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M747DRAFT_5288-T1, M747DRAFT_5288-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_5288-T1
Unique NameM747DRAFT_5288-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:1089761..1091330-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_5288-T1 ID=M747DRAFT_5288-T1|Name=M747DRAFT_5288-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1570bp|location=Sequence derived from alignment at KZ851899.1:1089761..1091330- (Aspergillus niger ATCC 13496)
TCATTCCCCGCATCCAATACGAAGATGAGGCTATTTAACTGAGCCTGACA
CAGAAATGTGTATAGCGACCCATCCGTACAACTTTTATCAGCAACTTTAT
CAGCTATCATGGCTCCTACATTCCGTGCAGAACAAATCGGCTCGCTGATG
CGGCCCGAGGAGCTATTAGCTGCTCGCAATGCCGCCGGATTGGCGCACAT
CTACACTCGAACCAACGTGCCGGAGGGTGTGCAGCAAGTGACAAAACAGG
CGATTGCCAAGGTGGTGGAGCAGCAGCAGGCGCACAAGGTGCGCCCAATC
ATGACCGGAGAGTTTGAACGGCCGATCTTCTACGCTGGGTTCTTCGAGAA
TCTGGAGGGGCTTGAAATGACCAAGGTCCCCATTCCGGACGGTTACCGCA
CGGGGCTCCCGACCGTGCAGACGCTCGAGAAGCTGGGCGTCAAGGAACGG
GATGCCTGCATCGCTGTGGGCAAGATTCAGCACGTGCGCAGCCCGTACCT
GGCCGACTGGGAGTACCTACGGAGCCTGGTGCCGCAGGAACAGTGGAAGG
AGTGCAAGATGAGCATGCCATCTATTACCTGGCAGCACCAGCATTTGCGT
GCAGGGACCGCGTTCACGGCCTCCAGCCCGTACACTACCGACAAAGAGTA
CTTTGCGGACCTTGCAAAGGCGTTTGCACGGGAGTACCAGATCCTTTACG
ATGCGGGACTACGCTCTATCCAGGTGGACGATCCCGCCATGACCTTCTTT
GTGACGGACGAAATGCGATCGGGGTGTGTGGCAGATGGGATTGACCCGGA
CGAACTATTGGACCTGTATATCTGGGCGCACAACGAAAGTCTCCGGGACC
GACCTGCAGATCTTCATGTCGGAGTTCACCTCTGCCGGGGCAATATGCCC
GGGTCGACGCACGTGCTTAGTGGGTCGTATGAGCGGATTGCGCAACGCAT
GTTCACGGGACTCAACTATGACACGTTCTACCTGGAATACGACACGGAAC
GAGCGGGCGACTTCCAGCCGCTGCGACACCTGCCAGTGGGCAAGAACGTG
GTGCTGGGAGTGGTATCGACGAAAGCCCCGGAATTGGAGACGGTGGAGGA
GCTGCAGGCGCGGGTGTATGAAGCGGCGGATGTGATTGCGCAGGGGCAAG
GCCGAAGTCGGCAAGAGGTGCTCGATAGCTCGCTTGGGGTGAGTCCGCAG
TGTGGTTTCTCAAGTGTGAGCTATGGTCGGGGGATTGGAATGACGGAGAC
GCGCATGTGGGAGAAGCTACAGTTGGTGCAAAAAGTAGCCGAGCGGGTGT
GGCAGTAAGCTGCAGTAAGCTGCAGGGGGGATGGCCAGGGATGGTATGTG
TGTATACATTCGTCACTACTATATTCAAGCGTACCGGATATACTATGTAG
TGTTGAAGGAATGCATGGCTGTCAGGCACAGCAGATTGCATGATCCACCA
CTGCTGTCAAGTAGCACGGCATGTTGGCCTGCACGTGGCTGAATTGTTGG
GTTCCGGACATCCGCGATGATCCTTAACCAATTTATTCTGTGCATAAATG
CGGGTAGATGAACACCCGCA
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Coding sequence (CDS) from alignment at KZ851899.1:1089761..1091330-

>M747DRAFT_5288-T1 ID=M747DRAFT_5288-T1|Name=M747DRAFT_5288-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1200bp|location=Sequence derived from alignment at KZ851899.1:1089761..1091330- (Aspergillus niger ATCC 13496)
ATGGCTCCTACATTCCGTGCAGAACAAATCGGCTCGCTGATGCGGCCCGA
GGAGCTATTAGCTGCTCGCAATGCCGCCGGATTGGCGCACATCTACACTC
GAACCAACGTGCCGGAGGGTGTGCAGCAAGTGACAAAACAGGCGATTGCC
AAGGTGGTGGAGCAGCAGCAGGCGCACAAGGTGCGCCCAATCATGACCGG
AGAGTTTGAACGGCCGATCTTCTACGCTGGGTTCTTCGAGAATCTGGAGG
GGCTTGAAATGACCAAGGTCCCCATTCCGGACGGTTACCGCACGGGGCTC
CCGACCGTGCAGACGCTCGAGAAGCTGGGCGTCAAGGAACGGGATGCCTG
CATCGCTGTGGGCAAGATTCAGCACGTGCGCAGCCCGTACCTGGCCGACT
GGGAGTACCTACGGAGCCTGGTGCCGCAGGAACAGTGGAAGGAGTGCAAG
ATGAGCATGCCATCTATTACCTGGCAGCACCAGCATTTGCGTGCAGGGAC
CGCGTTCACGGCCTCCAGCCCGTACACTACCGACAAAGAGTACTTTGCGG
ACCTTGCAAAGGCGTTTGCACGGGAGTACCAGATCCTTTACGATGCGGGA
CTACGCTCTATCCAGGTGGACGATCCCGCCATGACCTTCTTTGTGACGGA
CGAAATGCGATCGGGGTGTGTGGCAGATGGGATTGACCCGGACGAACTAT
TGGACCTGTATATCTGGGCGCACAACGAAAGTCTCCGGGACCGACCTGCA
GATCTTCATGTCGGAGTTCACCTCTGCCGGGGCAATATGCCCGGGTCGAC
GCACGTGCTTAGTGGGTCGTATGAGCGGATTGCGCAACGCATGTTCACGG
GACTCAACTATGACACGTTCTACCTGGAATACGACACGGAACGAGCGGGC
GACTTCCAGCCGCTGCGACACCTGCCAGTGGGCAAGAACGTGGTGCTGGG
AGTGGTATCGACGAAAGCCCCGGAATTGGAGACGGTGGAGGAGCTGCAGG
CGCGGGTGTATGAAGCGGCGGATGTGATTGCGCAGGGGCAAGGCCGAAGT
CGGCAAGAGGTGCTCGATAGCTCGCTTGGGGTGAGTCCGCAGTGTGGTTT
CTCAAGTGTGAGCTATGGTCGGGGGATTGGAATGACGGAGACGCGCATGT
GGGAGAAGCTACAGTTGGTGCAAAAAGTAGCCGAGCGGGTGTGGCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038715-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0009086methionine biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_5288M747DRAFT_5288Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5288-T1.cdsM747DRAFT_5288-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5288-T1.utr3p1M747DRAFT_5288-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5288-T1.exon1M747DRAFT_5288-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5288-T1.utr5p1M747DRAFT_5288-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_5288-T1M747DRAFT_5288-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR038071
DBxrefInterPro:IPR002629
DBxrefPFAM:PF01717
Product vitamin-B12 independent
Productmethionine synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:1089761..1091330 -
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