You are here

Home

M747DRAFT_56573-T1, M747DRAFT_56573-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_56573-T1
Unique NameM747DRAFT_56573-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:1315545..1317321+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_56573-T1 ID=M747DRAFT_56573-T1|Name=M747DRAFT_56573-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1777bp|location=Sequence derived from alignment at KZ851900.1:1315545..1317321+ (Aspergillus niger ATCC 13496)
CCATCCTCCTCCTTGTTGATCATCCTCGCGAATCTTTTTTTCTCTCTCCC
ACCCCCTTCCATTCTTCTGCTCCTCCCCACCTTCTATCATTCCAGTTCAC
CCGCGCAATTCCCTTCTTGACCTTTCGCGGGGAAATCCTGTGTTTTGCTT
CCTGCATTTTCCCAGGGATATCTTTGCGCCGTGATCTCGTGCCCCCAACG
TCGACCACGTCTTTAAATTATCTTTCTTGTCTCACTTCTTTTTTTAAATT
CAAATCCACGCGATAAACCAACTATCCTCCATGACGATGGTCATTGAGAA
CCAGAACCGCCAATACGGCGGGATGGGCTTCGATAACGTGTATCAACACA
ACATGCACCACAGCGCTCCGCAGTTCACCGACCCATGGACCGCTCAAACT
TCGTCCCATTCCACTCCCCCGGTCTACGCGACTTCCATGGGACCCAGCCA
GATTGGCCTCAGCCATGTTAAGCAGGAGGAAGTGAGCCGCCCACCGATGT
CTATGCCATACTCGAGTATTCCCGTTTCCGCTCCCTCGATGGTCGCCGGG
AGCAACTATCCTACTGCTACTGCTTCGAGTTACCCCGGTCCGGAGATGAT
GGGTTTGTCGCACGACATGCCGCGCACTTCTTTCGATCAAGCTCCGGCCT
ATACCACCGCCTCGCCCATGACCAGCTTCGCGCCTGCGAGCTACGCCCCG
CTTAGCTACGCTCCGTCTATGCACCACCACCAGGACCGTCGGATATCTCA
TGCGTAAGTTTACCTCATCATCTGAAGCTTTCTGCGGTGTGTATATGGAG
GGAAATATGCTTACATTCATTTTTTCATCTTGTGTAGTGATGCTCGTGTC
GGTCAATCGCAACCCCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGC
CAGCCGCGGAATGGTCGCGCTCAGCCAGGATATGACACCTCGCAATATCT
ACGGCCCTCGCAGCTCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCG
ACACACTCTTCTGGATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTA
TTCCGCCTCTGTCGCATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTA
CTACCTCGGAATCTTACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGC
CCGTCGAACCTGTTGACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGAT
GAGCCAGTTTAGCTCCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGT
GCAAGGTGTGCGACAAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCAT
ATGTACAGTCACACTGGTGAAAAACGTAAGTTCCAGAACAAGTCTCTTTT
AGTAGTGGTCTGTGATACTAATAGTCGGGAATCTAGCATTCGCATGTGAC
GTGGAAGGCTGTGGCCGTCATTTCTCGGTCGTCTCTAACCTGCGGCGGCA
CAAGAAGGTCCACAAAGGAGAAAAGGAAGGTGCTTCGGGCGAAGACGAAG
AGTAAATCAAGCCACTCTTCATTTCAGTCTCGAATGCCTCCCCCTTAACG
CCACCTTAACGGGGCGGAGGAACAGCGGACTACGATCCTGAGACGCATCG
CAACACATTGTGCGACGTCTCACTCCTGAATCGGGTTCGGTATTTTGTAC
AACAGCTTCGATTCCTCTTCTACTACTTTTCTTCCTCTTTCCGTCTCGGC
CAGTGTGGCAGAGAAACGATACCCCATTTCCTTTGTTTCCTTTGTTTTCT
TTTTTCACAGATTCCCCTGGACAGGCA
back to top

Coding sequence (CDS) from alignment at KZ851900.1:1315545..1317321+

>M747DRAFT_56573-T1 ID=M747DRAFT_56573-T1|Name=M747DRAFT_56573-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3240bp|location=Sequence derived from alignment at KZ851900.1:1315545..1317321+ (Aspergillus niger ATCC 13496)
ATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTT
CGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAGTTCACCG
ACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCG
ACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGA
AGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCG
CTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGT
TACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGCGCACTTC
TTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCG
CGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCAC
CAGGACCGTCGGATATCTCATGCTGATGCTCGTGTCGGTCAATCGCAACC
CCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCGGAATGG
TCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCTCGCAGC
TCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTCTTCTGG
ATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCTCTGTCG
CATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCGGAATCT
TACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTT
GACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGTTTAGCT
CCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTGTGCGAC
AAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAGTCACAC
TGGTGAAAAACCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCT
CGGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAG
GAAGGTGCTTCGGGCGAAGACGAAGAGTAAATGACGATGGTCATTGAGAA
CCAGAACCGCCAATACGGCGGGATGGGCTTCGATAACGTGTATCAACACA
ACATGCACCACAGCGCTCCGCAGTTCACCGACCCATGGACCGCTCAAACT
TCGTCCCATTCCACTCCCCCGGTCTACGCGACTTCCATGGGACCCAGCCA
GATTGGCCTCAGCCATGTTAAGCAGGAGGAAGTGAGCCGCCCACCGATGT
CTATGCCATACTCGAGTATTCCCGTTTCCGCTCCCTCGATGGTCGCCGGG
AGCAACTATCCTACTGCTACTGCTTCGAGTTACCCCGGTCCGGAGATGAT
GGGTTTGTCGCACGACATGCCGCGCACTTCTTTCGATCAAGCTCCGGCCT
ATACCACCGCCTCGCCCATGACCAGCTTCGCGCCTGCGAGCTACGCCCCG
CTTAGCTACGCTCCGTCTATGCACCACCACCAGGACCGTCGGATATCTCA
TGCTGATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACATTCG
GAGATGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGATATG
ACACCTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTGACTC
CTACGGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCCGGCG
GAAACTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTCTGTG
ACTGACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACCTGTC
GCGGACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCTCCGG
GACCCCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAACACC
CAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCCCGTC
GTCTCTTCAGACCCATATGTACAGTCACACTGGTGAAAAACCATTCGCAT
GTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTCGTCTCTAACCTGCGG
CGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGGTGCTTCGGGCGAAGA
CGAAGAGTAAATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCG
GGATGGGCTTCGATAACGTGTATCAACACAACATGCACCACAGCGCTCCG
CAGTTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCC
GGTCTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTA
AGCAGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATT
CCCGTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTAC
TGCTTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGC
CGCGCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATG
ACCAGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTAT
GCACCACCACCAGGACCGTCGGATATCTCATGCTGATGCTCGTGTCGGTC
AATCGCAACCCCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGC
CGCGGAATGGTCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGG
CCCTCGCAGCTCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACAC
ACTCTTCTGGATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCC
GCCTCTGTCGCATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTAC
CTCGGAATCTTACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGT
CGAACCTGTTGACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGC
CAGTTTAGCTCCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAA
GGTGTGCGACAAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGT
ACAGTCACACTGGTGAAAAACCATTCGCATGTGACGTGGAAGGCTGTGGC
CGTCATTTCTCGGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAA
AGGAGAAAAGGAAGGTGCTTCGGGCGAAGACGAAGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_56573M747DRAFT_56573Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_56573-T1M747DRAFT_56573-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_56573-T1.utr5p1M747DRAFT_56573-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_56573-T1.exon1M747DRAFT_56573-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_56573-T1.exon2M747DRAFT_56573-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_56573-T1.exon3M747DRAFT_56573-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_56573-T1.cdsM747DRAFT_56573-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_56573-T1.utr3p1M747DRAFT_56573-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:1315545..1317321 +
Powered by Drupal