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M747DRAFT_77540-T1, M747DRAFT_77540-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_77540-T1
Unique NameM747DRAFT_77540-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:442385..444221-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_77540-T1 ID=M747DRAFT_77540-T1|Name=M747DRAFT_77540-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1837bp|location=Sequence derived from alignment at KZ851924.1:442385..444221- (Aspergillus niger ATCC 13496)
GATTCTCAGTGGAAAGCTGAAGCCCAACCTTGGACGTTTTGACAACCCTC
CCGACTGGGAAGAAATCCTCAAGTACTTCCGTGGTTCCGAACTGCAGAGT
ACGTATAAACAGTATCGTGGAGTTGAGTTTTACAGACTTCTAATTGTATG
CAGACTACTTCACCAAGGTTCTGGAGGATGATCTCAAGGCTGTTGTGAAG
CCTCAATATGTCGATCAGATTCCCAGGGCTGTCAAGGGCCCCGTTCAGAA
CGTTGGAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTGGATCACA
TTCTCGACACTCTTGGTATGGCGCAGTTGCAAAACGAGCTTATTAACAAC
ACTGCTAATGATATATGCAGAGTTGAGACAGGTCCAAGACCGTGATATCG
GTCACCTTTCTGGTGGAGAGCTCCAGCGTTTCGCCATTGGTCTGGTTTGC
GTCCAGAAGGCTGACGTGTAAGAACAATATCTGGAACCGTCTCTATTTGC
GCAAGAGCTGACAAACTTTACAGTTACATGTTCGACGAGCCTTCCTCCTA
TCTCGATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGAGAGCTCC
TCCGCCCTGACGATTATGTCATCGTTGTCGAGCACGATTTGTCTGTTCTT
GATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAAGACCCGCCCTTTA
CGGTGTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAACATCTTCT
TGGATGGTCACATCCCTACCGAGAACTTGCGATTCCGTGAGGAGTCTCTT
ACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGGTGGACAGAGCCCG
TGCTTTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTCCACCTCA
AGATCGATGCTGGAAGTTTCACCGACTCTGAGATTATTGTCATGATGGGT
GAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGCTTGCTGGTGCTGA
GAAGCCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCCATGAAGC
CTCAGAAGATCACCCCCAAGTTCCAGGGTACCGTCCGTCAGCTGTTCTTC
AAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCCAGACTGATGTCTA
CAAGCCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAGAATCTGT
CTGGTGGTGAATTGCAGCGTGTTGCTATTGTCCTGGCTCTGGGAATCCCC
GCCGATATCTACCTCATTGACGAGCCTAGTGCTTACCTGGACTCCGAGCA
GCGTATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCACACCAAGA
AGACTGCTTTCATCGTCGAGCACGATTTCATCATGGCCACTTATCTCGCC
GATCGTGTTATCGTCTTCGATGGTCAGCCCTCCGTCGATGCTCACGCCAA
CGCCCCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAGAACCTGG
ATGTCACCTTCCGTCGTGACCCCAACAGTTACCGCCCTCGTATTAACAAG
TACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCGGCAACTACGTAAG
TCTACAATCTTTTCACCCCAGTACTTGCACGGTTCGGCCGTGGTAGTATC
GTCTCTGTTCTATTGGAAGTATAATACTGACATGTATGTTCCACAGTTCT
TCTTGGAAGAAGAGAAATGAGGAGGTTGTTCCGGGCAAGTATGACCGCGT
GCCTCACCAACGTGACGGCCGCGACTCGGACCAGCGGCGTCGCTATCGTC
GCTGGGGCTACCTTCGGGTAGTGGCGTTTTTCGGCGT
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Coding sequence (CDS) from alignment at KZ851924.1:442385..444221-

>M747DRAFT_77540-T1 ID=M747DRAFT_77540-T1|Name=M747DRAFT_77540-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4068bp|location=Sequence derived from alignment at KZ851924.1:442385..444221- (Aspergillus niger ATCC 13496)
TTCTTCTTGGAAGAAGAGAAATGATTACATGTTCGACGAGCCTTCCTCCT
ATCTCGATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGAGAGCTC
CTCCGCCCTGACGATTATGTCATCGTTGTCGAGCACGATTTGTCTGTTCT
TGATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAAGACCCGCCCTTT
ACGGTGTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAACATCTTC
TTGGATGGTCACATCCCTACCGAGAACTTGCGATTCCGTGAGGAGTCTCT
TACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGGTGGACAGAGCCC
GTGCTTTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTCCACCTC
AAGATCGATGCTGGAAGTTTCACCGACTCTGAGATTATTGTCATGATGGG
TGAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGCTTGCTGGTGCTG
AGAAGCCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCCATGAAG
CCTCAGAAGATCACCCCCAAGTTCCAGGGTACCGTCCGTCAGCTGTTCTT
CAAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCCAGACTGATGTCT
ACAAGCCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAGAATCTG
TCTGGTGGTGAATTGCAGCGTGTTGCTATTGTCCTGGCTCTGGGAATCCC
CGCCGATATCTACCTCATTGACGAGCCTAGTGCTTACCTGGACTCCGAGC
AGCGTATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCACACCAAG
AAGACTGCTTTCATCGTCGAGCACGATTTCATCATGGCCACTTATCTCGC
CGATCGTGTTATCGTCTTCGATGGTCAGCCCTCCGTCGATGCTCACGCCA
ACGCCCCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAGAACCTG
GATGTCACCTTCCGTCGTGACCCCAACAGTTACCGCCCTCGTATTAACAA
GTACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCGGCAACTACATGT
CGATCAGATTCCCAGGGCTGTCAAGGGCCCCGTTCAGAACGTTGGAGCCC
TCATCAAGGCCCGCGCCCAGTTGGACAACCTGGATCACATTCTCGACACT
CTTGGTATGGCGCAGTTGCAAAACGAGCTTATTAACAACACTGCTAATGA
TATATGCAGAGTTGAGACAGGTCCAAGACCGTGATATCGGTCACCTTTCT
GGTGGAGAGCTCCAGCGTTTCGCCATTGGTCTGGTTTGCGTCCAGAAGGC
TGACGTTTCTTCTTGGAAGAAGAGAAATGATTACATGTTCGACGAGCCTT
CCTCCTATCTCGATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGA
GAGCTCCTCCGCCCTGACGATTATGTCATCGTTGTCGAGCACGATTTGTC
TGTTCTTGATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAAGACCCG
CCCTTTACGGTGTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAAC
ATCTTCTTGGATGGTCACATCCCTACCGAGAACTTGCGATTCCGTGAGGA
GTCTCTTACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGGTGGACA
GAGCCCGTGCTTTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTC
CACCTCAAGATCGATGCTGGAAGTTTCACCGACTCTGAGATTATTGTCAT
GATGGGTGAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGCTTGCTG
GTGCTGAGAAGCCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCC
ATGAAGCCTCAGAAGATCACCCCCAAGTTCCAGGGTACCGTCCGTCAGCT
GTTCTTCAAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCCAGACTG
ATGTCTACAAGCCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAG
AATCTGTCTGGTGGTGAATTGCAGCGTGTTGCTATTGTCCTGGCTCTGGG
AATCCCCGCCGATATCTACCTCATTGACGAGCCTAGTGCTTACCTGGACT
CCGAGCAGCGTATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCAC
ACCAAGAAGACTGCTTTCATCGTCGAGCACGATTTCATCATGGCCACTTA
TCTCGCCGATCGTGTTATCGTCTTCGATGGTCAGCCCTCCGTCGATGCTC
ACGCCAACGCCCCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAG
AACCTGGATGTCACCTTCCGTCGTGACCCCAACAGTTACCGCCCTCGTAT
TAACAAGTACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCGGCAACT
ACATGTCGATCAGATTCCCAGGGCTGTCAAGGGCCCCGTTCAGAACGTTG
GAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTGGATCACATTCTC
GACACTCTTGGTATGGCGCAGTTGCAAAACGAGCTTATTAACAACACTGC
TAATGATATATGCAGAGTTGAGACAGGTCCAAGACCGTGATATCGGTCAC
CTTTCTGGTGGAGAGCTCCAGCGTTTCGCCATTGGTCTGGTTTGCGTCCA
GAAGGCTGACGTTTCTTCTTGGAAGAAGAGAAATGATTACATGTTCGACG
AGCCTTCCTCCTATCTCGATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCC
ATCAGAGAGCTCCTCCGCCCTGACGATTATGTCATCGTTGTCGAGCACGA
TTTGTCTGTTCTTGATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAA
GACCCGCCCTTTACGGTGTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGT
ATCAACATCTTCTTGGATGGTCACATCCCTACCGAGAACTTGCGATTCCG
TGAGGAGTCTCTTACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGG
TGGACAGAGCCCGTGCTTTCGCCTACCCCAGCATGGAGAAGACTCTCGGT
AACTTCCACCTCAAGATCGATGCTGGAAGTTTCACCGACTCTGAGATTAT
TGTCATGATGGGTGAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGC
TTGCTGGTGCTGAGAAGCCTGACGGTGGCAAGAGCGTTCCTCGCCTGAAC
ATCTCCATGAAGCCTCAGAAGATCACCCCCAAGTTCCAGGGTACCGTCCG
TCAGCTGTTCTTCAAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCC
AGACTGATGTCTACAAGCCCCTCAAGATTGATGACTTCATTGACCAGGAA
GTCCAGAATCTGTCTGGTGGTGAATTGCAGCGTGTTGCTATTGTCCTGGC
TCTGGGAATCCCCGCCGATATCTACCTCATTGACGAGCCTAGTGCTTACC
TGGACTCCGAGCAGCGTATCGTGGCCTCCAGGGTCATCAAGCGTTTCATC
ATGCACACCAAGAAGACTGCTTTCATCGTCGAGCACGATTTCATCATGGC
CACTTATCTCGCCGATCGTGTTATCGTCTTCGATGGTCAGCCCTCCGTCG
ATGCTCACGCCAACGCCCCTGAGTCCCTGGTCACTGGTTGCAACACTTTC
TTGAAGAACCTGGATGTCACCTTCCGTCGTGACCCCAACAGTTACCGCCC
TCGTATTAACAAGTACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCG
GCAACTACATGTCGATCAGATTCCCAGGGCTGTCAAGGGCCCCGTTCAGA
ACGTTGGAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTGGATCAC
ATTCTCGACACTCTTGGTATGGCGCAGTTGCAAAACGAGCTTATTAACAA
CACTGCTAATGATATATGCAGAGTTGAGACAGGTCCAAGACCGTGATATC
GGTCACCTTTCTGGTGGAGAGCTCCAGCGTTTCGCCATTGGTCTGGTTTG
CGTCCAGAAGGCTGACGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RLI1_2M747DRAFT_77540Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77540-T1M747DRAFT_77540-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77540-T1.cdsM747DRAFT_77540-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77540-T1.utr3p1M747DRAFT_77540-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77540-T1.exon4M747DRAFT_77540-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_77540-T1.exon3M747DRAFT_77540-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_77540-T1.exon2M747DRAFT_77540-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_77540-T1.exon1M747DRAFT_77540-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_77540-T1.utr5p2M747DRAFT_77540-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_77540-T1.utr5p1M747DRAFT_77540-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519241.3
NoteBUSCO:EOG09261127
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR017871
DBxrefInterPro:IPR003439
DBxrefInterPro:IPR003593
DBxrefPFAM:PF00005
ProductFe-S cluster-binding ribosome biosynthesis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:442385..444221 -
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