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CBS51388_000341-T1, CBS51388_000341-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000341-T1
Unique NameCBS51388_000341-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:952476..953607+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000341-T1 ID=CBS51388_000341-T1|Name=CBS51388_000341-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1132bp|location=Sequence derived from alignment at An01:952476..953607+ (Aspergillus niger CBS 513.88)
ATGTGGCTCATTAACTGGTGTAGGTAGTCTCCTGTTTTGCCATCCGCCGA
CTTGGCCCCGATCAGGTGGTCTGCAGACCTGCCCTGCACGCTCTTGGATC
CATTGGATCCTCATCGTTTCTCTTCTGTTCACAGTGTCTCTCGTATGCCA
ATTTACTGATTTATCTTTTCCGAATAGTCTACGATCTCCTGGCCTCCCTT
GGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGC
CGGAAAGACGACCCTCCTGCACATGCTGAAGGTATGTGAGCTTCCTTTAG
TCGCAGGCAAGCTCTGCTTTGATGGCAACAATGGTGGATATGGTATCGCC
TGGGATCGACTCCGATCGCAAGGGAATGCCACCACGGCAGGGATAGAGCC
GCGAGAGATGTGGACGATAAGCTAACATCTGTGTTTGATAATAGAACGAC
CGGGTTGCCATCCTCCAGCCCACTGCTCACCCGAGTACGTATCACCCGCA
CGAACATGCCAGCGAGGGACTATTCGACAGCGACCGAGGAGAATCGATTT
TCATGAACATGGGCTAACCGCACTCCTTGAATACAGCATCCGAAGAACTC
GCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCA
GGGTGAGTAACACACCTCGTAGCCCCGTGGTATAGATCGAAACAAGAAAA
CTAAATGTAGCAATTCTTGTTAAATAGCTCGTCGTCTGTGGAAGGACTAC
TTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGA
GCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGG
AGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCG
GATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGAC
CACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGT
TCATGTGCAGTGTTGTCATGAGACAGGGTGAGTGGGATTTTTCATATCCA
AACCAATGTCGACCAGGAGCTAATCGTTCTGTGCCTTGTAGGATACGGTG
AAGGTATCAGATGGCTGTCTCAATACGTCTAA
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Coding sequence (CDS) from alignment at An01:952476..953607+

>CBS51388_000341-T1 ID=CBS51388_000341-T1|Name=CBS51388_000341-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3420bp|location=Sequence derived from alignment at An01:952476..953607+ (Aspergillus niger CBS 513.88)
ATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCT
CAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGA
CGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCC
ACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCAC
GACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACT
ACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCAC
GAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGA
GGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACC
CGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAG
ACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGT
GTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGAT
GGCTGTCTCAATACGTCTAAATGTGGCTCATTAACTGGTTCTACGATCTC
CTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGG
TCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAAGAACGACC
GGGTTGCCATCCTCCAGCCCACTGCTCACCCGACATCCGAAGAACTCGCC
ATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGC
TCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCC
TCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTC
GACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCT
CGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCC
ACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAG
GGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGG
ATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAAATGTGGCTCA
TTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCAC
GCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCT
GCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACC
CGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGAC
CTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCCGA
AGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCC
CCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCT
AAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGT
TAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTA
AGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGC
AGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCTCA
ATACGTCTAAATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCC
TTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAAT
GCCGGAAAGACGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCAT
CCTCCAGCCCACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACA
ACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTG
TGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGC
CAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCC
TTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAG
ATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGG
ATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGC
CCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAA
GGTATCAGATGGCTGTCTCAATACGTCTAAATGTGGCTCATTAACTGGTT
CTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCC
TGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTG
AAGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGACATCCGA
AGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTC
ACCAGCAGGCTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGT
ATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAA
GGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTT
TCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGAT
GAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGT
TCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCA
TGAGACAGGGATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAA
ATGTGGCTCATTAACTGGTTCTACGATCTCCTGGCCTCCCTTGGCCTGCT
CAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGA
CGACCCTCCTGCACATGCTGAAGAACGACCGGGTTGCCATCCTCCAGCCC
ACTGCTCACCCGACATCCGAAGAACTCGCCATCGGCAACAACCGCTTCAC
GACCTTCGACCTGGGTGGTCACCAGCAGGCTCGTCGTCTGTGGAAGGACT
ACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCAC
GAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGA
GGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACC
CGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAG
ACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGT
GTTCATGTGCAGTGTTGTCATGAGACAGGGATACGGTGAAGGTATCAGAT
GGCTGTCTCAATACGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SAR1CBS51388_000341Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000341-T1CBS51388_000341-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000341-T1.exon1CBS51388_000341-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000341-T1.exon2CBS51388_000341-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000341-T1.exon3CBS51388_000341-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000341-T1.exon4CBS51388_000341-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000341-T1.exon5CBS51388_000341-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_000341-T1.exon6CBS51388_000341-T1.exon6Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000341-T1.cdsCBS51388_000341-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006687
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductCOPII coat GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:952476..953607 +
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