You are here

Home

M747DRAFT_59085-T1, M747DRAFT_59085-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_59085-T1
Unique NameM747DRAFT_59085-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851918.1:102834..105730+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_59085-T1 ID=M747DRAFT_59085-T1|Name=M747DRAFT_59085-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2897bp|location=Sequence derived from alignment at KZ851918.1:102834..105730+ (Aspergillus niger ATCC 13496)
TTGTGGGTCTCTGACCTGCAGCGACTTTGGCCTGGTCTGCGTCTTCTTTT
CCTCCCACCTCGTACATATTGATCGGCAAGCAGCCGTCTTGATTCGGCAG
CCCCTTCGTTCTTCGAACCTCCCATCCGTTCTTCTCCTACCGATACAGTT
TTTCTCCCTGCAAATCCCAGTGTCCCAGTCGGTGCGGGTGAAACCGCAGG
ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCAC
CTCCCACATTCCATGGCTAAAGAACCTGCGCATGAATTTTGTGCTCATCC
ACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT
CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGC
CGCCACCCAGAGCGGTCTCAACACCGTCGACCTCAATACCTTGCATACCT
ACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC
ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATT
TCAGCATGTCGTCAGCGATGCGCGCGCCCTTCGCCATACTCGCTCTCGCC
TCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG
GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCA
TCCGGGAAGCCGGCAGCAGGCCAAGGAGAAATCTGGCGAGGACTCACCCC
CCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG
AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGG
AAACCTTCGTGTTCCGGCTCAGCTGAGCCCAGAACATCATATTGCATTCC
TGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG
GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGA
GGAGTTAAATCGACCCGTTCGCACATCTAGCAATTCTTCGAGTTCCGAGC
GCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC
GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCC
CCATATTACGATTAACGAGCCGGATATGATCCGGACAAGGACGCGGAACT
CTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT
GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCT
ACACAATCTTTTCCGCACCCTTACGCAGGAACGTGAACGGTCAACACAGC
CGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT
CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATT
GAAGACTCTGGCAGTAGTCCTAATTTCCTACTATGCCTTCTTCCACATTC
TGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA
GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGC
TCAATCAGCTTTTAACGATGTCGGTTTCACTCTCACGCCAGACTCGCTAT
CTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT
ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGT
TCTGTCCAAAGTGACTCGTGCCGAAACCCCGCTGTGGGAGGAACTCCGCT
TTCTGCTGGATCATCCGCGTCGATGCTTCACTCTACTCTTTCCGAGGAAT
GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTT
GATATTTTTCATTATTCTGGACTTGAATGATTCGGCCGTCACATCCCTGC
CCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA
ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCA
GGTGTCCTACTTGATCATGATGTATATATCCGTCTTTCCCATCGCCATTT
CTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT
TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATAT
CGGAGCGCATTTGCGGAAGCAACTCAGTTTTGATCTATGGTACGTGTTCC
TGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA
GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGC
GTACGGCACTGTTGGTCTGTCGCTCGGGTATCCCGGAGTCAATGCCTCCT
TCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA
ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCT
GCTCCCTTCGGAATCTCTGAATCAGAACGAGATCGCAGACGCAGAACGGC
GTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG
CAATCTCAGGGTCGACCGGAGCACGGGGCTTCTACGAGTCTCGATCCAAA
GGACCGGGCAAGCCAGACATGGAACAATGGCGACATCATCCGTCGTCAGT
CGACGATACGGTCACAGCGCTCGCAGCGCTGAAAAGTATCTTGGTTATGG
TGGCATATTTTGTTTTTTCTAGACTTGGGTGGGACTTGTCTGTTTGTCTG
TTTTAATTCGTCCCTTCTTCCGTTTCGCTAGCTGGCGGGCCATGCTAGAA
GTCCTTGTGGTATCTGGCAGTTAAGGATGTTCTCTGCAGCTAGGTAC
back to top

Coding sequence (CDS) from alignment at KZ851918.1:102834..105730+

>M747DRAFT_59085-T1 ID=M747DRAFT_59085-T1|Name=M747DRAFT_59085-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2532bp|location=Sequence derived from alignment at KZ851918.1:102834..105730+ (Aspergillus niger ATCC 13496)
ATGTTTTCCGCCGTGCTGCGGCGGGCGACCTCGGTCACTTCACGCTTCAC
CTCCCACATTCCATGGCTAAAGAACCTGCGCATGAATTTTGTGCTCATCC
ACTATGTCTACATTATCGCCACCTCTTTGCTTTCTTCAATCATCATCTAT
CCAGGGGCTAATCTAGACTACACCGATGCCCTCTTCCTATCTGCCGGCGC
CGCCACCCAGAGCGGTCTCAACACCGTCGACCTCAATACCTTGCATACCT
ACCAGCAGATCGTTTTGTACGTGGTCTCCATGCTGACTACTCCCATCTTC
ATCCACACTGTGCTGGTCTTCGTGCGTCTTTACTGGTTTGAAAAGCGATT
TCAGCATGTCGTCAGCGATGCGCGCGCCCTTCGCCATACTCGCTCTCGCC
TCCGTACCATAAGCGAAGATAAGGATGGACAATCCTCTTCCCGGGAAGAG
GCTGGTGTCGCCGGTCGGTCTATCGTCGTCCTGCGCGACACACTAGGTCA
TCCGGGAAGCCGGCAGCAGGCCAAGGAGAAATCTGGCGAGGACTCACCCC
CCGCCTCTCCCACCGCGCGGGATCCACCCGAAAATTTGGGCGAAGATGCG
AGCAATGCCCTTAACCAAAAGTTAGGGATAGGACTAGGGAACAGTCTAGG
AAACCTTCGTGTTCCGGCTCAGCTGAGCCCAGAACATCATATTGCATTCC
TGGAGAATCAACGGAGAAACAAAGGCGCTCTGCGAATCCCTAGCCCTCGG
GAGTATGACAACGGTGGCGCACCACAAGTATTGGAGGAAGAAGAGGAGGA
GGAGTTAAATCGACCCGTTCGCACATCTAGCAATTCTTCGAGTTCCGAGC
GCAGCCCATGCGATATCAGCAAAGAGGATGAGAATGACAAGGACGAGGAC
GACGAGGACGATGACAAAGACGAGGATAGGCCGCGCAGACTCGATGGCCC
CCATATTACGATTAACGAGCCGGATATGATCCGGACAAGGACGCGGAACT
CTACTTTCCCCCGATTAGATACACGTCCCACTTTCCGTGAAACAAAGAAT
GACACTGATGCCTCGCAACTGGGTCGCTTGACGTCGCGGCGACCAACTCT
ACACAATCTTTTCCGCACCCTTACGCAGGAACGTGAACGGTCAACACAGC
CGTATCTCAGCTGGAACGCCACGGTCGGTCGGAACTCCAACTTTGTCGAT
CTGACCGAGGAACAACGTGACGAGCTCGGCGGGATTGAGTATCGGGCATT
GAAGACTCTGGCAGTAGTCCTAATTTCCTACTATGCCTTCTTCCACATTC
TGGGCATTCTGTGCCTCGTGCCCTGGATCATGACCACACATTGGGGCAAA
GTGGTCGAGGAAATCGGACAGGGTCGCCCTTGGTGGGCCATCTTCATGGC
TCAATCAGCTTTTAACGATGTCGGTTTCACTCTCACGCCAGACTCGCTAT
CTTCATTCCAGAGAGCGATATTCCCGCTCCTGCTTATGACGTTTTTGATT
ATTATAGGGAATACGGGATTCCCTTGCATGCTGCGCCTGATCATCTGGGT
TCTGTCCAAAGTGACTCGTGCCGAAACCCCGCTGTGGGAGGAACTCCGCT
TTCTGCTGGATCATCCGCGTCGATGCTTCACTCTACTCTTTCCGAGGAAT
GCCACGTGGTGGCTCTTTGCAATTTTGGTGGCCTTGAACGGTATCGACTT
GATATTTTTCATTATTCTGGACTTGAATGATTCGGCCGTCACATCCCTGC
CCACTGGTATCCGTATCGTGGACGGTCTGTTCCAGGCAGCCTGTACTCGA
ACCGCCGGCTTAGCTGTCATCTCTGTATCAGACTTACACCCAGCTGTGCA
GGTGTCCTACTTGATCATGATGTATATATCCGTCTTTCCCATCGCCATTT
CTTTGCGACGCACCAACGTATATGAGGAGAAGAGTCTGGGTATCTACGCT
TCTACCGAGGATGATGAGTCGGATGAGAACCAGACACCGCCCAGCTATAT
CGGAGCGCATTTGCGGAAGCAACTCAGTTTTGATCTATGGTACGTGTTCC
TGGGCCTGTTCATCATCACTATTGTGGAAGGCAAGCGCCTCCAGCAGCAA
GATGAGTATTCCTTCCAAGTGTGGTCGGTGCTGTTCGAGGTCGTATCAGC
GTACGGCACTGTTGGTCTGTCGCTCGGGTATCCCGGAGTCAATGCCTCCT
TCTCCAGCCAGTTTCAGGTTCTCTCCAAGCTGGTCATCATTGCGATGCAA
ATCCGAGGCCGTCATCGCGGTCTGCCCTATGCCTTGGACCGCGCCATTCT
GCTCCCTTCGGAATCTCTGAATCAGAACGAGATCGCAGACGCAGAACGGC
GTATGCGTCGTCGCACCTCTAGCCTTAGCCAGATGTCTATGGACCGCCAG
CAATCTCAGGGTCGACCGGAGCACGGGGCTTCTACGAGTCTCGATCCAAA
GGACCGGGCAAGCCAGACATGGAACAATGGCGACATCATCCGTCGTCAGT
CGACGATACGGTCACAGCGCTCGCAGCGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0030007cellular potassium ion homeostasis
GO:0071805potassium ion transmembrane transport
GO:0006812cation transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015079potassium ion transmembrane transporter activity
GO:0008324cation transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_59085M747DRAFT_59085Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_59085-T1.utr5p1M747DRAFT_59085-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_59085-T1.exon1M747DRAFT_59085-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_59085-T1.cdsM747DRAFT_59085-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_59085-T1.utr3p1M747DRAFT_59085-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_59085-T1M747DRAFT_59085-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR004773
DBxrefInterPro:IPR015958
DBxrefInterPro:IPR003445
DBxrefPFAM:PF02386
Productpotassium transport protein TRK1/TRK2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851918.1supercontigKZ851918.1:102834..105730 +
Powered by Drupal