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CBS51388_000610-T1, CBS51388_000610-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000610-T1
Unique NameCBS51388_000610-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1790170..1791374-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000610-T1 ID=CBS51388_000610-T1|Name=CBS51388_000610-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1205bp|location=Sequence derived from alignment at An01:1790170..1791374- (Aspergillus niger CBS 513.88)
ATGCCTCTCTCATCCTTCCTCCCCCATATTCCGTATCCCCCCTCCAGGGA
GGGATATTGGAGCCCCGTCACGTCCACGCTGAATTGGTGCGAAGAGGTAT
ACGCGGCGCTCAGTTCCACTTCACTCTTGGTTACTCTTTCTACTATTACA
ATAGGTTGCTAACCATCATGCGAACGAGATAGGATTACTATGCCACCATC
TACTCCGCAGAGATCGTCAATACGCTGACAAACCTGCTGTTTATGGCCCT
TGGAATCAAGGGTTTCCTAAGTTGTCGTCGCAATGGACATGACTCGATTT
TCCAGGTCGCTTATCTTGGCTATCTGCTAGTCGGAACTGGAAGCTTCCTC
TTCCATTCAACGTTGAAATGTAAGTGAGGTGGCATCGTGGGGGAGGGGTA
GCCTGTGTTGTTCGAAATTGCTAATCCGTGCATTGAACACACAGATCCCA
TGCAGCTGGTCGATGAACTGTCCATGATATACACCACGTGTCTGATGTGC
TATGCATCCTTCTCATACTCCAGACCGAATGGCTTCCGCGTCGTCCTGGG
CATCTTTCTTGCCAGCTTGGCAATTTTCATCACCCTTTACTACCACTACC
TCCAGGATCCCCTGTTCCACCAGAACGCATATGGCATCTTGACAGCCATC
GTCCTCATCCGCAGCATGTACACTATGGAGGTGACGCTTCGTCCTCGCTG
GCGTCATTCAACGGAGGAGGACAGGCTTGCGCGTGAGAAGCAGGGCCTGC
CCGTTCCGACTAAGGAACACCAACATTACGAAAACGTGCGGGACATCAAG
ACTCTCAAGACAATGTGGTTCATGGTTATCTACGGTTTGAGCGTGTTCCT
GGGCGGGTTTGCCATCTGGGGCTTGGACAATGCCTTCTGTCCGAAGATCC
GCGGATGGCGCCGGCAAGTGGGTCTTCCCTGGGGCATTCTACTGGAAGGC
CATGGTTGGTGGTATGTTTCGCGCTGACACTATGCGTCCGACTGCCCTTC
CAATACTAATTTTCTTACTAGGCATTTGATGACTGGCCTTGGGGCCTATA
TGTACCTTGTTTGGGGCATCTGGCTCCGTCACTGCTTGAACAACCGCCAG
GAAGAGTACCATCTGTGGTGGCCTCGCATTTGGAACATCCCCGAGGTTCT
CCGCACCGGCGCTCCAGGCAAGGGCGCGAATGGAGTGGCCAAGAAGTCGA
ATTAA
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Coding sequence (CDS) from alignment at An01:1790170..1791374-

>CBS51388_000610-T1 ID=CBS51388_000610-T1|Name=CBS51388_000610-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3936bp|location=Sequence derived from alignment at An01:1790170..1791374- (Aspergillus niger CBS 513.88)
GCATTTGATGACTGGCCTTGGGGCCTATATGTACCTTGTTTGGGGCATCT
GGCTCCGTCACTGCTTGAACAACCGCCAGGAAGAGTACCATCTGTGGTGG
CCTCGCATTTGGAACATCCCCGAGGTTCTCCGCACCGGCGCTCCAGGCAA
GGGCGCGAATGGAGTGGCCAAGAAGTCGAATTAAATCCCATGCAGCTGGT
CGATGAACTGTCCATGATATACACCACGTGTCTGATGTGCTATGCATCCT
TCTCATACTCCAGACCGAATGGCTTCCGCGTCGTCCTGGGCATCTTTCTT
GCCAGCTTGGCAATTTTCATCACCCTTTACTACCACTACCTCCAGGATCC
CCTGTTCCACCAGAACGCATATGGCATCTTGACAGCCATCGTCCTCATCC
GCAGCATGTACACTATGGAGGTGACGCTTCGTCCTCGCTGGCGTCATTCA
ACGGAGGAGGACAGGCTTGCGCGTGAGAAGCAGGGCCTGCCCGTTCCGAC
TAAGGAACACCAACATTACGAAAACGTGCGGGACATCAAGACTCTCAAGA
CAATGTGGTTCATGGTTATCTACGGTTTGAGCGTGTTCCTGGGCGGGTTT
GCCATCTGGGGCTTGGACAATGCCTTCTGTCCGAAGATCCGCGGATGGCG
CCGGCAAGTGGGTCTTCCCTGGGGCATTCTACTGGAAGGCCATGGTTGGT
GGATTACTATGCCACCATCTACTCCGCAGAGATCGTCAATACGCTGACAA
ACCTGCTGTTTATGGCCCTTGGAATCAAGGGTTTCCTAAGTTGTCGTCGC
AATGGACATGACTCGATTTTCCAGGTCGCTTATCTTGGCTATCTGCTAGT
CGGAACTGGAAGCTTCCTCTTCCATTCAACGTTGAAATATGCCTCTCTCA
TCCTTCCTCCCCCATATTCCGTATCCCCCCTCCAGGGAGGGATATTGGAG
CCCCGTCACGTCCACGCTGAATTGGTGCGAAGAGGCATTTGATGACTGGC
CTTGGGGCCTATATGTACCTTGTTTGGGGCATCTGGCTCCGTCACTGCTT
GAACAACCGCCAGGAAGAGTACCATCTGTGGTGGCCTCGCATTTGGAACA
TCCCCGAGGTTCTCCGCACCGGCGCTCCAGGCAAGGGCGCGAATGGAGTG
GCCAAGAAGTCGAATTAAATCCCATGCAGCTGGTCGATGAACTGTCCATG
ATATACACCACGTGTCTGATGTGCTATGCATCCTTCTCATACTCCAGACC
GAATGGCTTCCGCGTCGTCCTGGGCATCTTTCTTGCCAGCTTGGCAATTT
TCATCACCCTTTACTACCACTACCTCCAGGATCCCCTGTTCCACCAGAAC
GCATATGGCATCTTGACAGCCATCGTCCTCATCCGCAGCATGTACACTAT
GGAGGTGACGCTTCGTCCTCGCTGGCGTCATTCAACGGAGGAGGACAGGC
TTGCGCGTGAGAAGCAGGGCCTGCCCGTTCCGACTAAGGAACACCAACAT
TACGAAAACGTGCGGGACATCAAGACTCTCAAGACAATGTGGTTCATGGT
TATCTACGGTTTGAGCGTGTTCCTGGGCGGGTTTGCCATCTGGGGCTTGG
ACAATGCCTTCTGTCCGAAGATCCGCGGATGGCGCCGGCAAGTGGGTCTT
CCCTGGGGCATTCTACTGGAAGGCCATGGTTGGTGGATTACTATGCCACC
ATCTACTCCGCAGAGATCGTCAATACGCTGACAAACCTGCTGTTTATGGC
CCTTGGAATCAAGGGTTTCCTAAGTTGTCGTCGCAATGGACATGACTCGA
TTTTCCAGGTCGCTTATCTTGGCTATCTGCTAGTCGGAACTGGAAGCTTC
CTCTTCCATTCAACGTTGAAATATGCCTCTCTCATCCTTCCTCCCCCATA
TTCCGTATCCCCCCTCCAGGGAGGGATATTGGAGCCCCGTCACGTCCACG
CTGAATTGGTGCGAAGAGGCATTTGATGACTGGCCTTGGGGCCTATATGT
ACCTTGTTTGGGGCATCTGGCTCCGTCACTGCTTGAACAACCGCCAGGAA
GAGTACCATCTGTGGTGGCCTCGCATTTGGAACATCCCCGAGGTTCTCCG
CACCGGCGCTCCAGGCAAGGGCGCGAATGGAGTGGCCAAGAAGTCGAATT
AAATCCCATGCAGCTGGTCGATGAACTGTCCATGATATACACCACGTGTC
TGATGTGCTATGCATCCTTCTCATACTCCAGACCGAATGGCTTCCGCGTC
GTCCTGGGCATCTTTCTTGCCAGCTTGGCAATTTTCATCACCCTTTACTA
CCACTACCTCCAGGATCCCCTGTTCCACCAGAACGCATATGGCATCTTGA
CAGCCATCGTCCTCATCCGCAGCATGTACACTATGGAGGTGACGCTTCGT
CCTCGCTGGCGTCATTCAACGGAGGAGGACAGGCTTGCGCGTGAGAAGCA
GGGCCTGCCCGTTCCGACTAAGGAACACCAACATTACGAAAACGTGCGGG
ACATCAAGACTCTCAAGACAATGTGGTTCATGGTTATCTACGGTTTGAGC
GTGTTCCTGGGCGGGTTTGCCATCTGGGGCTTGGACAATGCCTTCTGTCC
GAAGATCCGCGGATGGCGCCGGCAAGTGGGTCTTCCCTGGGGCATTCTAC
TGGAAGGCCATGGTTGGTGGATTACTATGCCACCATCTACTCCGCAGAGA
TCGTCAATACGCTGACAAACCTGCTGTTTATGGCCCTTGGAATCAAGGGT
TTCCTAAGTTGTCGTCGCAATGGACATGACTCGATTTTCCAGGTCGCTTA
TCTTGGCTATCTGCTAGTCGGAACTGGAAGCTTCCTCTTCCATTCAACGT
TGAAATATGCCTCTCTCATCCTTCCTCCCCCATATTCCGTATCCCCCCTC
CAGGGAGGGATATTGGAGCCCCGTCACGTCCACGCTGAATTGGTGCGAAG
AGGCATTTGATGACTGGCCTTGGGGCCTATATGTACCTTGTTTGGGGCAT
CTGGCTCCGTCACTGCTTGAACAACCGCCAGGAAGAGTACCATCTGTGGT
GGCCTCGCATTTGGAACATCCCCGAGGTTCTCCGCACCGGCGCTCCAGGC
AAGGGCGCGAATGGAGTGGCCAAGAAGTCGAATTAAATCCCATGCAGCTG
GTCGATGAACTGTCCATGATATACACCACGTGTCTGATGTGCTATGCATC
CTTCTCATACTCCAGACCGAATGGCTTCCGCGTCGTCCTGGGCATCTTTC
TTGCCAGCTTGGCAATTTTCATCACCCTTTACTACCACTACCTCCAGGAT
CCCCTGTTCCACCAGAACGCATATGGCATCTTGACAGCCATCGTCCTCAT
CCGCAGCATGTACACTATGGAGGTGACGCTTCGTCCTCGCTGGCGTCATT
CAACGGAGGAGGACAGGCTTGCGCGTGAGAAGCAGGGCCTGCCCGTTCCG
ACTAAGGAACACCAACATTACGAAAACGTGCGGGACATCAAGACTCTCAA
GACAATGTGGTTCATGGTTATCTACGGTTTGAGCGTGTTCCTGGGCGGGT
TTGCCATCTGGGGCTTGGACAATGCCTTCTGTCCGAAGATCCGCGGATGG
CGCCGGCAAGTGGGTCTTCCCTGGGGCATTCTACTGGAAGGCCATGGTTG
GTGGATTACTATGCCACCATCTACTCCGCAGAGATCGTCAATACGCTGAC
AAACCTGCTGTTTATGGCCCTTGGAATCAAGGGTTTCCTAAGTTGTCGTC
GCAATGGACATGACTCGATTTTCCAGGTCGCTTATCTTGGCTATCTGCTA
GTCGGAACTGGAAGCTTCCTCTTCCATTCAACGTTGAAATATGCCTCTCT
CATCCTTCCTCCCCCATATTCCGTATCCCCCCTCCAGGGAGGGATATTGG
AGCCCCGTCACGTCCACGCTGAATTGGTGCGAAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Vocabulary: Biological Process
TermDefinition
GO:0006672ceramide metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000610CBS51388_000610Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000610-T1CBS51388_000610-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000610-T1.cdsCBS51388_000610-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000610-T1.exon4CBS51388_000610-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000610-T1.exon3CBS51388_000610-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000610-T1.exon2CBS51388_000610-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000610-T1.exon1CBS51388_000610-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR008901
DBxrefPFAM:PF05875
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1790170..1791374 -
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