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CBS51388_000681-T1, CBS51388_000681-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000681-T1
Unique NameCBS51388_000681-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1997656..1999294+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000681-T1 ID=CBS51388_000681-T1|Name=CBS51388_000681-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1639bp|location=Sequence derived from alignment at An01:1997656..1999294+ (Aspergillus niger CBS 513.88)
ATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAACCCCCAA
GGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGACCGCATCT
TCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGCCCTCGAC
ACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATGGCGAGGA
CTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATCTGCTCTC
TCCGCTACGATCTTACCGTCCCCTTCGCCCGCTGGCTCGCCATGAACCCG
GATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACCGTCGCGA
TCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAGTGCGATT
TCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGAGATCCTG
CGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCCGCTATAA
CATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAGGTCTGCG
GTGTACCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGACAAGCTG
GACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGGAGAAGGG
CCTGGACAGCGCCGTGGCCGACAAGATCGAGACATACGTGATGCACAAGG
GCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCTGACTGCC
AACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGTCTGCTTATGGATTA
CCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATGAGCTTGG
CCCGCGGTCTCGATTACTACACCGGTGTGATCTACGAGGTCGTTACCGAG
GGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGGCCGTGCA
GAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAGGATGACG
ACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGT
CGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGATTCCCTG
TGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACCAAGGCCC
GTCTCGAGCGGGAGAAGAGCGCCGAAGCCCTCCGCAGCAGCGAGGTCGAT
GCCTACGTGATGGCCTTTGGAGGTAAGGGCTTCACGGGTATGTTGAAGGA
GCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAGGTAAGCT
CCCCCACCCCCACCTACCATCTTTTCTCCCCTCTTGCTATATACTAATAA
TCCATAGGCCGAATTCTCCTACAAGGTCAAGCCCAAGCTCCCCCAACAAT
TCAAGGCCGCCGAACAAGCCGGCGTCCCCTTCGCCGTCATTCTGGGCGAG
GACGAGCTCGCGGCCGGCAAGGTTCGCGTCAAGGAAATGGGTCTCGAGGA
CGGACACCCCGAGAAGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGG
CGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGT
GTTGCGCAGCAGTTGGGTGAGATGAAGGTTGATGCATAG
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Coding sequence (CDS) from alignment at An01:1997656..1999294+

>CBS51388_000681-T1 ID=CBS51388_000681-T1|Name=CBS51388_000681-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3150bp|location=Sequence derived from alignment at An01:1997656..1999294+ (Aspergillus niger CBS 513.88)
ATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAACCCCCAA
GGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGACCGCATCT
TCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGCCCTCGAC
ACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATGGCGAGGA
CTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATCTGCTCTC
TCCGCTACGATCTTACCGTCCCCTTCGCCCGCTGGCTCGCCATGAACCCG
GATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACCGTCGCGA
TCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAGTGCGATT
TCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGAGATCCTG
CGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCCGCTATAA
CATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAGGTCTGCG
GTGTACCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGACAAGCTG
GACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGGAGAAGGG
CCTGGACAGCGCCGTGGCCGACAAGATCGAGACATACGTGATGCACAAGG
GCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCTGACTGCC
AACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGTCTGCTTATGGATTA
CCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATGAGCTTGG
CCCGCGGTCTCGATTACTACACCGGTGTGATCTACGAGGTCGTTACCGAG
GGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGGCCGTGCA
GAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAGGATGACG
ACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGT
CGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGATTCCCTG
TGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACCAAGGCCC
GTCTCGAGCGGGAGAAGAGCGCCGAAGCCCTCCGCAGCAGCGAGGTCGAT
GCCTACGTGATGGCCTTTGGAGGTAAGGGCTTCACGGGTATGTTGAAGGA
GCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAGGCCGAAT
TCTCCTACAAGGTCAAGCCCAAGCTCCCCCAACAATTCAAGGCCGCCGAA
CAAGCCGGCGTCCCCTTCGCCGTCATTCTGGGCGAGGACGAGCTCGCGGC
CGGCAAGGTTCGCGTCAAGGAAATGGGTCTCGAGGACGGACACCCCGAGA
AGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGGCGGAGGTCAAGGCC
CGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGTGTTGCGCAGCAGTT
GGGTGAGATGAAGGTTGATGCATAGATGCCCAAAGAAAAGGAATCCAAGC
TCTCCTTCAACCTCAAAACCCCCAAGGGTACCAAGGACTGGTCCGGCTCC
GACGCCCTCCTCCGCGACCGCATCTTCTCCACCATCGCCGATGTCTTCAA
GCGCCATGGCGGTACTGCCCTCGACACCCCCGTCTTCGAGCTGCGCGAGA
TTCTCGCCGGTAAGTATGGCGAGGACTCCAAGCTCATTTACGACCTTCAA
GACCAGGGTGGAGAAATCTGCTCTCTCCGCTACGATCTTACCGTCCCCTT
CGCCCGCTGGCTCGCCATGAACCCGGATGTCCGCAGCATGAAGCGCTACC
ACATCGCCAAGGTGTACCGTCGCGATCAGCCCGCCGTGAGCAAGGGTCGC
ATGCGCGAGTTCTACCAGTGCGATTTCGATATCGCCGGTACCTTCGATCC
CATGGTCCCCGATGCCGAGATCCTGCGCATCGTCACCGAAGTCTTCGAGG
AGCTGGGCTGGAACGGCCGCTATAACATCAAGATCAACCACCGGAAGATT
CTGGACGGTGTGTTCCAGGTCTGCGGTGTACCCGAGGAGAAGATCCGTCC
CATCTCCAGTGCCGTCGACAAGCTGGACAAGATGCCCTGGGCGGACGTGC
GCAAGGAAATGGTCGAGGAGAAGGGCCTGGACAGCGCCGTGGCCGACAAG
ATCGAGACATACGTGATGCACAAGGGCGGTCGCGAACTCCTTGATAACCT
CCTCAAGGATGAGGGCCTGACTGCCAACGAGTCTGCCAAGGCCGGTCTGG
AAGATATGGGTCTGCTTATGGATTACCTCGAGGCATTCGGTGTGCTGGAC
AAGATCTCCTTCGACATGAGCTTGGCCCGCGGTCTCGATTACTACACCGG
TGTGATCTACGAGGTCGTTACCGAGGGCTCCGCCCCCGCCGTGGCGTCCT
CCGCACCGGAGGCCCAGGCCGTGCAGAAGTCCGGCAAGAAGAGCAAGTCC
AAGGGCGGCAATCTGGAGGATGACGACCGCTCCAACGACCCGACCCTGGG
TGTCGGCAGTGTCGCCGCAGGAGGTCGCTATGACAACCTGGTGGGCATGT
TCCTGCCCAAGGCGCAGATTCCCTGTGTGGGTGTGTCCTTCGGTGTGGAC
CGTATCTTCTCCATCACCAAGGCCCGTCTCGAGCGGGAGAAGAGCGCCGA
AGCCCTCCGCAGCAGCGAGGTCGATGCCTACGTGATGGCCTTTGGAGGTA
AGGGCTTCACGGGTATGTTGAAGGAGCGGATGAGCGTGTGCCAGACTCTC
TGGAACTCTGGCGTCAAGGCCGAATTCTCCTACAAGGTCAAGCCCAAGCT
CCCCCAACAATTCAAGGCCGCCGAACAAGCCGGCGTCCCCTTCGCCGTCA
TTCTGGGCGAGGACGAGCTCGCGGCCGGCAAGGTTCGCGTCAAGGAAATG
GGTCTCGAGGACGGACACCCCGAGAAGGAAGGTGTGCTGGTTGATCTGAC
TGCTCTGCCGGCGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGA
GTGTCGATGGTGTTGCGCAGCAGTTGGGTGAGATGAAGGTTGATGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004821histidine-tRNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006427histidyl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTS1CBS51388_000681Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000681-T1.exon1CBS51388_000681-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000681-T1.exon2CBS51388_000681-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000681-T1.cdsCBS51388_000681-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000681-T1CBS51388_000681-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033656
DBxrefInterPro:IPR015807
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR041715
DBxrefInterPro:IPR004516
DBxrefInterPro:IPR004154
DBxrefPFAM:PF13393
DBxrefPFAM:PF03129
ProductCytoplasmic and mitochondrial histidine tRNA synthetase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1997656..1999294 +
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