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M747DRAFT_52104-T1, M747DRAFT_52104-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_52104-T1
Unique NameM747DRAFT_52104-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:428171..429769+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_52104-T1 ID=M747DRAFT_52104-T1|Name=M747DRAFT_52104-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1599bp|location=Sequence derived from alignment at KZ851900.1:428171..429769+ (Aspergillus niger ATCC 13496)
CCTCGCTGCTCCATCTCTCACCACCACAACCATCCCTCCACTCGATAGGT
AGCGCCTCTGCGCTACTAACCACACCCACCATGGACTACGAGATGGATAT
CGAGCCCACCGGGCCCCAAGTCACCGTTCGCGAAGTGAGTTGACCTCTGA
CCAATCTACCAATTACACCATCTATACCAACACCAGCCCATGCAACACAA
TCACCCCATCGAACCTTTCCAACCATCCTTACTAACACTTAGAATCTTAA
TAGGCCGAACCCACTCGCGTTGACTTTAAACTCACCTCGGTCGACCTCGC
TTTCGCCAACTCCCTCCGCCGAGTAATGCTCTCCGAAATCCCCACGATGG
CCATCGACCTCGTCGAAGTGGAAAAGAACACCTCCGTACTGCCCGACGAA
TTCCTCGCTCACCGTCTCGGCCTTATCCCCCTGATCAGCAAAAACTGCGA
CCAAGACGTCGAGTACACGCGCGACTGCGAATGCGAGGACCACTGCGCGC
GCTGCTCCGTGACCCTGTCGCTCCATGCGCGGTGCACAGGCGACGATATC
ATGCGGGTGTATGCGCGCGATCTCGTGGTATCAGGAGAACGGGCGAACGA
GTGGGTGGGAAACCCGGTGATCTTGGATCCGGAGGGAAACGGGCCCTTGA
TTTGTAAATTGAGACGCGGCCAGGAGTTGAAGATGACGTGTATTGCGAAG
AAGGGTATTGCGAAGGAACATGCGAAGTGGATGCCCACGTCGGCGATTGG
GTTTGAATATGATCCGCATAATAATTTGAGACATGTGGATTACTGGTATG
AGGAGGATCCGGCGAAGGAATGGTATGTTTTATCCCAAACCCTCATTTTC
ATTTTACTTCTATTCCAGCACCTTTCTGCATCGCATACTACAGAGCAAGG
GAATTCTACATGAGCGAGCAAAGATCAATGAGCTAATAGTACAACCAATA
CAGGCCCGTCTCAGCCAACGCAGGATGGGAACAGCCTGCTCCCCCAGACC
AACCATTCGACTACGACGCCCAGCCCAACAGCTTCTACATCGACGTCGAG
AGCATCGGCACCCTTGAACCGGACATGATCATCCAGCAAGGAATCACAGT
GTTGCAACGGAAGCTCGCCTCCGTGATATCCTCGTTATCAGGCACCGAAG
GCGCAGACCGCAACGGCGTCATGGGCGGTGACGACGAAGATATGATGGGT
GTGCGCAGCCCGGATGCCTACGAACCGCCCGAGGGTATGGACGGTGGCTT
TACGGCGTATGCGAATGGTGGAGGCGCTAGCGCATGGGGTCCTAGTGCTA
CGACGCCATATGGAGTCACGCCATATGGGGGTGGATATGGATTCTAAGGT
GGAATCAGTTCGTCGCACCTTCCCTTCTCATCTGACAAGGAAAGAAGCGG
GGCATGCTCTTACCTTTTTTCATCCATCCCATAACTCACCATGAAAGAAA
AAAAACGGAAAAGACCAAAAACAAACCCTGTCCAGTCACATGCTCATGCT
CATACTCACCTTACCAGTGACGGATGGTCATGACCATGAATGGCAGACAG
TGGCACCCACAACCCATCACGCAGCCTCGCATGAAGCCACCAAAAAACC
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Coding sequence (CDS) from alignment at KZ851900.1:428171..429769+

>M747DRAFT_52104-T1 ID=M747DRAFT_52104-T1|Name=M747DRAFT_52104-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3051bp|location=Sequence derived from alignment at KZ851900.1:428171..429769+ (Aspergillus niger ATCC 13496)
ATGGACTACGAGATGGATATCGAGCCCACCGGGCCCCAAGTCACCGTTCG
CGAAGCCGAACCCACTCGCGTTGACTTTAAACTCACCTCGGTCGACCTCG
CTTTCGCCAACTCCCTCCGCCGAGTAATGCTCTCCGAAATCCCCACGATG
GCCATCGACCTCGTCGAAGTGGAAAAGAACACCTCCGTACTGCCCGACGA
ATTCCTCGCTCACCGTCTCGGCCTTATCCCCCTGATCAGCAAAAACTGCG
ACCAAGACGTCGAGTACACGCGCGACTGCGAATGCGAGGACCACTGCGCG
CGCTGCTCCGTGACCCTGTCGCTCCATGCGCGGTGCACAGGCGACGATAT
CATGCGGGTGTATGCGCGCGATCTCGTGGTATCAGGAGAACGGGCGAACG
AGTGGGTGGGAAACCCGGTGATCTTGGATCCGGAGGGAAACGGGCCCTTG
ATTTGTAAATTGAGACGCGGCCAGGAGTTGAAGATGACGTGTATTGCGAA
GAAGGGTATTGCGAAGGAACATGCGAAGTGGATGCCCACGTCGGCGATTG
GGTTTGAATATGATCCGCATAATAATTTGAGACATGTGGATTACTGGTAT
GAGGAGGATCCGGCGAAGGAATGGCCCGTCTCAGCCAACGCAGGATGGGA
ACAGCCTGCTCCCCCAGACCAACCATTCGACTACGACGCCCAGCCCAACA
GCTTCTACATCGACGTCGAGAGCATCGGCACCCTTGAACCGGACATGATC
ATCCAGCAAGGAATCACAGTGTTGCAACGGAAGCTCGCCTCCGTGATATC
CTCGTTATCAGGCACCGAAGGCGCAGACCGCAACGGCGTCATGGGCGGTG
ACGACGAAGATATGATGGGTGTGCGCAGCCCGGATGCCTACGAACCGCCC
GAGGGTATGGACGGTGGCTTTACGGCGTATGCGAATGGTGGAGGCGCTAG
CGCATGGGGTCCTAGTGCTACGACGCCATATGGAGTCACGCCATATGGGG
GTGGATATGGATTCTAAATGGACTACGAGATGGATATCGAGCCCACCGGG
CCCCAAGTCACCGTTCGCGAAGCCGAACCCACTCGCGTTGACTTTAAACT
CACCTCGGTCGACCTCGCTTTCGCCAACTCCCTCCGCCGAGTAATGCTCT
CCGAAATCCCCACGATGGCCATCGACCTCGTCGAAGTGGAAAAGAACACC
TCCGTACTGCCCGACGAATTCCTCGCTCACCGTCTCGGCCTTATCCCCCT
GATCAGCAAAAACTGCGACCAAGACGTCGAGTACACGCGCGACTGCGAAT
GCGAGGACCACTGCGCGCGCTGCTCCGTGACCCTGTCGCTCCATGCGCGG
TGCACAGGCGACGATATCATGCGGGTGTATGCGCGCGATCTCGTGGTATC
AGGAGAACGGGCGAACGAGTGGGTGGGAAACCCGGTGATCTTGGATCCGG
AGGGAAACGGGCCCTTGATTTGTAAATTGAGACGCGGCCAGGAGTTGAAG
ATGACGTGTATTGCGAAGAAGGGTATTGCGAAGGAACATGCGAAGTGGAT
GCCCACGTCGGCGATTGGGTTTGAATATGATCCGCATAATAATTTGAGAC
ATGTGGATTACTGGTATGAGGAGGATCCGGCGAAGGAATGGCCCGTCTCA
GCCAACGCAGGATGGGAACAGCCTGCTCCCCCAGACCAACCATTCGACTA
CGACGCCCAGCCCAACAGCTTCTACATCGACGTCGAGAGCATCGGCACCC
TTGAACCGGACATGATCATCCAGCAAGGAATCACAGTGTTGCAACGGAAG
CTCGCCTCCGTGATATCCTCGTTATCAGGCACCGAAGGCGCAGACCGCAA
CGGCGTCATGGGCGGTGACGACGAAGATATGATGGGTGTGCGCAGCCCGG
ATGCCTACGAACCGCCCGAGGGTATGGACGGTGGCTTTACGGCGTATGCG
AATGGTGGAGGCGCTAGCGCATGGGGTCCTAGTGCTACGACGCCATATGG
AGTCACGCCATATGGGGGTGGATATGGATTCTAAATGGACTACGAGATGG
ATATCGAGCCCACCGGGCCCCAAGTCACCGTTCGCGAAGCCGAACCCACT
CGCGTTGACTTTAAACTCACCTCGGTCGACCTCGCTTTCGCCAACTCCCT
CCGCCGAGTAATGCTCTCCGAAATCCCCACGATGGCCATCGACCTCGTCG
AAGTGGAAAAGAACACCTCCGTACTGCCCGACGAATTCCTCGCTCACCGT
CTCGGCCTTATCCCCCTGATCAGCAAAAACTGCGACCAAGACGTCGAGTA
CACGCGCGACTGCGAATGCGAGGACCACTGCGCGCGCTGCTCCGTGACCC
TGTCGCTCCATGCGCGGTGCACAGGCGACGATATCATGCGGGTGTATGCG
CGCGATCTCGTGGTATCAGGAGAACGGGCGAACGAGTGGGTGGGAAACCC
GGTGATCTTGGATCCGGAGGGAAACGGGCCCTTGATTTGTAAATTGAGAC
GCGGCCAGGAGTTGAAGATGACGTGTATTGCGAAGAAGGGTATTGCGAAG
GAACATGCGAAGTGGATGCCCACGTCGGCGATTGGGTTTGAATATGATCC
GCATAATAATTTGAGACATGTGGATTACTGGTATGAGGAGGATCCGGCGA
AGGAATGGCCCGTCTCAGCCAACGCAGGATGGGAACAGCCTGCTCCCCCA
GACCAACCATTCGACTACGACGCCCAGCCCAACAGCTTCTACATCGACGT
CGAGAGCATCGGCACCCTTGAACCGGACATGATCATCCAGCAAGGAATCA
CAGTGTTGCAACGGAAGCTCGCCTCCGTGATATCCTCGTTATCAGGCACC
GAAGGCGCAGACCGCAACGGCGTCATGGGCGGTGACGACGAAGATATGAT
GGGTGTGCGCAGCCCGGATGCCTACGAACCGCCCGAGGGTATGGACGGTG
GCTTTACGGCGTATGCGAATGGTGGAGGCGCTAGCGCATGGGGTCCTAGT
GCTACGACGCCATATGGAGTCACGCCATATGGGGGTGGATATGGATTCTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_52104M747DRAFT_52104Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_52104-T1M747DRAFT_52104-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_52104-T1.utr5p1M747DRAFT_52104-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_52104-T1.exon1M747DRAFT_52104-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_52104-T1.exon2M747DRAFT_52104-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_52104-T1.exon3M747DRAFT_52104-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_52104-T1.cdsM747DRAFT_52104-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_52104-T1.utr3p1M747DRAFT_52104-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263PXH
DBxrefInterPro:IPR001514
DBxrefInterPro:IPR011262
DBxrefInterPro:IPR036603
DBxrefInterPro:IPR036643
DBxrefInterPro:IPR011263
DBxrefPFAM:PF01193
DBxrefPFAM:PF01000
Productinsert subdomain of RNA polymerase alpha subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:428171..429769 +
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