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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:24270..25634- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000008-T1 ID=CBS51388_000008-T1|Name=CBS51388_000008-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1365bp|location=Sequence derived from alignment at An01:24270..25634- (Aspergillus niger CBS 513.88)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCGTATGGCA
CCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAAT
TCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGG
TCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTC
TCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCG
ATTTGTGACCTTTGTATATCCCTTTGGATATTTAAGGTTCATCAGATGCA
AAGTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGAGTTCATG
ACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGC
CAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCC
GTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGAC
TACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTG
GAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTA
ACCCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGAAGTATCG
GAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTG
TACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGT
TCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCA
TTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAG
CTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGT
CAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAGACTGGTC
GCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAG
ATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGC
CGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCG
AGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAG
CTGTTGCGCCTGTAA back to topCoding sequence (CDS) from alignment at An01:24270..25634- >CBS51388_000008-T1 ID=CBS51388_000008-T1|Name=CBS51388_000008-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4500bp|location=Sequence derived from alignment at An01:24270..25634- (Aspergillus niger CBS 513.88)
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR009014 |
| DBxref | InterPro:IPR033248 |
| DBxref | InterPro:IPR005475 |
| DBxref | PFAM:PF02779 |
| DBxref | PFAM:PF02780 |
| Product | beta subunit |
| Product | pyruvate dehydrogenase E1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:24270..25634 - |
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