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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1701115..1702571+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000574-T1 ID=CBS51388_000574-T1|Name=CBS51388_000574-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1457bp|location=Sequence derived from alignment at An01:1701115..1702571+ (Aspergillus niger CBS 513.88)
ATGGCGGAGTCTTCCAATTCCGCCGCGGCTTCAGGCCCGGCCCAGTCCGC
AGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATGCTTG
GTATAGATCCCCAATGCCCTCAGCCAGTATCCTTATACCTAATAGTCTTC
AAGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATC
TTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAG
AGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCT
CCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTC
CTGTCCGCGCCACCGGGTGACGGTATCCGCGTAGCTCGCGACCACTTCAA
AGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCA
TCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATT
CGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCC
CACGGTCGAAGATGTCGTTTTCGCCGCGAGGACGCAGATGGGCGTTATAG
AGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGCCACACATGGAAG
GAGTATATTCGCGGTCTGCATGAAGGTTGGCTGGGTCCTCTTGATCCTCC
CCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACAC
CCGCCGCAGAGACCGCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCCC
GAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACC
AGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTA
TCCCCCAGACTCTTTCAGGCTCCGTTCCCATCGCCTTCCCCCACATCCTG
GGTTTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCA
CATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCAT
ACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATC
TCCGACGATACCCTTGGCAACACCACCTATGAACAACAGACCGTCCTCGA
GGAGGAAGAAAGGGAATGGCATAAGTCCGTCCACCGCAAGGACGAAGCCA
ACCCTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCGC
CTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCG
CGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCC
CTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGA
GAGGATGAGGAGACGTTGAGGAGGAAGCCCATCTTGGGCAACCTTGATGA
GGAGTAA back to topCoding sequence (CDS) from alignment at An01:1701115..1702571+ >CBS51388_000574-T1 ID=CBS51388_000574-T1|Name=CBS51388_000574-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2808bp|location=Sequence derived from alignment at An01:1701115..1702571+ (Aspergillus niger CBS 513.88)
ATGGCGGAGTCTTCCAATTCCGCCGCGGCTTCAGGCCCGGCCCAGTCCGC
AGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATGCTTG
GAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGATCTTC
TTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGAGAGA
GAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATCTCCA
AGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTTCCTG
TCCGCGCCACCGGGTGACGGTATCCGCGTAGCTCGCGACCACTTCAAAGA
ATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATCATCG
AAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCATTCGC
AAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACCCCAC
GGTCGAAGATGTCGTTTTCGCCGCGAGGACGCAGATGGGCGTTATAGAGG
AGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGCCACACATGGAAGGAG
TATATTCGCGGTCTGCATGAAGGTTGGCTGGGTCCTCTTGATCCTCCCCC
TCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACACCCG
CCGCAGAGACCGCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCCCGAG
CAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACACCAGC
TTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACTATCC
CCCAGACTCTTTCAGGCTCCGTTCCCATCGCCTTCCCCCACATCCTGGGT
TTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCCACAT
GGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCATACA
GCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCATCTCC
GACGATACCCTTGGCAACACCACCTATGAACAACAGACCGTCCTCGAGGA
GGAAGAAAGGGAATGGCATAAGTCCGTCCACCGCAAGGACGAAGCCAACC
CTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCGCCTC
GCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCCGCGC
TCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGCCCTG
TTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGGAGAG
GATGAGGAGACGTTGAGGAGGAAGCCCATCTTGGGCAACCTTGATGAGGA
GTAAATGGCGGAGTCTTCCAATTCCGCCGCGGCTTCAGGCCCGGCCCAGT
CCGCAGCGTCTACCAGCGCTCCCAAGCCCTCCAACCCAGCCTTCAGAATG
CTTGGAATGCCGAACCTTCGCATGAAACTTCCCTCTCGGAATTGGATGAT
CTTCTTCACCATCACCGGCTCGTTCGCCGCAGCTGTCATTTACGACCGGA
GAGAGAAGCGCCGCGCGCAACAAAAATGGAGTGATCTCGTCGCTCACATC
TCCAAGGAGCATCTTCCCATCGAGCAAACCCGACGCAAAATCAACGTCTT
CCTGTCCGCGCCACCGGGTGACGGTATCCGCGTAGCTCGCGACCACTTCA
AAGAATACGTTAAGCCGATCCTCGTGGCAGCGGCACTAGACTACCAAATC
ATCGAAGGCAGAAGGGAAGGCGACATCCGTGCTGGTTACGCGGAGCGCAT
TCGCAAGTGGAGACGTAAGGCAGGCGAACCGAGTACGGTGGTGGAGGACC
CCACGGTCGAAGATGTCGTTTTCGCCGCGAGGACGCAGATGGGCGTTATA
GAGGAGCCCGGACCGAAGGGTGATTTGGTCATCGGTCGCCACACATGGAA
GGAGTATATTCGCGGTCTGCATGAAGGTTGGCTGGGTCCTCTTGATCCTC
CCCCTCCGCCTCCTGCCACGGAGGATCCCGCTCCTGTGGAATCCAGCACA
CCCGCCGCAGAGACCGCCTCTGAGACCAAGGAGGGCGACGCCAACGCCCC
CGAGCAGGAAAAGAAGGAAGAGAAGCCTGCTAAACCCGTGGGACCGACAC
CAGCTTACATCTCCACATCCGACTACTCATCGCAACCCCTCCCGCGTACT
ATCCCCCAGACTCTTTCAGGCTCCGTTCCCATCGCCTTCCCCCACATCCT
GGGTTTCCTCAACACCCCCATCAGACTCTACCGCTACCTTAACCAGCGCC
ACATGGCCGAGAGCGTAGGCCGCGACGTCGCAGCCATTGTCCTGGCCTCA
TACAGCCGCCCTTACAACACCGGCTCCGTCTCCTCGGATGCCTCCCCCAT
CTCCGACGATACCCTTGGCAACACCACCTATGAACAACAGACCGTCCTCG
AGGAGGAAGAAAGGGAATGGCATAAGTCCGTCCACCGCAAGGACGAAGCC
AACCCTGACAAGGAACGCGAGTGGCTCGACGACATCGTCATCGATCCGCG
CCTCGCCTCCCGCATGCATCGCTACAGCGTCTCGCCTGAGGAAGAGGCCC
GCGCTCAGCGCATCCTCGAAGGCCAGGAATACATCCTGGGTCAGGAACGC
CCTGTTCCTGTGTCGTTCTGGAAGCGCATGTGGGTGAAGTATGGATACGG
AGAGGATGAGGAGACGTTGAGGAGGAAGCCCATCTTGGGCAACCTTGATG
AGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263XVS |
| DBxref | InterPro:IPR021056 |
| DBxref | PFAM:PF11711 |
| Product | mitochondrial import inner membrane translocase subunit tim54 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1701115..1702571 + |
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