATACTAATAACTACCGCCT
AGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGA
AGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAG
AGCTCGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACC
GAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGA
GGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTG
ACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAG
GACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGG
CGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGG
TGCACTAAAGCAAATGAAGAGCCCCGAAGTTATACTACCTTTCTTTATCT
TCTATTCCGTCGAATGATTTTACGACTGGGTTGCAACGTGTTTCATGACA
ACATTCTCATCTATCATATCCCCCGCCACCTTCACATCTTTGCAAGTACT
TAGCT
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Coding sequence (CDS) from alignment at KZ851916.1:681732..683036-

>M747DRAFT_47754-T1 ID=M747DRAFT_47754-T1|Name=M747DRAFT_47754-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3456bp|location=Sequence derived from alignment at KZ851916.1:681732..683036- (Aspergillus niger ATCC 13496)
GGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAG
CCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAG
CTCGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGA
AGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGG
AGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGAC
GAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGA
CGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCG
CCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTG
CACTAACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGA
TCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTC
AAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCAC
TTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACA
ACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATC
ATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCG
GTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCG
ACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCT
GCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGA
ACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCC
AGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTG
CAGAGGAAGCAGAGCTCGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTG
GAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCAC
CAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCG
AAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGAC
GACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGA
ATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGC
CCGAGTTGATGGTGCACTAACTCCGAGTATGACCAGGAACTCGACTCCCT
GCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCG
ACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACC
GTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGG
TTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGC
CGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAG
CCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCT
ACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAA
TCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACT
TTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCC
GCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAG
TGCCGCCTACGGTGCAGAGGAAGCAGAGCTCGAAGCAGCCCTCTTCAAGG
AGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACC
GAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGA
GTCTGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACG
AGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCC
GAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGC
CCATCAACAACAGCCCGAGTTGATGGTGCACTAACTCCGAGTATGACCAG
GAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTT
CATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAA
TCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAA
TTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCT
TATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATA
TCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGA
GTGGAAGCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCT
TCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATC
AATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGG
AGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAG
GAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTCGAAGC
AGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGG
AGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGAT
ATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGACGAAGATGA
GGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAA
TGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAAC
AACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAACT
CCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTT
GGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCAT
CCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCT
ATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATAC
GATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACG
CATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCA
TCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCATG
TCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTT
CCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGC
AGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0006337nucleosome disassembly
GO:0006334nucleosome assembly
GO:0016573histone acetylation
GO:0006333chromatin assembly or disassembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1M747DRAFT_47754Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_47754-T1M747DRAFT_47754-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_47754-T1.cdsM747DRAFT_47754-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_47754-T1.utr3p1M747DRAFT_47754-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_47754-T1.exon4M747DRAFT_47754-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_47754-T1.exon3M747DRAFT_47754-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_47754-T1.exon2M747DRAFT_47754-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_47754-T1.exon1M747DRAFT_47754-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_47754-T1.utr5p1M747DRAFT_47754-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264COX
DBxrefInterPro:IPR006818
DBxrefInterPro:IPR017282
DBxrefInterPro:IPR036747
DBxrefPFAM:PF04729
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:681732..683036 -
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