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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1609568..1610617+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000546-T1 ID=CBS51388_000546-T1|Name=CBS51388_000546-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1050bp|location=Sequence derived from alignment at An01:1609568..1610617+ (Aspergillus niger CBS 513.88)
ATGAATTATCAGCAAGGGAAACTAGTCCTCATTACCGGAGCCACCGGGCA
TGTTGGCCACGCTGTTTTGCTCCGTGCCCTCTCGGCCGGATACCAGGTAC
GAATTACGCTAAGGGAACCCTCCAAGGCAGCCCTTGTCCGGGACTCGTTA
CCTGGCAGGTACCACCTGAACCGACTCTCTTTTGTCACCGTCTGCGACCT
CACTCAACGAGGAGCCTTCGACGAAGCCCTACAAGATGTGTCCTACATCA
TCCATATAGCAAGCCCCCTACAACGTCCCACTTACACCGACTACAACCGA
GATATCATTGCGCCAACTGTCCAAGGAACCTCCAACCTCCTGCACTCGGC
CCTGAACCACCCTACGGTACAACGGATCGTTATCACCTCGTCTACATCTG
CCATTCTAGACATCAACCCTACCAATAATCTACCCCTCACACCCTCGGAC
CACCCCATTTCGACAACCCACCGCCACCCTAACTATGGCCCGGACTTCAT
CACAACCTCCGAACACGCCTACATAGCCGCCAAAACCGCTGCCCTAAACC
TCGCAAGCGCTTTTCGTGCTCAAAATTTGCCCCATTTCGACATCATCCAT
CTTCTCCCGGGCTACGTCTTCGGACCCAAGGGTTTAGCCACTACCCCCCG
GGAAGCTATCAGCGGAAGTAATGTGTTCGGAATCGGGCTGGTGATGAGAA
AAGGGTCATGGAGAGACTGGGTTGTTGAGGCAATGTCGTGTCATGTGGAT
GATATTGCCGAGGCGCATGTCAATGCCCTTGATCCCAGGGTAGCAGGGAA
TCAGGACTTCATATTATCTGTTCCATTTCGGCCGGAGGAGGTGAAGAGCA
TTATCCGAAAAAGGTTCCCTGAGGAAGGAGACATGGTCAAAGAGGGTATT
TTTGCGGGTGGAAATGAGTATTACCGTTGGTTTCATGTTTCTTATGATGT
GAGTAGCAGTGAAGAGATGTTGTTGGGCCGAAAGTTGAGGGGCATTGAGG
AGCAGATCGTTGATTCTGCGAAGCAGGTTCTGGCTTTGGTTAAAAACTAG
back to topCoding sequence (CDS) from alignment at An01:1609568..1610617+ >CBS51388_000546-T1 ID=CBS51388_000546-T1|Name=CBS51388_000546-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1050bp|location=Sequence derived from alignment at An01:1609568..1610617+ (Aspergillus niger CBS 513.88)
ATGAATTATCAGCAAGGGAAACTAGTCCTCATTACCGGAGCCACCGGGCA
TGTTGGCCACGCTGTTTTGCTCCGTGCCCTCTCGGCCGGATACCAGGTAC
GAATTACGCTAAGGGAACCCTCCAAGGCAGCCCTTGTCCGGGACTCGTTA
CCTGGCAGGTACCACCTGAACCGACTCTCTTTTGTCACCGTCTGCGACCT
CACTCAACGAGGAGCCTTCGACGAAGCCCTACAAGATGTGTCCTACATCA
TCCATATAGCAAGCCCCCTACAACGTCCCACTTACACCGACTACAACCGA
GATATCATTGCGCCAACTGTCCAAGGAACCTCCAACCTCCTGCACTCGGC
CCTGAACCACCCTACGGTACAACGGATCGTTATCACCTCGTCTACATCTG
CCATTCTAGACATCAACCCTACCAATAATCTACCCCTCACACCCTCGGAC
CACCCCATTTCGACAACCCACCGCCACCCTAACTATGGCCCGGACTTCAT
CACAACCTCCGAACACGCCTACATAGCCGCCAAAACCGCTGCCCTAAACC
TCGCAAGCGCTTTTCGTGCTCAAAATTTGCCCCATTTCGACATCATCCAT
CTTCTCCCGGGCTACGTCTTCGGACCCAAGGGTTTAGCCACTACCCCCCG
GGAAGCTATCAGCGGAAGTAATGTGTTCGGAATCGGGCTGGTGATGAGAA
AAGGGTCATGGAGAGACTGGGTTGTTGAGGCAATGTCGTGTCATGTGGAT
GATATTGCCGAGGCGCATGTCAATGCCCTTGATCCCAGGGTAGCAGGGAA
TCAGGACTTCATATTATCTGTTCCATTTCGGCCGGAGGAGGTGAAGAGCA
TTATCCGAAAAAGGTTCCCTGAGGAAGGAGACATGGTCAAAGAGGGTATT
TTTGCGGGTGGAAATGAGTATTACCGTTGGTTTCATGTTTCTTATGATGT
GAGTAGCAGTGAAGAGATGTTGTTGGGCCGAAAGTTGAGGGGCATTGAGG
AGCAGATCGTTGATTCTGCGAAGCAGGTTCTGGCTTTGGTTAAAAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.3 |
| Note | SMCOG1010:NAD-dependent epimerase/dehydratase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1609568..1610617 + |
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