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M747DRAFT_77079-T1, M747DRAFT_77079-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_77079-T1
Unique NameM747DRAFT_77079-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:385902..387209+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_77079-T1 ID=M747DRAFT_77079-T1|Name=M747DRAFT_77079-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1308bp|location=Sequence derived from alignment at KZ851924.1:385902..387209+ (Aspergillus niger ATCC 13496)
TGCGACAACGGCAATTTGCCACCATAGAATAAAAACCACGGATTTCTGGA
CAATTCTGCCTTATTGATCACGGAAGCCGGGTCGTGTGTTGCAGTCGATT
CAGTGGTGAGATTTGAACCACATCAGGAAACCGCAACTGATCTAGACGCG
TGTGCGCGCGATCAACAGGCTAGATCTATTGCCATCCCCCTAGACTTCTT
TGCAGTATAGCTACAAAAACCACTGGATTCCGACGCTACAGAAGTCTGAA
CCCTGTGTGAAAGATGACTGCCGACACCGATACTCAGAATGAGTACGACG
ATGGGCTTCCGGGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGTG
AGCAATTCAAACGGCAAAATAATATATGTGATGACGGGTAGGTGAAGTGC
ATGTACTGATGCTCTTCGTAACAGGGTGTCTCGGGCCTGACAAGTAGGGA
TATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTGAGTCGGTTGCAT
ATACGTACGTCTATCCTTTGCCAGTCTGCTTCCGTGCCATCGCCCCTTTT
TCAGTTCTGCTCACAAGCATGTTCTTGATTATGGTACAGGCCAAAACGTT
TGTTGGAACAAATCAAGGGTATTTCGGAACAGAAAGCCACGAAAGTCCTG
GTTGAGGGTGAGTATTGCTCTTGTGGCATTGGAACTCGTTCGCGAGGATC
TTGTCTGACTCAATGAATTTGTAGCTATGAAGCTTGTACCGATGGGCTTT
ACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTTATCTCAATTAC
GACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGGCATTGAGACAG
GCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAAAAAGTCAGATA
TGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGATATGGGCGGAGG
AGAAGGAAAATGCCTATACATTGACACAGAAGGTACCTTCCGACCAGTGC
GTCTGTTGGCGGTTGCACAGCGATACGGGCTGGTGGGAGAGGAGGTGCTG
GATAATGTGGCATACGCTCGTGCGTACAACTCAGACCATCAACTTCAGCT
ACTCAACCAAGCTTCTCAGATGATGTGTGAGACTCGGTTCTCGCTCCTTG
TCGTTGATTCTGCCACTTCTCTGTACCGGACGGACTTCAACGGCCGTGGT
GAATTGTCGTCGAGACAAACACATCTCGCGAAGTTCATGCGTACTCTGCA
GCGCCTCGCTGATGAGTTTGGTATTGCGGTCGTCATTACGAACCAGGTCG
TTGCCCAG
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Coding sequence (CDS) from alignment at KZ851924.1:385902..387209+

>M747DRAFT_77079-T1 ID=M747DRAFT_77079-T1|Name=M747DRAFT_77079-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2505bp|location=Sequence derived from alignment at KZ851924.1:385902..387209+ (Aspergillus niger ATCC 13496)
ATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCGGG
CCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGGTGTCTCGGGCCTGA
CAAGTAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTGAG
TCGGTTGCATATACGCCAAAACGTTTGTTGGAACAAATCAAGGGTATTTC
GGAACAGAAAGCCACGAAAGTCCTGGTTGAGGCTATGAAGCTTGTACCGA
TGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTTATC
TCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGGCAT
TGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAAAAA
GTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGATATG
GGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGATGATGTGTG
AATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCGG
GCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGGTGTCTCGGGCCTG
ACAAGTAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTGA
GTCGGTTGCATATACGCCAAAACGTTTGTTGGAACAAATCAAGGGTATTT
CGGAACAGAAAGCCACGAAAGTCCTGGTTGAGGCTATGAAGCTTGTACCG
ATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTTAT
CTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGGCA
TTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAAAA
AGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGATAT
GGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGATGATGTGT
GAATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCCG
GGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGGTGTCTCGGGCCT
GACAAGTAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGTTG
AGTCGGTTGCATATACGCCAAAACGTTTGTTGGAACAAATCAAGGGTATT
TCGGAACAGAAAGCCACGAAAGTCCTGGTTGAGGCTATGAAGCTTGTACC
GATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTTA
TCTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGGC
ATTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAAA
AAGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGATA
TGGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGATGATGTG
TGAATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTCC
GGGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGGTGTCTCGGGCC
TGACAAGTAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGTT
GAGTCGGTTGCATATACGCCAAAACGTTTGTTGGAACAAATCAAGGGTAT
TTCGGAACAGAAAGCCACGAAAGTCCTGGTTGAGGCTATGAAGCTTGTAC
CGATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACTT
ATCTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTGG
CATTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGAA
AAAGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGAT
ATGGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGATGATGT
GTGAATGACTGCCGACACCGATACTCAGAATGAGTACGACGATGGGCTTC
CGGGCCCCGGAGCGCCCACGCCACTCTCTTCCCTGGAGGGTGTCTCGGGC
CTGACAAGTAGGGATATTAAGCTGTTTGTTGATGCTGGATACAACACTGT
TGAGTCGGTTGCATATACGCCAAAACGTTTGTTGGAACAAATCAAGGGTA
TTTCGGAACAGAAAGCCACGAAAGTCCTGGTTGAGGCTATGAAGCTTGTA
CCGATGGGCTTTACCACCGCGACCGAAATGCATGCGCGACGAAACGAACT
TATCTCAATTACGACAGGCTCGAAACAGTTAGACACCCTTCTTGGAGGTG
GCATTGAGACAGGCTCTATCACAGAGATCTTTGGAGAATTCAGGACAGGA
AAAAGTCAGATATGTCATACACTCGCTGTGACTTGCCAATTGCCTTTTGA
TATGGGCGGAGGAGAAGGAAAATGCCTATACATTGACACAGAAGATGATG
TGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAD51M747DRAFT_77079Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77079-T1M747DRAFT_77079-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77079-T1.utr5p1M747DRAFT_77079-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_77079-T1.utr5p2M747DRAFT_77079-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77079-T1.exon1M747DRAFT_77079-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_77079-T1.exon2M747DRAFT_77079-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_77079-T1.exon3M747DRAFT_77079-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_77079-T1.exon4M747DRAFT_77079-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_77079-T1.exon5M747DRAFT_77079-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_77079-T1.exon6M747DRAFT_77079-T1.exon6Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77079-T1.cdsM747DRAFT_77079-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77079-T1.utr3p1M747DRAFT_77079-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519241.3
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020588
DBxrefInterPro:IPR013632
DBxrefPFAM:PF14520
Productrecombinase rad51
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:385902..387209 +
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