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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851918.1:590317..591853+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_60678-T1 ID=M747DRAFT_60678-T1|Name=M747DRAFT_60678-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1537bp|location=Sequence derived from alignment at KZ851918.1:590317..591853+ (Aspergillus niger ATCC 13496)
CTCTTTGCTTCTACAAGCCTGTCACTCTTTCCAGGCAGTCGTTCTTTGAT
CATTCTTACTAAACGTTCATTCTTTTGGGATTTTCTTTTTGTTTTCCTTT
AAATCTTCGGTACTTTGAGAGTCCAACATGCACTACAAGCTGCTTTTCGC
TGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTG
GCGCCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCTTCC
CCCGTCTATCCCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGATAA
CGAACCTCGGGTGATCATCCTGGACAGAACGTAGGTCCATCAAACCGAGA
TTCAGGGGCAGAAATTTGACTAATATGTTGATATTTCAGCTTCGACTTTA
CCGGCACCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGGAACT
GCTTCCCAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACAACTA
CCAGGCCAGCGCCCCCAAGGTATCCGTGACTTAGTATGTTGCCCTCGTTC
AATTGATGGCCAAGTCTTTTCATGCTGAGAGCCGTGTAGTGACAAGGCGG
GTATCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGC
ACCAAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAA
GAACGTCATCATCCAGTGAGTGCAGCCCCTCGGTTGAGGGATATGAATCC
ACCCTTGCTAATAACGGCCAGGAACATTGCCGTCACCGACATCAACCCCA
AGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTC
TGGATCGACCATGTGACAACTGCTCGCATTGGTCGCCAGCACATCGTCCT
GGGCACCAGCGCCGACAACCGCGTCACCATCTCCTATTCCCTCATCGATG
GTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTG
TACCTGGACGGCAGCAACGACATGGTAACCCTCAAGGGCAACTATTTCTA
CAACCTCAGTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACG
CCGTATGTCGCCTCGAGCCTCCTATACAATCTGCACATTACTGACTACTC
TAACTACAGGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGA
GATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACG
TTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCC
GATGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCA
GCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCA
TCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGT
AACATTGCCCAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAAGGTTT
TTAAAGCAGAACAATTCTGTGAAGGAGGCCGGCCAAA back to topCoding sequence (CDS) from alignment at KZ851918.1:590317..591853+ >M747DRAFT_60678-T1 ID=M747DRAFT_60678-T1|Name=M747DRAFT_60678-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5700bp|location=Sequence derived from alignment at KZ851918.1:590317..591853+ (Aspergillus niger ATCC 13496)
ATGCACTACAAGCTGCTTTTCGCTGCTGCCGCAGCATCCTTGGCCAGCGC
TGTCAGTGCCGCCGGCGTTGTTGGCGCCGCCGAGGGTTTCGCCCACGGTG
TCACTGGTGGTGGCAGCGCTTCCCCCGTCTATCCCACGACTACTGATGAG
CTGGTCTCTTACCTCGGTGATAACGAACCTCGGGTGATCATCCTGGACAG
AACCTTCGACTTTACCGGCACCGAGGGTACCGAGACTACCACCGGATGTG
CCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCGATCAACCTGCACAGC
TGGTGTGACAACTACCAGGCCAGCGCCCCCAAGGTATCCGTGACTTATGA
CAAGGCGGGTATCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTG
GTCAGGGCACCAAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGC
GGTGCCAAGAACGTCATCATCCAGAACATTGCCGTCACCGACATCAACCC
CAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGG
TCTGGATCGACCATGTGACAACTGCTCGCATTGGTCGCCAGCACATCGTC
CTGGGCACCAGCGCCGACAACCGCGTCACCATCTCCTATTCCCTCATCGA
TGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCG
TGTACCTGGACGGCAGCAACGACATGGTAACCCTCAAGGGCAACTATTTC
TACAACCTCAGTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCA
CGCCGTGAACAACCTCTTCCACAACTTTGACGGCCACGCCTTCGAGATCG
GCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAAC
ACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGATGC
CAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCA
ACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATC
AGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACAT
TGCCCAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAAATGCACTACA
AGCTGCTTTTCGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCC
GCCGGCGTTGTTGGCGCCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGG
TGGCAGCGCTTCCCCCGTCTATCCCACGACTACTGATGAGCTGGTCTCTT
ACCTCGGTGATAACGAACCTCGGGTGATCATCCTGGACAGAACCTTCGAC
TTTACCGGCACCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGG
AACTGCTTCCCAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACA
ACTACCAGGCCAGCGCCCCCAAGGTATCCGTGACTTATGACAAGGCGGGT
ATCCTCCCCATCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGCAC
CAAGGGTGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGA
ACGTCATCATCCAGAACATTGCCGTCACCGACATCAACCCCAAGTATGTC
TGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTCTGGATCGA
CCATGTGACAACTGCTCGCATTGGTCGCCAGCACATCGTCCTGGGCACCA
GCGCCGACAACCGCGTCACCATCTCCTATTCCCTCATCGATGGTCGCTCC
GACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTGTACCTGGA
CGGCAGCAACGACATGGTAACCCTCAAGGGCAACTATTTCTACAACCTCA
GTGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCGTGAAC
AACCTCTTCCACAACTTTGACGGCCACGCCTTCGAGATCGGCACTGGTGG
CTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGG
AGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGATGCCAACACCAAC
CAGCAGTGCGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGG
CAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATCAGCAAGTTCG
CTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGG
ACCATGAAGAACGCTGGCCAGGGCAAATAAATGCACTACAAGCTGCTTTT
CGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTG
TTGGCGCCGCCGAGGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCT
TCCCCCGTCTATCCCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGA
TAACGAACCTCGGGTGATCATCCTGGACAGAACCTTCGACTTTACCGGCA
CCGAGGGTACCGAGACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCC
CAATGCCAGGTGGCGATCAACCTGCACAGCTGGTGTGACAACTACCAGGC
CAGCGCCCCCAAGGTATCCGTGACTTATGACAAGGCGGGTATCCTCCCCA
TCACGGTCAACTCCAACAAGAGTATTGTTGGTCAGGGCACCAAGGGTGTC
ATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCAT
CCAGAACATTGCCGTCACCGACATCAACCCCAAGTATGTCTGGGGTGGTG
ATGCCATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACA
ACTGCTCGCATTGGTCGCCAGCACATCGTCCTGGGCACCAGCGCCGACAA
CCGCGTCACCATCTCCTATTCCCTCATCGATGGTCGCTCCGACTACTCTG
CCACCTGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAAC
GACATGGTAACCCTCAAGGGCAACTATTTCTACAACCTCAGTGGCCGCAT
GCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCGTGAACAACCTCTTCC
ACAACTTTGACGGCCACGCCTTCGAGATCGGCACTGGTGGCTACGTCCTG
GCCGAGGGTAACGTCTTCCAGGACGTTAACACTGTGGTGGAGACGCCCAT
CAGCGGCCAGCTCTTCAGCTCCCCCGATGCCAACACCAACCAGCAGTGCG
CCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGC
TCGATGTCCGGATCGGACACCAGCATCATCAGCAAGTTCGCTGGCAAGAC
CATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGA
ACGCTGGCCAGGGCAAATAAATGCACTACAAGCTGCTTTTCGCTGCTGCC
GCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTGGCGCCGC
CGAGGGTTTCGCCCACGGTGTCACTGGTGGTGGCAGCGCTTCCCCCGTCT
ATCCCACGACTACTGATGAGCTGGTCTCTTACCTCGGTGATAACGAACCT
CGGGTGATCATCCTGGACAGAACCTTCGACTTTACCGGCACCGAGGGTAC
CGAGACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGG
TGGCGATCAACCTGCACAGCTGGTGTGACAACTACCAGGCCAGCGCCCCC
AAGGTATCCGTGACTTATGACAAGGCGGGTATCCTCCCCATCACGGTCAA
CTCCAACAAGAGTATTGTTGGTCAGGGCACCAAGGGTGTCATCAAGGGCA
AGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGAACATT
GCCGTCACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCATTAC
TGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACAACTGCTCGCA
TTGGTCGCCAGCACATCGTCCTGGGCACCAGCGCCGACAACCGCGTCACC
ATCTCCTATTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTGCAA
CGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTAA
CCCTCAAGGGCAACTATTTCTACAACCTCAGTGGCCGCATGCCCAAGGTT
CAGGGTAACACTCTGCTGCACGCCGTGAACAACCTCTTCCACAACTTTGA
CGGCCACGCCTTCGAGATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTA
ACGTCTTCCAGGACGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAG
CTCTTCAGCTCCCCCGATGCCAACACCAACCAGCAGTGCGCCTCCGTCTT
CGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCG
GATCGGACACCAGCATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCG
GCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGAACGCTGGCCA
GGGCAAATAAATGCACTACAAGCTGCTTTTCGCTGCTGCCGCAGCATCCT
TGGCCAGCGCTGTCAGTGCCGCCGGCGTTGTTGGCGCCGCCGAGGGTTTC
GCCCACGGTGTCACTGGTGGTGGCAGCGCTTCCCCCGTCTATCCCACGAC
TACTGATGAGCTGGTCTCTTACCTCGGTGATAACGAACCTCGGGTGATCA
TCCTGGACAGAACCTTCGACTTTACCGGCACCGAGGGTACCGAGACTACC
ACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCGATCAA
CCTGCACAGCTGGTGTGACAACTACCAGGCCAGCGCCCCCAAGGTATCCG
TGACTTATGACAAGGCGGGTATCCTCCCCATCACGGTCAACTCCAACAAG
AGTATTGTTGGTCAGGGCACCAAGGGTGTCATCAAGGGCAAGGGTCTCCG
TGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGAACATTGCCGTCACCG
ACATCAACCCCAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGAC
TCTGATCTGGTCTGGATCGACCATGTGACAACTGCTCGCATTGGTCGCCA
GCACATCGTCCTGGGCACCAGCGCCGACAACCGCGTCACCATCTCCTATT
CCCTCATCGATGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCAC
TACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTAACCCTCAAGGG
CAACTATTTCTACAACCTCAGTGGCCGCATGCCCAAGGTTCAGGGTAACA
CTCTGCTGCACGCCGTGAACAACCTCTTCCACAACTTTGACGGCCACGCC
TTCGAGATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCA
GGACGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCT
CCCCCGATGCCAACACCAACCAGCAGTGCGCCTCCGTCTTCGGTCGTTCC
TGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACAC
CAGCATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCC
CGGGTAACATTGCCCAGTGGACCATGAAGAACGCTGGCCAGGGCAAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | pectin lyase pelB |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851918.1 | supercontig | KZ851918.1:590317..591853 + |
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