You are here

Home

CBS51388_000778-T1, CBS51388_000778-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000778-T1
Unique NameCBS51388_000778-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2308994..2310069-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000778-T1 ID=CBS51388_000778-T1|Name=CBS51388_000778-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1076bp|location=Sequence derived from alignment at An01:2308994..2310069- (Aspergillus niger CBS 513.88)
ATGGCTACCCACGTTGTGACTGCGACTACTACTGCCCCTGCTTTCACTGG
CAAGCAAATCTCCGTCTACGGTCACCCTTCTCCTGTCAACTCGGCCGAGA
CCTCTCCCGCAAATAACTCTCCTACTTCTCCTCGCTATCAGCACTTGCCG
CTTCAGTCGAAGCAACTCCGTCCCCTCAAGGGTCCTCTCTACGTTCCTGC
TGCCTTGCGCCCCACTGAGCGTCCCCAGAAGGCCTCTTCTCCCCCGACTC
CTCCCCGCAGCGTTCACGGTTCTCACGGCTCTCTCGACAGCCTGAACGAG
GGCGAAGTTGGTGCACCTGTTACTCGTCGTTCGACCATGGAGAGCTACAA
CAGCGGTCCTGCTGTCAGCAAGCTGGCAGAGGATGAATGGATGAAGAATG
AGCACCTGGGCGAGGTCACTGGTCTTCCCACTCGTGATCACTGGAAAGTA
AGTGAAACCACTACTTCAGTCCCTTCTTCCCTGGGTGGACGCGTCTACTA
TATAGTGTTGTCATGGCGCAAGCCGGGCTCCGGGTCGCGCCATCATTGCG
TTGCGCGATATCGCGTGATTGCCATGACGACATCCAGACAGCCTCACAAC
AATCACCCCTTGCAAAGAAGTGAACTTGTGCTAACAAAACCTCCCAACAG
GCGGACTCTGCTTCCCCCAACTGCGACTCTCCTACCTGCCGCTCCTCTTT
CGGTCTCTTCCTTCGCCGTCACCACTGTCGCCATTGCGGCCACGTCTTCT
GCTCCTCCCACACTCCTCATGTCGTCCCGCTTGATCAGAATGCTCGCTTC
CACCCTGATGGAGTTCCCTCCCGCGCATGCGACCTTTGCTGGAGCGCCTA
CCAGCGCTGGGAGGAGTCTCGTACGGAACGCCTCAGCAAGATCCAGAGCC
TGCTCGACGCCCAAAGCAGAGCCTCTGACAGTGACAATGAAGATGATAAT
ACCGCCTCCGACCGCTCGGATATCTCGCCGGACGAGAATGCGAAGCCCGC
CCTGACCGGAGTGTTGGCCCAGAGCACCGAGATTGCCGCCAGCGTTCCTC
GTGGCTGGAACTGGAGCACCTTCTAA
back to top

Coding sequence (CDS) from alignment at An01:2308994..2310069-

>CBS51388_000778-T1 ID=CBS51388_000778-T1|Name=CBS51388_000778-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1746bp|location=Sequence derived from alignment at An01:2308994..2310069- (Aspergillus niger CBS 513.88)
GCGGACTCTGCTTCCCCCAACTGCGACTCTCCTACCTGCCGCTCCTCTTT
CGGTCTCTTCCTTCGCCGTCACCACTGTCGCCATTGCGGCCACGTCTTCT
GCTCCTCCCACACTCCTCATGTCGTCCCGCTTGATCAGAATGCTCGCTTC
CACCCTGATGGAGTTCCCTCCCGCGCATGCGACCTTTGCTGGAGCGCCTA
CCAGCGCTGGGAGGAGTCTCGTACGGAACGCCTCAGCAAGATCCAGAGCC
TGCTCGACGCCCAAAGCAGAGCCTCTGACAGTGACAATGAAGATGATAAT
ACCGCCTCCGACCGCTCGGATATCTCGCCGGACGAGAATGCGAAGCCCGC
CCTGACCGGAGTGTTGGCCCAGAGCACCGAGATTGCCGCCAGCGTTCCTC
GTGGCTGGAACTGGAGCACCTTCTAAATGGCTACCCACGTTGTGACTGCG
ACTACTACTGCCCCTGCTTTCACTGGCAAGCAAATCTCCGTCTACGGTCA
CCCTTCTCCTGTCAACTCGGCCGAGACCTCTCCCGCAAATAACTCTCCTA
CTTCTCCTCGCTATCAGCACTTGCCGCTTCAGTCGAAGCAACTCCGTCCC
CTCAAGGGTCCTCTCTACGTTCCTGCTGCCTTGCGCCCCACTGAGCGTCC
CCAGAAGGCCTCTTCTCCCCCGACTCCTCCCCGCAGCGTTCACGGTTCTC
ACGGCTCTCTCGACAGCCTGAACGAGGGCGAAGTTGGTGCACCTGTTACT
CGTCGTTCGACCATGGAGAGCTACAACAGCGGTCCTGCTGTCAGCAAGCT
GGCAGAGGATGAATGGATGAAGAATGAGCACCTGGGCGAGGTCACTGGTC
TTCCCACTCGTGATCACTGGAAAGCGGACTCTGCTTCCCCCAACTGCGAC
TCTCCTACCTGCCGCTCCTCTTTCGGTCTCTTCCTTCGCCGTCACCACTG
TCGCCATTGCGGCCACGTCTTCTGCTCCTCCCACACTCCTCATGTCGTCC
CGCTTGATCAGAATGCTCGCTTCCACCCTGATGGAGTTCCCTCCCGCGCA
TGCGACCTTTGCTGGAGCGCCTACCAGCGCTGGGAGGAGTCTCGTACGGA
ACGCCTCAGCAAGATCCAGAGCCTGCTCGACGCCCAAAGCAGAGCCTCTG
ACAGTGACAATGAAGATGATAATACCGCCTCCGACCGCTCGGATATCTCG
CCGGACGAGAATGCGAAGCCCGCCCTGACCGGAGTGTTGGCCCAGAGCAC
CGAGATTGCCGCCAGCGTTCCTCGTGGCTGGAACTGGAGCACCTTCTAAA
TGGCTACCCACGTTGTGACTGCGACTACTACTGCCCCTGCTTTCACTGGC
AAGCAAATCTCCGTCTACGGTCACCCTTCTCCTGTCAACTCGGCCGAGAC
CTCTCCCGCAAATAACTCTCCTACTTCTCCTCGCTATCAGCACTTGCCGC
TTCAGTCGAAGCAACTCCGTCCCCTCAAGGGTCCTCTCTACGTTCCTGCT
GCCTTGCGCCCCACTGAGCGTCCCCAGAAGGCCTCTTCTCCCCCGACTCC
TCCCCGCAGCGTTCACGGTTCTCACGGCTCTCTCGACAGCCTGAACGAGG
GCGAAGTTGGTGCACCTGTTACTCGTCGTTCGACCATGGAGAGCTACAAC
AGCGGTCCTGCTGTCAGCAAGCTGGCAGAGGATGAATGGATGAAGAATGA
GCACCTGGGCGAGGTCACTGGTCTTCCCACTCGTGATCACTGGAAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000778CBS51388_000778Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000778-T1CBS51388_000778-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000778-T1.cdsCBS51388_000778-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000778-T1.exon2CBS51388_000778-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000778-T1.exon1CBS51388_000778-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR011011
DBxrefInterPro:IPR017455
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR000306
DBxrefPFAM:PF01363
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2308994..2310069 -
Powered by Drupal