You are here

Home

M747DRAFT_855-T1, M747DRAFT_855-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_855-T1
Unique NameM747DRAFT_855-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:230482..232361+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_855-T1 ID=M747DRAFT_855-T1|Name=M747DRAFT_855-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1880bp|location=Sequence derived from alignment at KZ851899.1:230482..232361+ (Aspergillus niger ATCC 13496)
ATGGACTCCGACTCCGGTAATTCTTTTTTTTACAGAGTAATTTCAGAACA
ACGCCACGCGCTTCACTTCTACTTCGATCTCACTGCTAAAGAGAGAGATA
TATAGTTTTCAGCGCAATTTGTTATTTATCCCTTATTGAGAAAATTGATA
TCACCACTACGCAATGCCACCTCCCCTCCCCTCCCACCATCGCGGCATGA
CCGCAAACCCCGTCCGACCAAGCAGATACCGACCCGGCAAAGCCATCGCA
GAGGAGCCCTCCTCGTCCGAAGAAGAGGATGAAGATGAACAAGAAGCTAA
AAAGGAAGCCGAGCGACAGAGACAGCAGGAACGGCGCAGACTCGAACAAC
AGCGACGACAAGCTCCCAAGGCGAGCTCGTTTCCTGCGGGTGCGGCGAAG
ATTGCTCGGGGTGTGAAGGATGTGAAAATCGAGGAGGAAGAAGCAGATGA
GGATGAAGAGGGGTTTGTGACGGAGGAGGAGGAGGAAGAAGAAGAGGCCA
AGCCTGCGAAGGCGGCTGCTCCTGTTGCTGGCGACAGGGTGGCTGCTCCG
GCGCGGACGGCTACGGTGAAGGAGATATCGGAAGAAGAGGAGGAGGATGA
AGAGGAAGAGGAAGAGAGTTCTGAAGAAGAAAGCAGTTCCGAAGACGAGG
CTCCGCGCAGAGTGCTTTTACGACCTACGTTCATCAAGAAAGACAAGCGC
AACAACGCCCCCGGTCAAACACAGAACGGCCAAGCTGCGTCAGGCACAGT
GGTGGATACTTCAGCCGAGACAGAGGCGCGTCGGATACAGCGACAGGAGA
AAGCAGACGCCTTGATTCGGGAACAACTAGAGAAAGACGCCATTGCGCGG
AGCGAGGCGAATCGGGCGTGGGATGACGACGAGCTCGAGGTGGGCGAAGA
AGGTGCAATTGACGATACCGACGGAAAGGATCCAGAAGCGGAGTACGCAG
CATGGAAGCTCCGAGAGCTGAAGCGCATCAAGCGCGAGCGTGAAGCGATC
GAGGCTGCAGAGAAGGAGCGAGAAGAAGTCGAGCGGCGCAGGAATCTCAC
TGCCGAGGAGCGCGATCGCGAAGACCGCGAATACCTCGCCAAGCAGGAGG
AAGAGAAGGAGGCTAATCGCGGCCAGGCCGGGTACATGCAGCGATACTTC
CATAAGGGAGCGTTTTTCAGCGAAGACATGCAGCGCGAGGGACTTGCTCA
GAGGAATATCATGGGTGCGAAGTTTGCGGACGATGTCTCGCGGGAGACTC
TGCCCCAGTACATGCAGATCCGTGATATGACGAAGCTTGGAAAGAAGGGA
CGCACGCGCTATAGGGATCTGAAATCAGAGGACACAGGTCGTTTTGGCGA
AGGGTTCCAGAACAGGTCTCGTCATCGCGATGGTGGAGCTCCCATTGGCA
TTACCGACGAGCGATTCATGCCTGATCGTGACCGTGATGAAAGACCCAAG
GGACCCACTGGGGCGAATGCCTCTGCTGTGCGCGAGAGACGGAGGTCTAG
GTCACGATCATACTCGCCGCGACGAGAGCGTCGCGATCGTTCAGCAGACC
GGTATAGGCCCGATACAAGCAGTCGCAGGAAACGGAGCCCGTCACCTTAC
GAAGATCGGGAGAAACGGAGGCGCGTGAGTGTTTCGCCAGAACGGTGAAA
GAGAAGCATGCAAATAGGGACATAAGGACATTCTATTTCTAATCGGTTCG
TTGGGAAACTCTTGAGATCAAGGATGGATTAGGGTCATGATCGATGCATT
TTAGGACGGATGTTCCAATCTTCCTGGCCTCCTAGGAGAATAGACTACAC
CTGCATGTTCGTTCAGTGGACGAACAGCAAAGTAAATACCAGATGTCTTG
CTTGTTGCACATACAAGACATATGTCCATG
back to top

Coding sequence (CDS) from alignment at KZ851899.1:230482..232361+

>M747DRAFT_855-T1 ID=M747DRAFT_855-T1|Name=M747DRAFT_855-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1485bp|location=Sequence derived from alignment at KZ851899.1:230482..232361+ (Aspergillus niger ATCC 13496)
ATGCCACCTCCCCTCCCCTCCCACCATCGCGGCATGACCGCAAACCCCGT
CCGACCAAGCAGATACCGACCCGGCAAAGCCATCGCAGAGGAGCCCTCCT
CGTCCGAAGAAGAGGATGAAGATGAACAAGAAGCTAAAAAGGAAGCCGAG
CGACAGAGACAGCAGGAACGGCGCAGACTCGAACAACAGCGACGACAAGC
TCCCAAGGCGAGCTCGTTTCCTGCGGGTGCGGCGAAGATTGCTCGGGGTG
TGAAGGATGTGAAAATCGAGGAGGAAGAAGCAGATGAGGATGAAGAGGGG
TTTGTGACGGAGGAGGAGGAGGAAGAAGAAGAGGCCAAGCCTGCGAAGGC
GGCTGCTCCTGTTGCTGGCGACAGGGTGGCTGCTCCGGCGCGGACGGCTA
CGGTGAAGGAGATATCGGAAGAAGAGGAGGAGGATGAAGAGGAAGAGGAA
GAGAGTTCTGAAGAAGAAAGCAGTTCCGAAGACGAGGCTCCGCGCAGAGT
GCTTTTACGACCTACGTTCATCAAGAAAGACAAGCGCAACAACGCCCCCG
GTCAAACACAGAACGGCCAAGCTGCGTCAGGCACAGTGGTGGATACTTCA
GCCGAGACAGAGGCGCGTCGGATACAGCGACAGGAGAAAGCAGACGCCTT
GATTCGGGAACAACTAGAGAAAGACGCCATTGCGCGGAGCGAGGCGAATC
GGGCGTGGGATGACGACGAGCTCGAGGTGGGCGAAGAAGGTGCAATTGAC
GATACCGACGGAAAGGATCCAGAAGCGGAGTACGCAGCATGGAAGCTCCG
AGAGCTGAAGCGCATCAAGCGCGAGCGTGAAGCGATCGAGGCTGCAGAGA
AGGAGCGAGAAGAAGTCGAGCGGCGCAGGAATCTCACTGCCGAGGAGCGC
GATCGCGAAGACCGCGAATACCTCGCCAAGCAGGAGGAAGAGAAGGAGGC
TAATCGCGGCCAGGCCGGGTACATGCAGCGATACTTCCATAAGGGAGCGT
TTTTCAGCGAAGACATGCAGCGCGAGGGACTTGCTCAGAGGAATATCATG
GGTGCGAAGTTTGCGGACGATGTCTCGCGGGAGACTCTGCCCCAGTACAT
GCAGATCCGTGATATGACGAAGCTTGGAAAGAAGGGACGCACGCGCTATA
GGGATCTGAAATCAGAGGACACAGGTCGTTTTGGCGAAGGGTTCCAGAAC
AGGTCTCGTCATCGCGATGGTGGAGCTCCCATTGGCATTACCGACGAGCG
ATTCATGCCTGATCGTGACCGTGATGAAAGACCCAAGGGACCCACTGGGG
CGAATGCCTCTGCTGTGCGCGAGAGACGGAGGTCTAGGTCACGATCATAC
TCGCCGCGACGAGAGCGTCGCGATCGTTCAGCAGACCGGTATAGGCCCGA
TACAAGCAGTCGCAGGAAACGGAGCCCGTCACCTTACGAAGATCGGGAGA
AACGGAGGCGCGTGAGTGTTTCGCCAGAACGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_855M747DRAFT_855Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_855-T1.utr5p1M747DRAFT_855-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_855-T1.exon1M747DRAFT_855-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_855-T1.cdsM747DRAFT_855-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_855-T1.utr3p1M747DRAFT_855-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_855-T1M747DRAFT_855-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009730
DBxrefPFAM:PF06991
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:230482..232361 +
Powered by Drupal