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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1275920..1276687- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000427-T1 ID=CBS51388_000427-T1|Name=CBS51388_000427-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=768bp|location=Sequence derived from alignment at An01:1275920..1276687- (Aspergillus niger CBS 513.88)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAAAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG back to topCoding sequence (CDS) from alignment at An01:1275920..1276687- >CBS51388_000427-T1 ID=CBS51388_000427-T1|Name=CBS51388_000427-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=768bp|location=Sequence derived from alignment at An01:1275920..1276687- (Aspergillus niger CBS 513.88)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAAAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092654KW |
| DBxref | InterPro:IPR036855 |
| DBxref | InterPro:IPR000571 |
| DBxref | PFAM:PF00642 |
| Product | RNA-binding component of cleavage and polyadenylation factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1275920..1276687 - |
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