You are here

Home

M747DRAFT_79367-T1, M747DRAFT_79367-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_79367-T1
Unique NameM747DRAFT_79367-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851925.1:227938..230342-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_79367-T1 ID=M747DRAFT_79367-T1|Name=M747DRAFT_79367-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2405bp|location=Sequence derived from alignment at KZ851925.1:227938..230342- (Aspergillus niger ATCC 13496)
TCGGAAACAAAAGCTGCTACGTTGGCGGGGTTATTGGCTCTGGTCGCTTG
AATTGATCTTTTTGTTCTTTGCGTATAATGCGCTGATCCTTATCCCGTCA
CATATACGTTCTAAAACCTCCCACATCATGCATTCCTACGTGCGACCAAA
TCAATTCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGAAAG
TCGTTCCCAATACGTATGCGCGCAAATGCTCCAATTTCTCAGGAATCGCA
CAGTGCTAATTATATTTTACAGACAAATTTCTCTAGGCAAATACGGCGCT
TTCCCCGCCAACCAGATCATTGGCCGCCCCTTCTATCTGACCTTCGAGAT
CCACGAAACCCCCGGACAAGCTGATAGCACCTACCTCCGCATCGTATCGG
CGGCGGAACTCCACGCGGAATCCCTCATCACCGAGGGCGAAGGCGACGGC
GATGATGTGGAGGTCAATGAAGACGGCACCCCGGTGCGGTCGAATCGCGA
AACCATCGACGACCGATCTACGCAAAAGTTAACGCTAGAGGAGATTCTGG
CGCTGAAGAAGGAAAGCACCGGCGCGGGAAGGGAAATTATTGCGAAGCTG
CTCGAGTCGCATCAGGCCTTGGATCAGAAGACGGCATTCTCACTGGCCAA
GTATAAGCTGCGGAAGGAGAAGAAGTACATGAAGCGGTTCACAGTGATTC
CGTTGGATGTCAGTCTCTTGACGAACTACATGCTTGAGGACAAGGATGCA
GCTCGGACTATGGAATTGCGCGACGAGCTCATCGGGCTGATTGGGTGTTG
GGGAAATGTACACCATGGTGGAAGCACCTCTTTTGACGAGACTGTTACGT
CGAAACCGAATGGTCGCTATCTGGTTGTTGATGATACAGGCGGTCTGGTC
GTCGCAGCTTTGGCTGAGAGAATGGGAATTCTGTACCCTCATGATGGCGA
GAACGATCAGGAGCAACAGGACGCCATTGAGCGACCTGCCGCGGCGGAAG
CTGATGAGGCAGAGAAGCCCCAAGACGGCGAAGAGAAAGCCCAGGATGGA
GAGGAGCAATCCACGACGACCACACATCGCCCACCCCGTCGGCCACAGAT
GTCCGCTTCAGGAAACACTATCACCCTTCTCCACGCCAACAAGCAGCCTA
ACCTAAGTCTCTTGAAATACTTTGGCTACGAACAAGACAGCCCGAGCGAC
ACACATCCCCTCTACACAAACCTCAAGACCGTCTCTTTCATGCAGCTGCT
CGACCCCATGGCGGACAACATCTACTCCGAGGAGCCGTCAGTAGTACCCG
AAGAAGAGCTTGCTACATACAAGGCCAGCAAGCGTAGCGCCTACCACCGC
AAGCGCGGGCGTTGGATGCGCGTCCGCAAGGTAGTCGACGAAGCTCGGGC
GGGCGGCTTCGATGGTCTCATTATCGCCTCTCTAATGAGCCCGACGAGTA
TCCTGAAATATACTGTCCCATTGGTGGGAGGCTCGGCACCGATTACTATC
TACTCACCCACCGTTGAACCGTTGACAGAGGTAATGGACTTGTATTCGAC
AGCGCGCAAGAACGCCTACATCGCTCGGAAGCGTGAGCTACAAGAACAGC
AACAGGCTGAGGGCCAGGATGAGTCTGGCAAGATGCGCCCTGCACTGGAA
GAGGAATTCACAGTCGACCCTACCATGTTGCTTGCGCCGACACTGCAGAC
CTCCCGAGTACGTGTCTGGCAGGTCCTTCCTGGGCGGACACATCCGTTGA
TGTCGGGACGTGGTGGTGCAGAAGGGTACATCTTCCATGGCATCCGGGTC
ATCCCGACGCAGGAGATCATTGAGGCAGCTGGAAATCCAGGCCGGAAGAG
GAGGAAGGTGACCAAGGAGACAGAGACACCGACGCAGACGCAAACTCCGA
CGGAGACGCAGACAGGCAGCGGGGATGTGGAGATGACGTCGTGACCTATC
TCAGTTCAGATTCTATATTATTACCTTACCTGTAAGATAGCCGGGAATGG
GCTGAAAGAATATACCATGTGAACATCACTACATGAAATAAAGAGCCCCG
TCGAAGTGATAAGAGGGAGCCATCTGCCCGACAGCTCCAGGATATTCGTC
ACCGACACCATCGGAAATGATACCAACCAAACACAAAGCAATTGGATCAA
AACGCTTAAAGTTGAAATATACACAGAGTAAAAGTGACTAGACACGGACA
ACAACTAAAGGTCCAGTTTCGAGTTTGTTCATACGCTGAGTTGTGGCAGC
AGACAAAAGCACATCCATCTATCTATCAATCAATCAATCAATCAATCATC
CTAGAAGCTCTTTCCCATGAACTTTCTCTTGGCGAAACTAAGCCACCACT
ACACCCTAATTAGCCTCCCATCTGTAATTGCAGGGTAGAAAGAAAGAAAT
ACATA
back to top

Coding sequence (CDS) from alignment at KZ851925.1:227938..230342-

>M747DRAFT_79367-T1 ID=M747DRAFT_79367-T1|Name=M747DRAFT_79367-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3516bp|location=Sequence derived from alignment at KZ851925.1:227938..230342- (Aspergillus niger ATCC 13496)
ACAAATTTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCAGATCATTG
GCCGCCCCTTCTATCTGACCTTCGAGATCCACGAAACCCCCGGACAAGCT
GATAGCACCTACCTCCGCATCGTATCGGCGGCGGAACTCCACGCGGAATC
CCTCATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGTCAATGAAG
ACGGCACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACCGATCTACG
CAAAAGTTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAAAGCACCGG
CGCGGGAAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCAGGCCTTGG
ATCAGAAGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGAAGGAGAAG
AAGTACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGTCTCTTGAC
GAACTACATGCTTGAGGACAAGGATGCAGCTCGGACTATGGAATTGCGCG
ACGAGCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACACCATGGTGGA
AGCACCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGTCGCTATCT
GGTTGTTGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGCTGAGAGAA
TGGGAATTCTGTACCCTCATGATGGCGAGAACGATCAGGAGCAACAGGAC
GCCATTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAGAAGCCCCA
AGACGGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCACGACGACCA
CACATCGCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAAACACTATC
ACCCTTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTGAAATACTT
TGGCTACGAACAAGACAGCCCGAGCGACACACATCCCCTCTACACAAACC
TCAAGACCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGGACAACATC
TACTCCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCTACATACAA
GGCCAGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTGGATGCGCG
TCCGCAAGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATGGTCTCATT
ATCGCCTCTCTAATGAGCCCGACGAGTATCCTGAAATATACTGTCCCATT
GGTGGGAGGCTCGGCACCGATTACTATCTACTCACCCACCGTTGAACCGT
TGACAGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACGCCTACATC
GCTCGGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGCCAGGATGA
GTCTGGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGTCGACCCTA
CCATGTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTGTCTGGCAG
GTCCTTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGTGGTGCAGA
AGGGTACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGAGATCATTG
AGGCAGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCAAGGAGACA
GAGACACCGACGCAGACGCAAACTCCGACGGAGACGCAGACAGGCAGCGG
GGATGTGGAGATGACGTCGTGAATGCATTCCTACGTGCGACCAAATCAAT
TCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGAAAGTCGTT
CCCAATACACAAATTTCTCTAGGCAAATACGGCGCTTTCCCCGCCAACCA
GATCATTGGCCGCCCCTTCTATCTGACCTTCGAGATCCACGAAACCCCCG
GACAAGCTGATAGCACCTACCTCCGCATCGTATCGGCGGCGGAACTCCAC
GCGGAATCCCTCATCACCGAGGGCGAAGGCGACGGCGATGATGTGGAGGT
CAATGAAGACGGCACCCCGGTGCGGTCGAATCGCGAAACCATCGACGACC
GATCTACGCAAAAGTTAACGCTAGAGGAGATTCTGGCGCTGAAGAAGGAA
AGCACCGGCGCGGGAAGGGAAATTATTGCGAAGCTGCTCGAGTCGCATCA
GGCCTTGGATCAGAAGACGGCATTCTCACTGGCCAAGTATAAGCTGCGGA
AGGAGAAGAAGTACATGAAGCGGTTCACAGTGATTCCGTTGGATGTCAGT
CTCTTGACGAACTACATGCTTGAGGACAAGGATGCAGCTCGGACTATGGA
ATTGCGCGACGAGCTCATCGGGCTGATTGGGTGTTGGGGAAATGTACACC
ATGGTGGAAGCACCTCTTTTGACGAGACTGTTACGTCGAAACCGAATGGT
CGCTATCTGGTTGTTGATGATACAGGCGGTCTGGTCGTCGCAGCTTTGGC
TGAGAGAATGGGAATTCTGTACCCTCATGATGGCGAGAACGATCAGGAGC
AACAGGACGCCATTGAGCGACCTGCCGCGGCGGAAGCTGATGAGGCAGAG
AAGCCCCAAGACGGCGAAGAGAAAGCCCAGGATGGAGAGGAGCAATCCAC
GACGACCACACATCGCCCACCCCGTCGGCCACAGATGTCCGCTTCAGGAA
ACACTATCACCCTTCTCCACGCCAACAAGCAGCCTAACCTAAGTCTCTTG
AAATACTTTGGCTACGAACAAGACAGCCCGAGCGACACACATCCCCTCTA
CACAAACCTCAAGACCGTCTCTTTCATGCAGCTGCTCGACCCCATGGCGG
ACAACATCTACTCCGAGGAGCCGTCAGTAGTACCCGAAGAAGAGCTTGCT
ACATACAAGGCCAGCAAGCGTAGCGCCTACCACCGCAAGCGCGGGCGTTG
GATGCGCGTCCGCAAGGTAGTCGACGAAGCTCGGGCGGGCGGCTTCGATG
GTCTCATTATCGCCTCTCTAATGAGCCCGACGAGTATCCTGAAATATACT
GTCCCATTGGTGGGAGGCTCGGCACCGATTACTATCTACTCACCCACCGT
TGAACCGTTGACAGAGGTAATGGACTTGTATTCGACAGCGCGCAAGAACG
CCTACATCGCTCGGAAGCGTGAGCTACAAGAACAGCAACAGGCTGAGGGC
CAGGATGAGTCTGGCAAGATGCGCCCTGCACTGGAAGAGGAATTCACAGT
CGACCCTACCATGTTGCTTGCGCCGACACTGCAGACCTCCCGAGTACGTG
TCTGGCAGGTCCTTCCTGGGCGGACACATCCGTTGATGTCGGGACGTGGT
GGTGCAGAAGGGTACATCTTCCATGGCATCCGGGTCATCCCGACGCAGGA
GATCATTGAGGCAGCTGGAAATCCAGGCCGGAAGAGGAGGAAGGTGACCA
AGGAGACAGAGACACCGACGCAGACGCAAACTCCGACGGAGACGCAGACA
GGCAGCGGGGATGTGGAGATGACGTCGTGAATGCATTCCTACGTGCGACC
AAATCAATTCGTCGCCTTCAAGCTCCCCTCCGAGGCGACGAGGATCCAGA
AAGTCGTTCCCAATAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031515tRNA (m1A) methyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRM6M747DRAFT_79367Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_79367-T1M747DRAFT_79367-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_79367-T1.cdsM747DRAFT_79367-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_79367-T1.utr3p1M747DRAFT_79367-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_79367-T1.exon2M747DRAFT_79367-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_79367-T1.exon1M747DRAFT_79367-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_79367-T1.utr5p1M747DRAFT_79367-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261I0F
DBxrefInterPro:IPR017423
DBxrefPFAM:PF04189
ProducttRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851925.1supercontigKZ851925.1:227938..230342 -
Powered by Drupal