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CBS51388_000487-T1, CBS51388_000487-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000487-T1
Unique NameCBS51388_000487-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1453353..1454703-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000487-T1 ID=CBS51388_000487-T1|Name=CBS51388_000487-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1351bp|location=Sequence derived from alignment at An01:1453353..1454703- (Aspergillus niger CBS 513.88)
ATGTCGGTATGTTTTTGCTTCTTCCAGCATCTCAACCCTCTCAATGGCAA
TGTTAATACTCATGATGCCTCCAGTTCTTCATTGAAAACCCTAATGTCGG
GGACAGATGCTCCCTCGAGGATTCCAGAAGTAAGTGCGCCCGTGACTCAC
TTGCAAAATTCCGTCACCCGTTAACCCTCGGTTTCTCTTTTCCTCTACAG
TTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATC
GCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGC
TATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTG
TCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGC
GATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGT
CATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTC
TCATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTT
CGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCAT
CGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTC
TCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGT
GAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGA
CGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTC
ACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACC
GTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCC
CAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCC
AGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAG
AAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAAT
CGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCA
ACGAGGGTATGTTCTACCTTTTTTCCCTCCCCCCAACCCAACACCTTCCA
TCACACCATCCCACTAACATCACCACAACAGGCAACCAAAAGGTTCCTCC
CGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCA
TCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTG
CGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATA
A
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Coding sequence (CDS) from alignment at An01:1453353..1454703-

>CBS51388_000487-T1 ID=CBS51388_000487-T1|Name=CBS51388_000487-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4548bp|location=Sequence derived from alignment at An01:1453353..1454703- (Aspergillus niger CBS 513.88)
GCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTC
AGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGA
GAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATG
GCAACGGCAACTCCCAATAATTCGTGGATACAACCCTCTCACACCCCCCA
ACCTCCTTCAGCATGAGATCGCCATGACGGAGAAGTCCCGGCGAACGGTC
ATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGA
CCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTG
AAATGGCCCTCGAATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTAC
AAGGATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTAC
CACCGTCGGCTGGAAGGGTCTCATCAACGACCCCGACATTGACAACAGCT
TCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTG
ACCAACAAGGGTATGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCC
CCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCA
CCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTT
GGTTTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCAT
TGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTG
TCGCTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTC
CGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGC
TAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACT
GCAGCCACGGTAACTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCT
GCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGT
CATGATCGAGAGCAACATCAACGAGGTTCTTCATTGAAAACCCTAATGTC
GGGGACAGATGCTCCCTCGAGGATTCCAGAAATGTCGGCAACCAAAAGGT
TCCTCCCGAGGGCAAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACG
CCTGCATCCACTGGGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAG
GCTGTGCGCACCCGCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTC
CCAATAATTCGTGGATACAACCCTCTCACACCCCCCAACCTCCTTCAGCA
TGAGATCGCCATGACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTG
AGGAGGCTATTGCTATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTG
CTGGTTGTCATCGGTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGA
ATACTGCGATCGCCTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGC
TGATTGTCATGCGCTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGG
AAGGGTCTCATCAACGACCCCGACATTGACAACAGCTTCAAGATCAACAA
GGGTCTTCGCACCTCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTA
TGCCCATCGCCAGTGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCC
GACTGTCTCTCCGTCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGT
CCACCGTGAGTTGGCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACG
GTACCGACGGCTCCCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAG
CACCCTCACCACTTCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGT
CGGCACCGTGGGCAACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGA
AGGGCCCCAACTACGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTG
ACCGCCCAGGGCATGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAA
CTCGCAGAAGAACCACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCG
AGCAAATCGCCGCTGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGC
AACATCAACGAGGTTCTTCATTGAAAACCCTAATGTCGGGGACAGATGCT
CCCTCGAGGATTCCAGAAATGTCGGCAACCAAAAGGTTCCTCCCGAGGGC
AAGGCCGGCCTCAAGTACGGTGTCAGTATCACCGACGCCTGCATCCACTG
GGAAGACACGGAACTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCC
GCCGGGAAAAGCTTGCTATCAATGGCAACGGCAACTCCCAATAATTCGTG
GATACAACCCTCTCACACCCCCCAACCTCCTTCAGCATGAGATCGCCATG
ACGGAGAAGTCCCGGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGC
TATCGTCCAGGGCACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCG
GTCCCTGCTCCATCCACGACCCTGAAATGGCCCTCGAATACTGCGATCGC
CTCATGAAGATGAAGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCG
CTCCTACCTCGAGAAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCA
ACGACCCCGACATTGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACC
TCCCGTCAACTTTTCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAG
TGAGATGCTCGATACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCG
TCGGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTG
GCCTCGGGTCTGTCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTC
CCTGGATGTCGCTGTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACT
TCCTGTCCGTCACCAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGC
AACCCCGACTGCTTCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTA
CGATGCCCAGAGCATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCA
TGCCTCCCCGCCTCATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAAC
CACAAGAACCAGCCCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGC
TGGAGAGACCGCCATCATGGGTGTCATGATCGAGAGCAACATCAACGAGG
TTCTTCATTGAAAACCCTAATGTCGGGGACAGATGCTCCCTCGAGGATTC
CAGAAATGTCGGCAACCAAAAGGTTCCTCCCGAGGGCAAGGCCGGCCTCA
AGTACGGTGTCAGTATCACCGACGCCTGCATCCACTGGGAAGACACGGAA
CTTGTTCTGGAGAACCTGGCACAGGCTGTGCGCACCCGCCGGGAAAAGCT
TGCTATCAATGGCAACGGCAACTCCCAATAATTCGTGGATACAACCCTCT
CACACCCCCCAACCTCCTTCAGCATGAGATCGCCATGACGGAGAAGTCCC
GGCGAACGGTCATGGAAGGTCGTGAGGAGGCTATTGCTATCGTCCAGGGC
ACAGACACCGACCGTCGCCGTTTGCTGGTTGTCATCGGTCCCTGCTCCAT
CCACGACCCTGAAATGGCCCTCGAATACTGCGATCGCCTCATGAAGATGA
AGGAGAAGTACAAGGATGAGCTGCTGATTGTCATGCGCTCCTACCTCGAG
AAGCCCCGTACCACCGTCGGCTGGAAGGGTCTCATCAACGACCCCGACAT
TGACAACAGCTTCAAGATCAACAAGGGTCTTCGCACCTCCCGTCAACTTT
TCGTCGACCTGACCAACAAGGGTATGCCCATCGCCAGTGAGATGCTCGAT
ACCATCTCCCCCCAGTTTCTGGCCGACTGTCTCTCCGTCGGCGCCGTTGG
TGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTGT
CCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGCTCCCTGGATGTCGCT
GTCGATGCCATTGGCTCCGTCAAGCACCCTCACCACTTCCTGTCCGTCAC
CAAGCCCGGTGTCGCTGCTATCGTCGGCACCGTGGGCAACCCCGACTGCT
TCGTCATCCTCCGTGGTGGCAAGAAGGGCCCCAACTACGATGCCCAGAGC
ATCGCCGAGGCTAAGGCCAAGCTGACCGCCCAGGGCATGCCTCCCCGCCT
CATGGTCGACTGCAGCCACGGTAACTCGCAGAAGAACCACAAGAACCAGC
CCAAGGTGGCTGCTGTTCTGGCCGAGCAAATCGCCGCTGGAGAGACCGCC
ATCATGGGTGTCATGATCGAGAGCAACATCAACGAGGTTCTTCATTGAAA
ACCCTAATGTCGGGGACAGATGCTCCCTCGAGGATTCCAGAAATGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009073aromatic amino acid family biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00038493-deoxy-7-phosphoheptulonate synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AMT16CBS51388_000487Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000487-T1CBS51388_000487-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000487-T1.cdsCBS51388_000487-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000487-T1.exon4CBS51388_000487-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000487-T1.exon3CBS51388_000487-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000487-T1.exon2CBS51388_000487-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000487-T1.exon1CBS51388_000487-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR006218
DBxrefInterPro:IPR006219
DBxrefInterPro:IPR013785
DBxrefPFAM:PF00793
ProductPhospho-2-dehydro-3-deoxyheptonate aldolase amt16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1453353..1454703 -
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