You are here

Home

M747DRAFT_70540-T1, M747DRAFT_70540-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_70540-T1
Unique NameM747DRAFT_70540-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851922.1:121760..123698-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_70540-T1 ID=M747DRAFT_70540-T1|Name=M747DRAFT_70540-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1939bp|location=Sequence derived from alignment at KZ851922.1:121760..123698- (Aspergillus niger ATCC 13496)
AGGGAGGGGGTTACGACCATGTAATACTACAGTGGCTTCGGGATTTATTC
TTGTCGACCCGTCTGATTGGATCTACGCTCTCAGGGACTCGTCCTGCCAT
CCATGTCCCATTGGCATGATGGAGCCCCCGCCTGACATTCCTTTCTCCCA
CGCCCTCCTGACCATTCTCGGTTCGAATCATATTTATTTATGCTGCCCCA
TGGCGGACGCATTGCATTCTGTCACTGCAGCGTTGTGGCTCTCCCTAGCT
AGCTCAAGGCGCATCCTCGTGGAATGCTGTCCACAATGGCCTTTTCCTTC
GTTCTTCGTATTCTATCCCCCCTTTTTCTAATCCTGCAACTGTCGACGGC
AGCCTCGACGTCCACTCTTCGCCAATGCCTTCTCACTGCGGTGCAGAATG
ACCCAACCCTTGTCGCCGTGGATGGTGACCTTCTCTATCAGACGCTCGCC
GTTCAGGTGTACAACCTGAACTGGCCCGTCACGCCGGCAGCAGTGGCCTT
TCCCAAGTCCACCCAGCAAGTCGCCTCTATCGTCAATTGCGCCGTGTCGC
TGGGCTACAAAGTCCAGGCCAAGAGCGGAGGCCACAGTTATGGCAATTAC
GGTACCTAGTCCCTGCCCTCGTTCGTCAGCCGCTCACCCTACTGACCTCA
CCACACTTTAGGCCTCGGCGGCACCAATGGCGCGATCAGTATCAACCTCA
AGAATATGAAATCCTTCTCCATGAACTACACCAACTACCAGGCCACCGTG
GGTGCCGGCATGCTAAATGGCGAACTCGACGAATATCTCCACAACGCCGG
GGGGCGGGCCGTCGCGCACGGCACCTCTCCACAGATCGGCGTTGGAGGTC
ACGCAACCATCGGTGGACTGGGCCCCTCGGCGCGTCAATATGGAATGGAA
CTCGACCACGTTTTGGAAGCCGAAGTCGTTCTTGCCAATGGCACCGTAGT
GCGCGCCTCGTCTACCCAGAATTCGGACCTACTATTTGCCATCAAAGGCG
CCGGCGCCAGCTTCGGCGTCGTCACCGAGTTCGTCTTCCGCACTGAGCCC
GAACCGGGCTCCGCAGTCCAGTATACCTTCACCTTCGGACTCGGAAGCAC
TTCGGCGCGCGCCGACCTGTTCAAGAAATGGCAGAGCTTCATCTCTCAGC
CAGACCTCACCCGCAAATTTGCTAGCATCTGCACCCTTCTCGATCACGTC
TTGGTCATCTCCGGTACCTTCTTCGGCACCAAAGAAGAATACGACGCTCT
CGGTCTGGAGGACCAGTTCCCCGGCCACACCAACTCCACCGTCATTGTCT
TCACCGACTGGTTGGGCCTCGTGGCCCAATGGGCCGAGCAGTCCATCCTT
GACCTGACGGGCGGCATTCCCGCGGACTTCTACGCCCGCTGTCTCTCCTT
CACGGAGAAGACCCTCATCCCGTCCAACGGCGTCGACCAACTCTTCGAGT
ATCTCGACAGCGCTGATACCGGAGCACTGCTCTGGTTCGTTATCTTCGAC
CTCGAAGGTGGCGCCATCAATGACGTCCCCATGGACGCAACGGGGTATGC
CCACCGCGACACGCTCTTCTGGCTGCAGTCGTACGCCATCACGCTGGGGT
CTGTGTCGGAGACCACCTATGACTTCCTGGACAACGTGAACGAGATTATT
CGTAACAATACTCCCGGTCTGGGCAATGGAGTGTATCCAGGCTATGTGGA
TCCCCGTCTCCAGAACGCTCGCGAGGCGTACTGGGGTTCCAATCTGCCGA
GATTGATGCAGATCAAGTCGTTGTATGACCCGACCGATCTGTTTCATAAC
CCGCAGGGCGTGTTGCCTGCGTGATTTAATTGTGGAGTTCGGGATTGTTG
GGGGTTTTCTTGACTCGTACATGGGTTTCATTTCTTGGATAATTTATCAA
GTATTTTGTACCTAATGGGTTGTTTTAATGAAATCAGCC
back to top

Coding sequence (CDS) from alignment at KZ851922.1:121760..123698-

>M747DRAFT_70540-T1 ID=M747DRAFT_70540-T1|Name=M747DRAFT_70540-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2982bp|location=Sequence derived from alignment at KZ851922.1:121760..123698- (Aspergillus niger ATCC 13496)
GCCTCGGCGGCACCAATGGCGCGATCAGTATCAACCTCAAGAATATGAAA
TCCTTCTCCATGAACTACACCAACTACCAGGCCACCGTGGGTGCCGGCAT
GCTAAATGGCGAACTCGACGAATATCTCCACAACGCCGGGGGGCGGGCCG
TCGCGCACGGCACCTCTCCACAGATCGGCGTTGGAGGTCACGCAACCATC
GGTGGACTGGGCCCCTCGGCGCGTCAATATGGAATGGAACTCGACCACGT
TTTGGAAGCCGAAGTCGTTCTTGCCAATGGCACCGTAGTGCGCGCCTCGT
CTACCCAGAATTCGGACCTACTATTTGCCATCAAAGGCGCCGGCGCCAGC
TTCGGCGTCGTCACCGAGTTCGTCTTCCGCACTGAGCCCGAACCGGGCTC
CGCAGTCCAGTATACCTTCACCTTCGGACTCGGAAGCACTTCGGCGCGCG
CCGACCTGTTCAAGAAATGGCAGAGCTTCATCTCTCAGCCAGACCTCACC
CGCAAATTTGCTAGCATCTGCACCCTTCTCGATCACGTCTTGGTCATCTC
CGGTACCTTCTTCGGCACCAAAGAAGAATACGACGCTCTCGGTCTGGAGG
ACCAGTTCCCCGGCCACACCAACTCCACCGTCATTGTCTTCACCGACTGG
TTGGGCCTCGTGGCCCAATGGGCCGAGCAGTCCATCCTTGACCTGACGGG
CGGCATTCCCGCGGACTTCTACGCCCGCTGTCTCTCCTTCACGGAGAAGA
CCCTCATCCCGTCCAACGGCGTCGACCAACTCTTCGAGTATCTCGACAGC
GCTGATACCGGAGCACTGCTCTGGTTCGTTATCTTCGACCTCGAAGGTGG
CGCCATCAATGACGTCCCCATGGACGCAACGGGGTATGCCCACCGCGACA
CGCTCTTCTGGCTGCAGTCGTACGCCATCACGCTGGGGTCTGTGTCGGAG
ACCACCTATGACTTCCTGGACAACGTGAACGAGATTATTCGTAACAATAC
TCCCGGTCTGGGCAATGGAGTGTATCCAGGCTATGTGGATCCCCGTCTCC
AGAACGCTCGCGAGGCGTACTGGGGTTCCAATCTGCCGAGATTGATGCAG
ATCAAGTCGTTGTATGACCCGACCGATCTGTTTCATAACCCGCAGGGCGT
GTTGCCTGCGTGAATGCTGTCCACAATGGCCTTTTCCTTCGTTCTTCGTA
TTCTATCCCCCCTTTTTCTAATCCTGCAACTGTCGACGGCAGCCTCGACG
TCCACTCTTCGCCAATGCCTTCTCACTGCGGTGCAGAATGACCCAACCCT
TGTCGCCGTGGATGGTGACCTTCTCTATCAGACGCTCGCCGTTCAGGTGT
ACAACCTGAACTGGCCCGTCACGCCGGCAGCAGTGGCCTTTCCCAAGTCC
ACCCAGCAAGTCGCCTCTATCGTCAATTGCGCCGTGTCGCTGGGCTACAA
AGTCCAGGCCAAGAGCGGAGGCCACAGTTATGGCAATTACGGCCTCGGCG
GCACCAATGGCGCGATCAGTATCAACCTCAAGAATATGAAATCCTTCTCC
ATGAACTACACCAACTACCAGGCCACCGTGGGTGCCGGCATGCTAAATGG
CGAACTCGACGAATATCTCCACAACGCCGGGGGGCGGGCCGTCGCGCACG
GCACCTCTCCACAGATCGGCGTTGGAGGTCACGCAACCATCGGTGGACTG
GGCCCCTCGGCGCGTCAATATGGAATGGAACTCGACCACGTTTTGGAAGC
CGAAGTCGTTCTTGCCAATGGCACCGTAGTGCGCGCCTCGTCTACCCAGA
ATTCGGACCTACTATTTGCCATCAAAGGCGCCGGCGCCAGCTTCGGCGTC
GTCACCGAGTTCGTCTTCCGCACTGAGCCCGAACCGGGCTCCGCAGTCCA
GTATACCTTCACCTTCGGACTCGGAAGCACTTCGGCGCGCGCCGACCTGT
TCAAGAAATGGCAGAGCTTCATCTCTCAGCCAGACCTCACCCGCAAATTT
GCTAGCATCTGCACCCTTCTCGATCACGTCTTGGTCATCTCCGGTACCTT
CTTCGGCACCAAAGAAGAATACGACGCTCTCGGTCTGGAGGACCAGTTCC
CCGGCCACACCAACTCCACCGTCATTGTCTTCACCGACTGGTTGGGCCTC
GTGGCCCAATGGGCCGAGCAGTCCATCCTTGACCTGACGGGCGGCATTCC
CGCGGACTTCTACGCCCGCTGTCTCTCCTTCACGGAGAAGACCCTCATCC
CGTCCAACGGCGTCGACCAACTCTTCGAGTATCTCGACAGCGCTGATACC
GGAGCACTGCTCTGGTTCGTTATCTTCGACCTCGAAGGTGGCGCCATCAA
TGACGTCCCCATGGACGCAACGGGGTATGCCCACCGCGACACGCTCTTCT
GGCTGCAGTCGTACGCCATCACGCTGGGGTCTGTGTCGGAGACCACCTAT
GACTTCCTGGACAACGTGAACGAGATTATTCGTAACAATACTCCCGGTCT
GGGCAATGGAGTGTATCCAGGCTATGTGGATCCCCGTCTCCAGAACGCTC
GCGAGGCGTACTGGGGTTCCAATCTGCCGAGATTGATGCAGATCAAGTCG
TTGTATGACCCGACCGATCTGTTTCATAACCCGCAGGGCGTGTTGCCTGC
GTGAATGCTGTCCACAATGGCCTTTTCCTTCGTTCTTCGTATTCTATCCC
CCCTTTTTCTAATCCTGCAACTGTCGACGGCAGCCTCGACGTCCACTCTT
CGCCAATGCCTTCTCACTGCGGTGCAGAATGACCCAACCCTTGTCGCCGT
GGATGGTGACCTTCTCTATCAGACGCTCGCCGTTCAGGTGTACAACCTGA
ACTGGCCCGTCACGCCGGCAGCAGTGGCCTTTCCCAAGTCCACCCAGCAA
GTCGCCTCTATCGTCAATTGCGCCGTGTCGCTGGGCTACAAAGTCCAGGC
CAAGAGCGGAGGCCACAGTTATGGCAATTACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_70540M747DRAFT_70540Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_70540-T1M747DRAFT_70540-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_70540-T1.cdsM747DRAFT_70540-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_70540-T1.utr3p1M747DRAFT_70540-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_70540-T1.exon2M747DRAFT_70540-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_70540-T1.exon1M747DRAFT_70540-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_70540-T1.utr5p1M747DRAFT_70540-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-26)
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR012951
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
DBxrefPFAM:PF08031
Productglucooligosaccharide oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851922.1supercontigKZ851922.1:121760..123698 -
Powered by Drupal