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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1270974..1273207- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000425-T1 ID=CBS51388_000425-T1|Name=CBS51388_000425-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2234bp|location=Sequence derived from alignment at An01:1270974..1273207- (Aspergillus niger CBS 513.88)
ATGGCATCACGCCCGATCGTACTGAGGTTCGAAAGCCGCAACGGCCAGTT
CCGGTTGACGGTCAACCCGCAAGACCTATTCCCGTCTCTGCAGCCACAGG
TGTGTATCCCATGCCTCATGGCATAGCACTGGAAAGCTCGAACGAGTGCT
TATATTGCTCTTCTAGATCCTAGAGCGTCTCCCTCCGAACGTCGATCCCT
CTTCCATCACCCTCTCCAACCGCCCCATCGGCACCGGTGGTGAGGAGAGA
CTCCTCAACAGCTTAGATGGCGTGGGTTTCGACAAAGTTGGTCTCAAGTG
AGTCGAGGCCTGCATGTTAATAGATTAGGCGCCGATCTAGGTTACCTGTC
ACAGCCACTAACACTACTCGGTTCCTTCCTGTCAGGCACGGCGATAAGCT
CTTCATCGGGTATCAAGAAAACCAAGGACAGCAGAATGGCACAGCCAACG
GCCATATAACCCCCAGCGCAGGTGACGCTTCGCGACGTCTAAATGGAGCT
CCTGTGCCCCAAAGCGAAACAGTAACCTTCCGCCCCCCACAACCGACCTC
ACCCACAGCCACAATCAAGAACCCTTGGGACGTGGTGCAGCAATCGCCGC
TAGATGATATGTTGGATAAGAAGGATGGGAAGATAAAGCGAGGCCTCGAT
ACGAAGTTCTGCCGACACGGGCCCAAGGGAATGTGCGACTACTGCATGCC
GCTCGAGCCTTACGACCCCAAGTATTTGGCGGAGAAGAAGATCAAGCACC
TCTCGTTTCATTCGTATCTGCGGAAAATCAACGCCTCTACCAACAAAGCC
GAACTCAACAGCTCGTTCATGCCCCCGCTCAGTGAGCCGTATTACCGAGT
ACGGCGAGACTGTCCCTCTGGACACCCGCAGTGGCCGGAGGGTATTTGCA
CCAAGTGCCAGCCGAGCGCGATCAGTCTGCAGCCGCAAGAGTTCCGGATG
GTGGACCATGTGGAGTTCTCCTCGCCGGATCTCATTAATTCGTTGCTCGA
CTTTTGGCGGAAGTCGGGCGCTCAGCGGTTAGGGTTTCTCTACGGTACCT
ATGAGGAGTATAAGGAGGTTCCGCTGGGCGTAAAGGCCGTGGTCCAGGCC
ATCTATGAGCCACCACAAGTGGATGAGGTGGATGGAGTTACGCTCCATGA
ATGGCCCAACGAGAAGGAGGTGGACGAGGTCGCACATCTCTGTGGTTTGG
AGAGGATTGGCGTGATCTTTACCGACCTACTGGACGCGGGTCGTGGAGAC
GGTTCGGTAATTTGCAAACGACACATCGACTCCTACTATCTGTCCTCCTT
AGAGATCGCTTTTGCAGCGCGGATGCAAGCGCAACACCCCAAGGCCACGA
AATGGAGCCGGACAGGCCGCTTCGGCTCGAATTTTGTCACCTGTGTGCTG
AGTGGCGACGAGGAGGGCGCCATTTCAGTCAGTGCTTACCAGGCGTCAGT
AGCCGCCGTTGAGATGGTCCGCGCGGACATTGTCGAACCATCGGCGGAAC
CCTCGGTCATGCTGGTGCAATCCGAGGACGACGACACCGAGAACAAGTCG
CGGTATATCCCCGAGGTCTTCTATCGCAAGATCAACGAGTACGGCGTCAG
CGCTCAGCAGAACGCCAAACCCAGCTTCCCCGTTGAGTACCTCCTGGTCA
CCTTGACACACGGTTTCCCAACGGACGCCTCTCCTCTATTCACCGACAGC
AGCTTCCCCATCGAGAACCGCGAAGTCATCGGCGAGAGCCAGGAGCTCGT
CCACGTGGCGAAGAAGCTAGTGACCCACGGCGACCCGGACAAAGCGATCC
AAGCCGTCTCGGACTTCCATATGCTGTGCTTCCTGCATTCCCTGTCGACA
TTCAACAAGGTAAACCCTCATTGCCTACATGACTTTCTTCCATTCAGGAA
CAAACCCTCCTAACCAAACCCACCCACCTTCTCACAGGACGAAGAAGCAC
TACTCTGCCGCGTCGCGACGCAACGTGCCCCCGCAGATGGCCTGCAGCTG
ATCAACACCCCTGGATGGGCTACCCTGGTGACCATTCTTCAGGAAAGTGG
TGAGCGCCCCCCTAAGCGCCCCTGGCTGCCCACACCCGAGCCTTACCCGC
CACGTTCAGTGCCCTACAACCCCGGAAAACGTTCCCTCCCCTCCTCCTCT
TCCTCCTCTCATCTCAGGCCCGAGTCTCCCAAATCTGAAAGTGAACGTCT
TGCTAAGAGGTTTAAGGGAGCTAGTCTAGAATGA back to topCoding sequence (CDS) from alignment at An01:1270974..1273207- >CBS51388_000425-T1 ID=CBS51388_000425-T1|Name=CBS51388_000425-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8004bp|location=Sequence derived from alignment at An01:1270974..1273207- (Aspergillus niger CBS 513.88)
GACGAAGAAGCACTACTCTGCCGCGTCGCGACGCAACGTGCCCCCGCAGA
TGGCCTGCAGCTGATCAACACCCCTGGATGGGCTACCCTGGTGACCATTC
TTCAGGAAAGTGGTGAGCGCCCCCCTAAGCGCCCCTGGCTGCCCACACCC
GAGCCTTACCCGCCACGTTCAGTGCCCTACAACCCCGGAAAACGTTCCCT
CCCCTCCTCCTCTTCCTCCTCTCATCTCAGGCCCGAGTCTCCCAAATCTG
AAAGTGAACGTCTTGCTAAGAGGTTTAAGGGAGCTAGTCTAGAATGAGCA
CGGCGATAAGCTCTTCATCGGGTATCAAGAAAACCAAGGACAGCAGAATG
GCACAGCCAACGGCCATATAACCCCCAGCGCAGGTGACGCTTCGCGACGT
CTAAATGGAGCTCCTGTGCCCCAAAGCGAAACAGTAACCTTCCGCCCCCC
ACAACCGACCTCACCCACAGCCACAATCAAGAACCCTTGGGACGTGGTGC
AGCAATCGCCGCTAGATGATATGTTGGATAAGAAGGATGGGAAGATAAAG
CGAGGCCTCGATACGAAGTTCTGCCGACACGGGCCCAAGGGAATGTGCGA
CTACTGCATGCCGCTCGAGCCTTACGACCCCAAGTATTTGGCGGAGAAGA
AGATCAAGCACCTCTCGTTTCATTCGTATCTGCGGAAAATCAACGCCTCT
ACCAACAAAGCCGAACTCAACAGCTCGTTCATGCCCCCGCTCAGTGAGCC
GTATTACCGAGTACGGCGAGACTGTCCCTCTGGACACCCGCAGTGGCCGG
AGGGTATTTGCACCAAGTGCCAGCCGAGCGCGATCAGTCTGCAGCCGCAA
GAGTTCCGGATGGTGGACCATGTGGAGTTCTCCTCGCCGGATCTCATTAA
TTCGTTGCTCGACTTTTGGCGGAAGTCGGGCGCTCAGCGGTTAGGGTTTC
TCTACGGTACCTATGAGGAGTATAAGGAGGTTCCGCTGGGCGTAAAGGCC
GTGGTCCAGGCCATCTATGAGCCACCACAAGTGGATGAGGTGGATGGAGT
TACGCTCCATGAATGGCCCAACGAGAAGGAGGTGGACGAGGTCGCACATC
TCTGTGGTTTGGAGAGGATTGGCGTGATCTTTACCGACCTACTGGACGCG
GGTCGTGGAGACGGTTCGGTAATTTGCAAACGACACATCGACTCCTACTA
TCTGTCCTCCTTAGAGATCGCTTTTGCAGCGCGGATGCAAGCGCAACACC
CCAAGGCCACGAAATGGAGCCGGACAGGCCGCTTCGGCTCGAATTTTGTC
ACCTGTGTGCTGAGTGGCGACGAGGAGGGCGCCATTTCAGTCAGTGCTTA
CCAGGCGTCAGTAGCCGCCGTTGAGATGGTCCGCGCGGACATTGTCGAAC
CATCGGCGGAACCCTCGGTCATGCTGGTGCAATCCGAGGACGACGACACC
GAGAACAAGTCGCGGTATATCCCCGAGGTCTTCTATCGCAAGATCAACGA
GTACGGCGTCAGCGCTCAGCAGAACGCCAAACCCAGCTTCCCCGTTGAGT
ACCTCCTGGTCACCTTGACACACGGTTTCCCAACGGACGCCTCTCCTCTA
TTCACCGACAGCAGCTTCCCCATCGAGAACCGCGAAGTCATCGGCGAGAG
CCAGGAGCTCGTCCACGTGGCGAAGAAGCTAGTGACCCACGGCGACCCGG
ACAAAGCGATCCAAGCCGTCTCGGACTTCCATATGCTGTGCTTCCTGCAT
TCCCTGTCGACATTCAACAAGATCCTAGAGCGTCTCCCTCCGAACGTCGA
TCCCTCTTCCATCACCCTCTCCAACCGCCCCATCGGCACCGGTGGTGAGG
AGAGACTCCTCAACAGCTTAGATGGCGTGGGTTTCGACAAAGTTGGTCTC
AAATGGCATCACGCCCGATCGTACTGAGGTTCGAAAGCCGCAACGGCCAG
TTCCGGTTGACGGTCAACCCGCAAGACCTATTCCCGTCTCTGCAGCCACA
GGACGAAGAAGCACTACTCTGCCGCGTCGCGACGCAACGTGCCCCCGCAG
ATGGCCTGCAGCTGATCAACACCCCTGGATGGGCTACCCTGGTGACCATT
CTTCAGGAAAGTGGTGAGCGCCCCCCTAAGCGCCCCTGGCTGCCCACACC
CGAGCCTTACCCGCCACGTTCAGTGCCCTACAACCCCGGAAAACGTTCCC
TCCCCTCCTCCTCTTCCTCCTCTCATCTCAGGCCCGAGTCTCCCAAATCT
GAAAGTGAACGTCTTGCTAAGAGGTTTAAGGGAGCTAGTCTAGAATGAGC
ACGGCGATAAGCTCTTCATCGGGTATCAAGAAAACCAAGGACAGCAGAAT
GGCACAGCCAACGGCCATATAACCCCCAGCGCAGGTGACGCTTCGCGACG
TCTAAATGGAGCTCCTGTGCCCCAAAGCGAAACAGTAACCTTCCGCCCCC
CACAACCGACCTCACCCACAGCCACAATCAAGAACCCTTGGGACGTGGTG
CAGCAATCGCCGCTAGATGATATGTTGGATAAGAAGGATGGGAAGATAAA
GCGAGGCCTCGATACGAAGTTCTGCCGACACGGGCCCAAGGGAATGTGCG
ACTACTGCATGCCGCTCGAGCCTTACGACCCCAAGTATTTGGCGGAGAAG
AAGATCAAGCACCTCTCGTTTCATTCGTATCTGCGGAAAATCAACGCCTC
TACCAACAAAGCCGAACTCAACAGCTCGTTCATGCCCCCGCTCAGTGAGC
CGTATTACCGAGTACGGCGAGACTGTCCCTCTGGACACCCGCAGTGGCCG
GAGGGTATTTGCACCAAGTGCCAGCCGAGCGCGATCAGTCTGCAGCCGCA
AGAGTTCCGGATGGTGGACCATGTGGAGTTCTCCTCGCCGGATCTCATTA
ATTCGTTGCTCGACTTTTGGCGGAAGTCGGGCGCTCAGCGGTTAGGGTTT
CTCTACGGTACCTATGAGGAGTATAAGGAGGTTCCGCTGGGCGTAAAGGC
CGTGGTCCAGGCCATCTATGAGCCACCACAAGTGGATGAGGTGGATGGAG
TTACGCTCCATGAATGGCCCAACGAGAAGGAGGTGGACGAGGTCGCACAT
CTCTGTGGTTTGGAGAGGATTGGCGTGATCTTTACCGACCTACTGGACGC
GGGTCGTGGAGACGGTTCGGTAATTTGCAAACGACACATCGACTCCTACT
ATCTGTCCTCCTTAGAGATCGCTTTTGCAGCGCGGATGCAAGCGCAACAC
CCCAAGGCCACGAAATGGAGCCGGACAGGCCGCTTCGGCTCGAATTTTGT
CACCTGTGTGCTGAGTGGCGACGAGGAGGGCGCCATTTCAGTCAGTGCTT
ACCAGGCGTCAGTAGCCGCCGTTGAGATGGTCCGCGCGGACATTGTCGAA
CCATCGGCGGAACCCTCGGTCATGCTGGTGCAATCCGAGGACGACGACAC
CGAGAACAAGTCGCGGTATATCCCCGAGGTCTTCTATCGCAAGATCAACG
AGTACGGCGTCAGCGCTCAGCAGAACGCCAAACCCAGCTTCCCCGTTGAG
TACCTCCTGGTCACCTTGACACACGGTTTCCCAACGGACGCCTCTCCTCT
ATTCACCGACAGCAGCTTCCCCATCGAGAACCGCGAAGTCATCGGCGAGA
GCCAGGAGCTCGTCCACGTGGCGAAGAAGCTAGTGACCCACGGCGACCCG
GACAAAGCGATCCAAGCCGTCTCGGACTTCCATATGCTGTGCTTCCTGCA
TTCCCTGTCGACATTCAACAAGATCCTAGAGCGTCTCCCTCCGAACGTCG
ATCCCTCTTCCATCACCCTCTCCAACCGCCCCATCGGCACCGGTGGTGAG
GAGAGACTCCTCAACAGCTTAGATGGCGTGGGTTTCGACAAAGTTGGTCT
CAAATGGCATCACGCCCGATCGTACTGAGGTTCGAAAGCCGCAACGGCCA
GTTCCGGTTGACGGTCAACCCGCAAGACCTATTCCCGTCTCTGCAGCCAC
AGGACGAAGAAGCACTACTCTGCCGCGTCGCGACGCAACGTGCCCCCGCA
GATGGCCTGCAGCTGATCAACACCCCTGGATGGGCTACCCTGGTGACCAT
TCTTCAGGAAAGTGGTGAGCGCCCCCCTAAGCGCCCCTGGCTGCCCACAC
CCGAGCCTTACCCGCCACGTTCAGTGCCCTACAACCCCGGAAAACGTTCC
CTCCCCTCCTCCTCTTCCTCCTCTCATCTCAGGCCCGAGTCTCCCAAATC
TGAAAGTGAACGTCTTGCTAAGAGGTTTAAGGGAGCTAGTCTAGAATGAG
CACGGCGATAAGCTCTTCATCGGGTATCAAGAAAACCAAGGACAGCAGAA
TGGCACAGCCAACGGCCATATAACCCCCAGCGCAGGTGACGCTTCGCGAC
GTCTAAATGGAGCTCCTGTGCCCCAAAGCGAAACAGTAACCTTCCGCCCC
CCACAACCGACCTCACCCACAGCCACAATCAAGAACCCTTGGGACGTGGT
GCAGCAATCGCCGCTAGATGATATGTTGGATAAGAAGGATGGGAAGATAA
AGCGAGGCCTCGATACGAAGTTCTGCCGACACGGGCCCAAGGGAATGTGC
GACTACTGCATGCCGCTCGAGCCTTACGACCCCAAGTATTTGGCGGAGAA
GAAGATCAAGCACCTCTCGTTTCATTCGTATCTGCGGAAAATCAACGCCT
CTACCAACAAAGCCGAACTCAACAGCTCGTTCATGCCCCCGCTCAGTGAG
CCGTATTACCGAGTACGGCGAGACTGTCCCTCTGGACACCCGCAGTGGCC
GGAGGGTATTTGCACCAAGTGCCAGCCGAGCGCGATCAGTCTGCAGCCGC
AAGAGTTCCGGATGGTGGACCATGTGGAGTTCTCCTCGCCGGATCTCATT
AATTCGTTGCTCGACTTTTGGCGGAAGTCGGGCGCTCAGCGGTTAGGGTT
TCTCTACGGTACCTATGAGGAGTATAAGGAGGTTCCGCTGGGCGTAAAGG
CCGTGGTCCAGGCCATCTATGAGCCACCACAAGTGGATGAGGTGGATGGA
GTTACGCTCCATGAATGGCCCAACGAGAAGGAGGTGGACGAGGTCGCACA
TCTCTGTGGTTTGGAGAGGATTGGCGTGATCTTTACCGACCTACTGGACG
CGGGTCGTGGAGACGGTTCGGTAATTTGCAAACGACACATCGACTCCTAC
TATCTGTCCTCCTTAGAGATCGCTTTTGCAGCGCGGATGCAAGCGCAACA
CCCCAAGGCCACGAAATGGAGCCGGACAGGCCGCTTCGGCTCGAATTTTG
TCACCTGTGTGCTGAGTGGCGACGAGGAGGGCGCCATTTCAGTCAGTGCT
TACCAGGCGTCAGTAGCCGCCGTTGAGATGGTCCGCGCGGACATTGTCGA
ACCATCGGCGGAACCCTCGGTCATGCTGGTGCAATCCGAGGACGACGACA
CCGAGAACAAGTCGCGGTATATCCCCGAGGTCTTCTATCGCAAGATCAAC
GAGTACGGCGTCAGCGCTCAGCAGAACGCCAAACCCAGCTTCCCCGTTGA
GTACCTCCTGGTCACCTTGACACACGGTTTCCCAACGGACGCCTCTCCTC
TATTCACCGACAGCAGCTTCCCCATCGAGAACCGCGAAGTCATCGGCGAG
AGCCAGGAGCTCGTCCACGTGGCGAAGAAGCTAGTGACCCACGGCGACCC
GGACAAAGCGATCCAAGCCGTCTCGGACTTCCATATGCTGTGCTTCCTGC
ATTCCCTGTCGACATTCAACAAGATCCTAGAGCGTCTCCCTCCGAACGTC
GATCCCTCTTCCATCACCCTCTCCAACCGCCCCATCGGCACCGGTGGTGA
GGAGAGACTCCTCAACAGCTTAGATGGCGTGGGTTTCGACAAAGTTGGTC
TCAAATGGCATCACGCCCGATCGTACTGAGGTTCGAAAGCCGCAACGGCC
AGTTCCGGTTGACGGTCAACCCGCAAGACCTATTCCCGTCTCTGCAGCCA
CAGGACGAAGAAGCACTACTCTGCCGCGTCGCGACGCAACGTGCCCCCGC
AGATGGCCTGCAGCTGATCAACACCCCTGGATGGGCTACCCTGGTGACCA
TTCTTCAGGAAAGTGGTGAGCGCCCCCCTAAGCGCCCCTGGCTGCCCACA
CCCGAGCCTTACCCGCCACGTTCAGTGCCCTACAACCCCGGAAAACGTTC
CCTCCCCTCCTCCTCTTCCTCCTCTCATCTCAGGCCCGAGTCTCCCAAAT
CTGAAAGTGAACGTCTTGCTAAGAGGTTTAAGGGAGCTAGTCTAGAATGA
GCACGGCGATAAGCTCTTCATCGGGTATCAAGAAAACCAAGGACAGCAGA
ATGGCACAGCCAACGGCCATATAACCCCCAGCGCAGGTGACGCTTCGCGA
CGTCTAAATGGAGCTCCTGTGCCCCAAAGCGAAACAGTAACCTTCCGCCC
CCCACAACCGACCTCACCCACAGCCACAATCAAGAACCCTTGGGACGTGG
TGCAGCAATCGCCGCTAGATGATATGTTGGATAAGAAGGATGGGAAGATA
AAGCGAGGCCTCGATACGAAGTTCTGCCGACACGGGCCCAAGGGAATGTG
CGACTACTGCATGCCGCTCGAGCCTTACGACCCCAAGTATTTGGCGGAGA
AGAAGATCAAGCACCTCTCGTTTCATTCGTATCTGCGGAAAATCAACGCC
TCTACCAACAAAGCCGAACTCAACAGCTCGTTCATGCCCCCGCTCAGTGA
GCCGTATTACCGAGTACGGCGAGACTGTCCCTCTGGACACCCGCAGTGGC
CGGAGGGTATTTGCACCAAGTGCCAGCCGAGCGCGATCAGTCTGCAGCCG
CAAGAGTTCCGGATGGTGGACCATGTGGAGTTCTCCTCGCCGGATCTCAT
TAATTCGTTGCTCGACTTTTGGCGGAAGTCGGGCGCTCAGCGGTTAGGGT
TTCTCTACGGTACCTATGAGGAGTATAAGGAGGTTCCGCTGGGCGTAAAG
GCCGTGGTCCAGGCCATCTATGAGCCACCACAAGTGGATGAGGTGGATGG
AGTTACGCTCCATGAATGGCCCAACGAGAAGGAGGTGGACGAGGTCGCAC
ATCTCTGTGGTTTGGAGAGGATTGGCGTGATCTTTACCGACCTACTGGAC
GCGGGTCGTGGAGACGGTTCGGTAATTTGCAAACGACACATCGACTCCTA
CTATCTGTCCTCCTTAGAGATCGCTTTTGCAGCGCGGATGCAAGCGCAAC
ACCCCAAGGCCACGAAATGGAGCCGGACAGGCCGCTTCGGCTCGAATTTT
GTCACCTGTGTGCTGAGTGGCGACGAGGAGGGCGCCATTTCAGTCAGTGC
TTACCAGGCGTCAGTAGCCGCCGTTGAGATGGTCCGCGCGGACATTGTCG
AACCATCGGCGGAACCCTCGGTCATGCTGGTGCAATCCGAGGACGACGAC
ACCGAGAACAAGTCGCGGTATATCCCCGAGGTCTTCTATCGCAAGATCAA
CGAGTACGGCGTCAGCGCTCAGCAGAACGCCAAACCCAGCTTCCCCGTTG
AGTACCTCCTGGTCACCTTGACACACGGTTTCCCAACGGACGCCTCTCCT
CTATTCACCGACAGCAGCTTCCCCATCGAGAACCGCGAAGTCATCGGCGA
GAGCCAGGAGCTCGTCCACGTGGCGAAGAAGCTAGTGACCCACGGCGACC
CGGACAAAGCGATCCAAGCCGTCTCGGACTTCCATATGCTGTGCTTCCTG
CATTCCCTGTCGACATTCAACAAGATCCTAGAGCGTCTCCCTCCGAACGT
CGATCCCTCTTCCATCACCCTCTCCAACCGCCCCATCGGCACCGGTGGTG
AGGAGAGACTCCTCAACAGCTTAGATGGCGTGGGTTTCGACAAAGTTGGT
CTCAAATGGCATCACGCCCGATCGTACTGAGGTTCGAAAGCCGCAACGGC
CAGTTCCGGTTGACGGTCAACCCGCAAGACCTATTCCCGTCTCTGCAGCC
ACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260UA2 |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR037518 |
| DBxref | InterPro:IPR007717 |
| DBxref | InterPro:IPR016563 |
| DBxref | InterPro:IPR007716 |
| DBxref | PFAM:PF05020 |
| DBxref | PFAM:PF05021 |
| Product | nuclear protein localization protein 4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1270974..1273207 - |
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