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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1594021..1595315+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000540-T1 ID=CBS51388_000540-T1|Name=CBS51388_000540-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1295bp|location=Sequence derived from alignment at An01:1594021..1595315+ (Aspergillus niger CBS 513.88)
ATGGCCAACCAGCTGCATAGTGCCCCGCCCTTCCGGGCCGAACATATGGG
TTCCTTGCTCCGTCCCGAGAGCCTGCTTGCCGTGCGCGAGAAGATTCGCG
ATACCGGCATCTCCGAGGAGGCTGCTGGTCTGCACGCCGTTGAGAAAGAG
ACCGTTCGTGATGTGGTCAAGCTCCAGCGGGATCTGGGTTACAAGGCTGT
TACTTCTGGTGAATTTAACCGGACTCGTTTCTGGGGACAGATGTGGGATG
AGTTCGAGGGTATGGTTCATCGTTCTGATCTTATTTCTAGCGCATTGTTG
GGAGCATATCACTTACTGATAAGTCAGGCACAATCCGTCTTCAGGATGCT
GAAGCCTCCATGTTCAGACTCTACCACCCCGACGTGGTTAGTCTGATTGA
GAAGGACCGCAAGGTCATGCCCGGTGACTCGGTGATCGCTGGAACCAAGC
TTTCCTGGAACCCCGAGAAGTCGGTGTCAAACCTACATGAACTGAAGCTG
GTTCAACAGGCCTTGCCTGAGAGTGAATGGCACACCATCAAGCTGACCAT
GATCACTCCCGCCTGGTTCCACATGCGCTACAAGCAGGGTAAGGCTTACA
CTCCCGAGGCCTATGCCAACGACGAGGAGTACTTCCAGGACGTCGCAAAG
GTGTACCAGGCCGAGCTTGACGCCCTGTACAAGGCTGGTCTGAGAAACGT
CCAGTTCGATGACCCCGGCATGGCGTACTTCTGCTCCAAGGCTTTCCGCC
AGGGCTGGGAAGAAGACAAGGATAACATTGGCACCGTTGAGGATCTGCTT
GATGCCTACATCAAGCTGTACAACGACTCTCTGAGCAAGATCCCTGCTGA
CATGCACACGGGTATTCACCTTTGCCGTGGTAACTTCATCGGAGGCAGAC
ACTTCGCGGAGGGATCCTATGACATCATCGCCAAGAAGCTGTTCGAGAAC
CTGAACGTGAACACATTCTACCTTGAGTATGACACCGAGCGTGCAGGTGG
CTTCGAGCCCCTCAAGTTCTTGCCCAAGAACAAGAACGTTGTTGTCGGTG
TCATCAGCACCAAGCTTCGCGAGCTGGAGGACAAGGAGGCGATGAAGGAG
CGGATTTACAAGGCCGCCGACTTCGTCAGCGCCGGTAGTGGTGAGACTCG
TGAGGAGGCTCTGAAGCGTATCTGCGTCAGCCCTCAGTGCGGTTTCAGTA
CCCACGAGAGCGGATACCCCCTCAGTTTGGAGGATGAGAAGAAGAAGCTG
GGTCTGACCAGACAGATCGCCGATGAGATCTGGGGACAGCCCTGA back to topCoding sequence (CDS) from alignment at An01:1594021..1595315+ >CBS51388_000540-T1 ID=CBS51388_000540-T1|Name=CBS51388_000540-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2454bp|location=Sequence derived from alignment at An01:1594021..1595315+ (Aspergillus niger CBS 513.88)
ATGGCCAACCAGCTGCATAGTGCCCCGCCCTTCCGGGCCGAACATATGGG
TTCCTTGCTCCGTCCCGAGAGCCTGCTTGCCGTGCGCGAGAAGATTCGCG
ATACCGGCATCTCCGAGGAGGCTGCTGGTCTGCACGCCGTTGAGAAAGAG
ACCGTTCGTGATGTGGTCAAGCTCCAGCGGGATCTGGGTTACAAGGCTGT
TACTTCTGGTGAATTTAACCGGACTCGTTTCTGGGGACAGATGTGGGATG
AGTTCGAGGGCACAATCCGTCTTCAGGATGCTGAAGCCTCCATGTTCAGA
CTCTACCACCCCGACGTGGTTAGTCTGATTGAGAAGGACCGCAAGGTCAT
GCCCGGTGACTCGGTGATCGCTGGAACCAAGCTTTCCTGGAACCCCGAGA
AGTCGGTGTCAAACCTACATGAACTGAAGCTGGTTCAACAGGCCTTGCCT
GAGAGTGAATGGCACACCATCAAGCTGACCATGATCACTCCCGCCTGGTT
CCACATGCGCTACAAGCAGGGTAAGGCTTACACTCCCGAGGCCTATGCCA
ACGACGAGGAGTACTTCCAGGACGTCGCAAAGGTGTACCAGGCCGAGCTT
GACGCCCTGTACAAGGCTGGTCTGAGAAACGTCCAGTTCGATGACCCCGG
CATGGCGTACTTCTGCTCCAAGGCTTTCCGCCAGGGCTGGGAAGAAGACA
AGGATAACATTGGCACCGTTGAGGATCTGCTTGATGCCTACATCAAGCTG
TACAACGACTCTCTGAGCAAGATCCCTGCTGACATGCACACGGGTATTCA
CCTTTGCCGTGGTAACTTCATCGGAGGCAGACACTTCGCGGAGGGATCCT
ATGACATCATCGCCAAGAAGCTGTTCGAGAACCTGAACGTGAACACATTC
TACCTTGAGTATGACACCGAGCGTGCAGGTGGCTTCGAGCCCCTCAAGTT
CTTGCCCAAGAACAAGAACGTTGTTGTCGGTGTCATCAGCACCAAGCTTC
GCGAGCTGGAGGACAAGGAGGCGATGAAGGAGCGGATTTACAAGGCCGCC
GACTTCGTCAGCGCCGGTAGTGGTGAGACTCGTGAGGAGGCTCTGAAGCG
TATCTGCGTCAGCCCTCAGTGCGGTTTCAGTACCCACGAGAGCGGATACC
CCCTCAGTTTGGAGGATGAGAAGAAGAAGCTGGGTCTGACCAGACAGATC
GCCGATGAGATCTGGGGACAGCCCTGAATGGCCAACCAGCTGCATAGTGC
CCCGCCCTTCCGGGCCGAACATATGGGTTCCTTGCTCCGTCCCGAGAGCC
TGCTTGCCGTGCGCGAGAAGATTCGCGATACCGGCATCTCCGAGGAGGCT
GCTGGTCTGCACGCCGTTGAGAAAGAGACCGTTCGTGATGTGGTCAAGCT
CCAGCGGGATCTGGGTTACAAGGCTGTTACTTCTGGTGAATTTAACCGGA
CTCGTTTCTGGGGACAGATGTGGGATGAGTTCGAGGGCACAATCCGTCTT
CAGGATGCTGAAGCCTCCATGTTCAGACTCTACCACCCCGACGTGGTTAG
TCTGATTGAGAAGGACCGCAAGGTCATGCCCGGTGACTCGGTGATCGCTG
GAACCAAGCTTTCCTGGAACCCCGAGAAGTCGGTGTCAAACCTACATGAA
CTGAAGCTGGTTCAACAGGCCTTGCCTGAGAGTGAATGGCACACCATCAA
GCTGACCATGATCACTCCCGCCTGGTTCCACATGCGCTACAAGCAGGGTA
AGGCTTACACTCCCGAGGCCTATGCCAACGACGAGGAGTACTTCCAGGAC
GTCGCAAAGGTGTACCAGGCCGAGCTTGACGCCCTGTACAAGGCTGGTCT
GAGAAACGTCCAGTTCGATGACCCCGGCATGGCGTACTTCTGCTCCAAGG
CTTTCCGCCAGGGCTGGGAAGAAGACAAGGATAACATTGGCACCGTTGAG
GATCTGCTTGATGCCTACATCAAGCTGTACAACGACTCTCTGAGCAAGAT
CCCTGCTGACATGCACACGGGTATTCACCTTTGCCGTGGTAACTTCATCG
GAGGCAGACACTTCGCGGAGGGATCCTATGACATCATCGCCAAGAAGCTG
TTCGAGAACCTGAACGTGAACACATTCTACCTTGAGTATGACACCGAGCG
TGCAGGTGGCTTCGAGCCCCTCAAGTTCTTGCCCAAGAACAAGAACGTTG
TTGTCGGTGTCATCAGCACCAAGCTTCGCGAGCTGGAGGACAAGGAGGCG
ATGAAGGAGCGGATTTACAAGGCCGCCGACTTCGTCAGCGCCGGTAGTGG
TGAGACTCGTGAGGAGGCTCTGAAGCGTATCTGCGTCAGCCCTCAGTGCG
GTTTCAGTACCCACGAGAGCGGATACCCCCTCAGTTTGGAGGATGAGAAG
AAGAAGCTGGGTCTGACCAGACAGATCGCCGATGAGATCTGGGGACAGCC
CTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009086 | methionine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002629 |
| DBxref | InterPro:IPR038071 |
| DBxref | PFAM:PF01717 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1594021..1595315 + |
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