You are here

Home

M747DRAFT_87560-T1, M747DRAFT_87560-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_87560-T1
Unique NameM747DRAFT_87560-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:168124..168600+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_87560-T1 ID=M747DRAFT_87560-T1|Name=M747DRAFT_87560-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=477bp|location=Sequence derived from alignment at KZ851901.1:168124..168600+ (Aspergillus niger ATCC 13496)
CTCCCGATTTGAGACAAACAACAGCATCAAAAGTGGCAGTGCGGGCTGCA
AAGAAAGGAGAAGCGAGTCCAAATGGTAGGGGCGAAGGTCAAAGGAGAGT
CACTCATTCGAAGCCCCCCAAAAAGGCGGGGATGCGGCGGCTCCCTTTAA
TCGTCCAATCACAAGTCCCCGCTTGTCATCCCGGCGTCATCCAGCTCCAG
ACTAGAAATCTCCTAGTCTCGTTCAACATCCACTCAATCGTTCTATACAC
TCCTTACGCTATCGAATCGACCAAGATCATCTGCTTCTCACCGGTCTACA
GCTATGCAGGTACCCCTCTGCAACACCCACACCTGTGGTGGTCCCGGCGG
CCGAGATACGGCCGGCCGTCCCTGAGACTGGCCGGAGTGACATCATCCAG
TCAGCATTCACTAACTATGGATACAGTCCCCACTTTGATGGTCTGACACT
TTTGACAATCATGTCAAGTCTCCCAGC
back to top

Coding sequence (CDS) from alignment at KZ851901.1:168124..168600+

>M747DRAFT_87560-T1 ID=M747DRAFT_87560-T1|Name=M747DRAFT_87560-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=372bp|location=Sequence derived from alignment at KZ851901.1:168124..168600+ (Aspergillus niger ATCC 13496)
ATGCGGCGGCTCCCTTTAATCGTCCAATCACAAGTCCCCGCTTGTCATCC
CGGCGTCATCCAGCTCCAGACTAGAAATCTCCTAGTCTCGTTCAACATCC
ACTCAATCGTTCTATACACTCCTTACGCTATCGAATCGACCAAGATCATC
TGCTTCTCACCGGTCTACAGCTATTCCCCACTTTGAATGCGGCGGCTCCC
TTTAATCGTCCAATCACAAGTCCCCGCTTGTCATCCCGGCGTCATCCAGC
TCCAGACTAGAAATCTCCTAGTCTCGTTCAACATCCACTCAATCGTTCTA
TACACTCCTTACGCTATCGAATCGACCAAGATCATCTGCTTCTCACCGGT
CTACAGCTATTCCCCACTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_87560M747DRAFT_87560Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87560-T1.utr5p1M747DRAFT_87560-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87560-T1.exon1M747DRAFT_87560-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_87560-T1.exon2M747DRAFT_87560-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87560-T1.cdsM747DRAFT_87560-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87560-T1.utr3p1M747DRAFT_87560-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_87560-T1M747DRAFT_87560-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:168124..168600 +
Powered by Drupal