You are here

Home

M747DRAFT_67657-T1, M747DRAFT_67657-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_67657-T1
Unique NameM747DRAFT_67657-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:549821..551293+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_67657-T1 ID=M747DRAFT_67657-T1|Name=M747DRAFT_67657-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1473bp|location=Sequence derived from alignment at KZ851920.1:549821..551293+ (Aspergillus niger ATCC 13496)
GCAATATCAAGAATATCACGAAGACAATAGCCCTGTAGGAGTGTAGGAGC
GCTCCACTTCAGCCAGAACAAACAGACCCGGCCCAGCCGCGTAAAAAGAG
GCCACCCTGTCGCCAAGTCCGAGTCATCAGTTCGTATGTGTTCGCGAGGC
TGAGTCGTGCGGAACGGTCACCTGCACCCACCCCCGTCAGCCGCCAGTCA
CCCACCACCCATTCCTGCAGCACGCCCCAGCTGATCATCTTCACAGGACA
ACCATATACTATCCGAATATAACAGCCATCCCAACTGCAACCCCATACAT
GCATCCATCCATACATACATACATACATACCAACCAATATCCCTCACCAC
ACATTCATTCCCAAACCAGACCAGCGATAAACTGTCCCATCCATTAAATT
CCTCACTTCCAAAATATGTCCGACCCCTACCCCCAGCACCAGCAACCATC
CTACCCCTCTCCCGTCCCAAATAGCGAAACTCCGTACTACTCTCCCCCGG
ACGGCGTCTACCAGCACGCAGGATACGACTACGAACCGCAACAGTTCTAC
AATCAACATGCGCTGCCGAATCAAGACCCCGCTTATAGTTCTCAGTACGA
CGTGAGCCAGATCCCTCGGTCTTATCCGACACAATGGAATCCGCAGCCTG
CTAGCAGCAGCAGCACCAATATCAATAATGTCAACAATGAGTCTAATCCT
ACATCGCATTATGATCCCGACCGTCTAGGACCGGGCTATGAACCGCCTAT
TCGGAGGGGGAGTAATGCTGAGTACTAGTCTGTTTTTCTTTCCCTCAATC
TCATATGTAAATTATACAGCATACACTTATACTTATACACAAGGGAATAA
AACAGTGCCCAATCCGCCGCAGACATGCAAGCCCTTCCTCCTTCAGCCCT
GGAGACCGAACAGCAATCCCGCACCAACGGAAATGATCCCACTACCGCTG
GTGCTACTGGTGAAGAAGAAGGCGAGCGCAGTCTAGGTGGAGCTGTTCTC
GGTGGTGCGACAGGGTACTATCTGGGACATAAGAAAGACCATGGACTTTT
GGGGGCAGTTGGGGGTGCGATCTTGGGAAATTTCGTTAGTAATAAGATGA
AGAAGGACGATAGTGATGAAGAGGTGGAGGTGGATGATGATCGCGAGACG
GAGTACACTCGGTATCATAGTAGTCATTATCGACGGTCGTCGAGTCATGG
ACATGGACACCATCATCATCACCACCATCACCATCATCATCATCATGGTC
ATGGACATCGGAGTCGGAGTCGAAGTCGGCATGAGGAGTATGAGGAGTGG
TAGGGAAGTATTATGAGTTATGAGTTATGGGTTATGATTGATTGTTTCCT
TGAGCAGTGAGCCATGTTGGATATGAATCATGATGTTGATACCCTCTTTG
TCTCTGTTTATGCTTCTACTTACTGTGAGTTACGGGCTATATAGAATGTT
ATCTATTCAATTGATCCACACGG
back to top

Coding sequence (CDS) from alignment at KZ851920.1:549821..551293+

>M747DRAFT_67657-T1 ID=M747DRAFT_67657-T1|Name=M747DRAFT_67657-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1620bp|location=Sequence derived from alignment at KZ851920.1:549821..551293+ (Aspergillus niger ATCC 13496)
ATGTCCGACCCCTACCCCCAGCACCAGCAACCATCCTACCCCTCTCCCGT
CCCAAATAGCGAAACTCCGTACTACTCTCCCCCGGACGGCGTCTACCAGC
ACGCAGGATACGACTACGAACCGCAACAGTTCTACAATCAACATGCGCTG
CCGAATCAAGACCCCGCTTATAGTTCTCAGTACGACGTGAGCCAGATCCC
TCGGTCTTATCCGACACAATGGAATCCGCAGCCTGCTAGCAGCAGCAGCA
CCAATATCAATAATGTCAACAATGAGTCTAATCCTACATCGCATTATGAT
CCCGACCGTCTAGGACCGGGCTATGAACCGCCTATTCGGAGGGGGAGTAA
TGCTGAGTACTATGCCCAATCCGCCGCAGACATGCAAGCCCTTCCTCCTT
CAGCCCTGGAGACCGAACAGCAATCCCGCACCAACGGAAATGATCCCACT
ACCGCTGGTGCTACTGGTGAAGAAGAAGGCGAGCGCAGTCTAGGTGGAGC
TGTTCTCGGTGGTGCGACAGGGTACTATCTGGGACATAAGAAAGACCATG
GACTTTTGGGGGCAGTTGGGGGTGCGATCTTGGGAAATTTCGTTAGTAAT
AAGATGAAGAAGGACGATAGTGATGAAGAGGTGGAGGTGGATGATGATCG
CGAGACGGAGTACACTCGGTATCATAGTAGTCATTATCGACGGTCGTCGA
GTCATGGACATGGACACCATCATCATCACCACCATCACCATCATCATCAT
CATGGTCATGGACATCGGAGTCGGAGTCGAAGTCGGCATGAGGAGTATGA
GGAGTGGTAGATGTCCGACCCCTACCCCCAGCACCAGCAACCATCCTACC
CCTCTCCCGTCCCAAATAGCGAAACTCCGTACTACTCTCCCCCGGACGGC
GTCTACCAGCACGCAGGATACGACTACGAACCGCAACAGTTCTACAATCA
ACATGCGCTGCCGAATCAAGACCCCGCTTATAGTTCTCAGTACGACGTGA
GCCAGATCCCTCGGTCTTATCCGACACAATGGAATCCGCAGCCTGCTAGC
AGCAGCAGCACCAATATCAATAATGTCAACAATGAGTCTAATCCTACATC
GCATTATGATCCCGACCGTCTAGGACCGGGCTATGAACCGCCTATTCGGA
GGGGGAGTAATGCTGAGTACTATGCCCAATCCGCCGCAGACATGCAAGCC
CTTCCTCCTTCAGCCCTGGAGACCGAACAGCAATCCCGCACCAACGGAAA
TGATCCCACTACCGCTGGTGCTACTGGTGAAGAAGAAGGCGAGCGCAGTC
TAGGTGGAGCTGTTCTCGGTGGTGCGACAGGGTACTATCTGGGACATAAG
AAAGACCATGGACTTTTGGGGGCAGTTGGGGGTGCGATCTTGGGAAATTT
CGTTAGTAATAAGATGAAGAAGGACGATAGTGATGAAGAGGTGGAGGTGG
ATGATGATCGCGAGACGGAGTACACTCGGTATCATAGTAGTCATTATCGA
CGGTCGTCGAGTCATGGACATGGACACCATCATCATCACCACCATCACCA
TCATCATCATCATGGTCATGGACATCGGAGTCGGAGTCGAAGTCGGCATG
AGGAGTATGAGGAGTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0019867outer membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_67657M747DRAFT_67657Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_67657-T1M747DRAFT_67657-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_67657-T1.utr5p1M747DRAFT_67657-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_67657-T1.utr5p2M747DRAFT_67657-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_67657-T1.exon1M747DRAFT_67657-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_67657-T1.exon2M747DRAFT_67657-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_67657-T1.exon3M747DRAFT_67657-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_67657-T1.cdsM747DRAFT_67657-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_67657-T1.utr3p1M747DRAFT_67657-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008816
DBxrefPFAM:PF05433
DBxrefPFAM:PF13488
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:549821..551293 +
Powered by Drupal