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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:831046..832016+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000298-T1 ID=CBS51388_000298-T1|Name=CBS51388_000298-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=971bp|location=Sequence derived from alignment at An01:831046..832016+ (Aspergillus niger CBS 513.88)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGGTGAGAATTCCCC
CCTATATTGCGATCACTTAACATCCCGCCGGGTGCTCGTGTAGTTTGCCA
TAGGATGCCCTTCTTGAAATGAGAAATGGTGTTACTGGGCGGCTCGAAAC
GAACTTTTTCTTTCGCCGGCGGATGGATGTGGCACAAACAGAGAGACTTG
AGAGAAGCCTCATGTGTCTTGCTATACACTCGTTGAACTTTGCTGAGAGT
GCATCAATATAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCC
TTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCT
ATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCT
CCTAAGGGTGCCACCTACGGTATGTACAATTTTCGTCTTTGAGGGATTGG
AACCCAATCTAATTTGTTTGCGACTACAGGCAAGCCCACCAACATGGGTA
TCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGT
GTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAA
CCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGC
ACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTC
CACAAGGTTCGTTATGAATGCCATTGGGGATTATATGTTCTCATTGATTA
CACGTTACTGACCGGGAATGTGTTTCATAGCACCGCGAGGCCCGTGGTCT
TACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACA
ACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAG
AGCTACTGGCGTTACCGTTAA back to topCoding sequence (CDS) from alignment at An01:831046..832016+ >CBS51388_000298-T1 ID=CBS51388_000298-T1|Name=CBS51388_000298-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2448bp|location=Sequence derived from alignment at An01:831046..832016+ (Aspergillus niger CBS 513.88)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGA
ACGCTATCCACCGTGCTTCCCGCCCTTCTCGCCCCGACAAGGCTCGTCGT
CTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAG
ACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGC
CCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCT
ACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAA
CTCCTACTGGATCAACCAGGACTCCACCTACAAGTACTTCGAGGTCATCC
TCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGCATCAACTGG
ATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCAC
CGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACACCC
GCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTACTGG
CGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAA
GAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGC
TCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCTTCTCGCCCCGAC
AAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCG
TATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCA
CCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGC
GCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCT
GCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTACT
TCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCT
CGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCGCGAGGCCCGTGG
TCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCT
ACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACC
CAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAAGTACGTGGAAGA
GATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCC
GTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCT
TCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTA
TGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTC
CTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGTATCAACCAGCTC
AAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCG
CTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCA
CCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATC
CGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCACAAGCACCG
CGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACA
AGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAG
CGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAAATGGGTGCCCTCAA
GTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCC
TGCTGCGTGTCCGTTGCTGGGAGCTCCGTCAACTGAACGCTATCCACCGT
GCTTCCCGCCCTTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGC
CAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTA
AGAGACCCGCTCCTAAGGGTGCCACCTACGGCAAGCCCACCAACATGGGT
ATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCG
TGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCA
ACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAG
CACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGT
CCACAAGCACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCC
GTGGTATCAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGC
CACACCTGGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264L0C |
| DBxref | InterPro:IPR012678 |
| DBxref | InterPro:IPR020925 |
| DBxref | InterPro:IPR024794 |
| DBxref | InterPro:IPR000439 |
| DBxref | PFAM:PF00827 |
| Product | 60S ribosomal protein L15 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:831046..832016 + |
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