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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2323797..2325674- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000780-T1 ID=CBS51388_000780-T1|Name=CBS51388_000780-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1878bp|location=Sequence derived from alignment at An01:2323797..2325674- (Aspergillus niger CBS 513.88)
ATGAACACAATGTGTACTACAAATACTACTATCACCCATCCCTCCAAATC
CCGTCCTATCGTCATCATTGGCGCGGGCATTCTAGGTCGCCGCATCGCCG
CCGTCTTCTCATCTGCCGGCTATAGCGTGCACATCAGCGATCCATCGCCC
TCTGCCCTTGACTCTGCGAGAACTTACATCTCGACGCACATCCACGAATT
CACTACCCATATCCCTCGTCCTTCTTTATCTCCGGGCCCAATCTCAACCT
TTACCTCCGTCCCCGAAGCAGTCGCCACAGCCTGGCTCATCGTCGAAGCC
GTTCCTGAGATCCTGCCCATAAAGCAATCCCTCTTCGCAGACCTCCACGC
CCACAGTCCAGCGGACTGCATCCTTGCATCGAACAGCAGCAGTTACAAAT
CCCGTCTTATAGGCGGTCATCTACCACTGCCACGACGGGTCCTTCTTCTC
AACATGCATTTCACTATGCCACCGGCTATCCGTACCGTGGAGCTAATGAC
CTGCGGGGATACGCACGAGCGGGTATTCCCCATGCTCAGTGGGGTGTTGA
GTGAATGTGGAGTTATCCCCGTGACGGCACGGAAAGAGTCCACGGGGTTT
ATCTTCAATCGTCTCTGGGCGGCGATTAAGCGTGAGATACTGATGATTCT
GGCGGAGGGAGTGAGTGAGCCAGCGGAGATTGATCTGTTGTGGAGGGAGA
TGTTCGGTAGGAAGGAGAGTTTGCCGCCGTGTCGGTTGATGGATGCAGTT
GGGCTGGATACGGTGGCTGATATTGAGGAGAATTATGTGCGGGAGAGAAG
ACTGGATGGACAGTTGACGGTGGATTGGGTGAGGGAGAGGTTTGTGAGTG
TTGGGAAGGTCGGGAGGAAGGCTGAGGGATTGGGAGGGTTGTATCCTCCT
GACTCTACTGAGGACGTGAATGGGAAGACGGAGGGAAAAGGGCCTCTGCT
CTATCTTCTTGATGTTGGGTTGGGAGCAAATACACCTGATATCGAGAAGG
TTTCTACCGCTGGGAGGATACTGAAGTTCCAGCCGGGCACCACTGGCATG
CCCGTCCCCATTATCACAGGCCAGTCTCTCCCCGATGGGATTGACGTGTC
TCAGACGATAGGACGCATCTTCTGGACCAATATGGGGCAGTCGACATCCA
CGCACGACGGATCCGTGCACTCGGCGACACTAGATGGCCAGGATATATGC
ACTTTACTTCCAGCTGGGGCGGTGCATACGCCAAAGCAGCTTGTTGTCGA
CGACACAACGCAGCATGTGTATTTCTGTGATCGCGAAGGGATGAGCGTGC
ATCGGGTGAGGTTTGACGGCACCAGTCATGAGGTTTTGGTACAGACAGGA
GCACTTGATAACACCGCCCACCGCCGGGATATGACACGGTGGTGTGTGGG
AATTGCATTGGACCGGAAGAACGGACATGTGTATTGGACGCAGAAGGGGC
CGAGTAAAGGTGGGCAGGGGCAGATATTCCGTGCTGGTTTGGACGTGCCG
GCTGGGCAGACGGTGGATAGTCGAGAGGATGTTGAATTGGTGTTGGAGGG
ATTGCCGGAGCCGATTGATCTGGAGTTTGACGAGGAGGATGTGATGCTGT
ATTGGACCGATCGGGGGGAGCATCCGTGGGGTTGCTCATTGAATAGGGTC
AAGGTTGTTGGCGGTAAGGTGGTGGTGAAGTCGAGGGAGATTCTGGCAAG
GCATTTTAATGAGCCTATTGGGTTGAAGGTGGATAGGAAGGGAAGAAAGG
TGTATGTTGCTGATCTGGGAGGGAGTATGTATTGTGTTGATTTGCAGAAT
GGGGAGAAGAAGGTGATGTGGAGAGATGAGGGGTGTTATACTGGGGTTGC
GTTGGTTAGTGCAGCAGAGAGGGAGTAG back to topCoding sequence (CDS) from alignment at An01:2323797..2325674- >CBS51388_000780-T1 ID=CBS51388_000780-T1|Name=CBS51388_000780-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1878bp|location=Sequence derived from alignment at An01:2323797..2325674- (Aspergillus niger CBS 513.88)
ATGAACACAATGTGTACTACAAATACTACTATCACCCATCCCTCCAAATC
CCGTCCTATCGTCATCATTGGCGCGGGCATTCTAGGTCGCCGCATCGCCG
CCGTCTTCTCATCTGCCGGCTATAGCGTGCACATCAGCGATCCATCGCCC
TCTGCCCTTGACTCTGCGAGAACTTACATCTCGACGCACATCCACGAATT
CACTACCCATATCCCTCGTCCTTCTTTATCTCCGGGCCCAATCTCAACCT
TTACCTCCGTCCCCGAAGCAGTCGCCACAGCCTGGCTCATCGTCGAAGCC
GTTCCTGAGATCCTGCCCATAAAGCAATCCCTCTTCGCAGACCTCCACGC
CCACAGTCCAGCGGACTGCATCCTTGCATCGAACAGCAGCAGTTACAAAT
CCCGTCTTATAGGCGGTCATCTACCACTGCCACGACGGGTCCTTCTTCTC
AACATGCATTTCACTATGCCACCGGCTATCCGTACCGTGGAGCTAATGAC
CTGCGGGGATACGCACGAGCGGGTATTCCCCATGCTCAGTGGGGTGTTGA
GTGAATGTGGAGTTATCCCCGTGACGGCACGGAAAGAGTCCACGGGGTTT
ATCTTCAATCGTCTCTGGGCGGCGATTAAGCGTGAGATACTGATGATTCT
GGCGGAGGGAGTGAGTGAGCCAGCGGAGATTGATCTGTTGTGGAGGGAGA
TGTTCGGTAGGAAGGAGAGTTTGCCGCCGTGTCGGTTGATGGATGCAGTT
GGGCTGGATACGGTGGCTGATATTGAGGAGAATTATGTGCGGGAGAGAAG
ACTGGATGGACAGTTGACGGTGGATTGGGTGAGGGAGAGGTTTGTGAGTG
TTGGGAAGGTCGGGAGGAAGGCTGAGGGATTGGGAGGGTTGTATCCTCCT
GACTCTACTGAGGACGTGAATGGGAAGACGGAGGGAAAAGGGCCTCTGCT
CTATCTTCTTGATGTTGGGTTGGGAGCAAATACACCTGATATCGAGAAGG
TTTCTACCGCTGGGAGGATACTGAAGTTCCAGCCGGGCACCACTGGCATG
CCCGTCCCCATTATCACAGGCCAGTCTCTCCCCGATGGGATTGACGTGTC
TCAGACGATAGGACGCATCTTCTGGACCAATATGGGGCAGTCGACATCCA
CGCACGACGGATCCGTGCACTCGGCGACACTAGATGGCCAGGATATATGC
ACTTTACTTCCAGCTGGGGCGGTGCATACGCCAAAGCAGCTTGTTGTCGA
CGACACAACGCAGCATGTGTATTTCTGTGATCGCGAAGGGATGAGCGTGC
ATCGGGTGAGGTTTGACGGCACCAGTCATGAGGTTTTGGTACAGACAGGA
GCACTTGATAACACCGCCCACCGCCGGGATATGACACGGTGGTGTGTGGG
AATTGCATTGGACCGGAAGAACGGACATGTGTATTGGACGCAGAAGGGGC
CGAGTAAAGGTGGGCAGGGGCAGATATTCCGTGCTGGTTTGGACGTGCCG
GCTGGGCAGACGGTGGATAGTCGAGAGGATGTTGAATTGGTGTTGGAGGG
ATTGCCGGAGCCGATTGATCTGGAGTTTGACGAGGAGGATGTGATGCTGT
ATTGGACCGATCGGGGGGAGCATCCGTGGGGTTGCTCATTGAATAGGGTC
AAGGTTGTTGGCGGTAAGGTGGTGGTGAAGTCGAGGGAGATTCTGGCAAG
GCATTTTAATGAGCCTATTGGGTTGAAGGTGGATAGGAAGGGAAGAAAGG
TGTATGTTGCTGATCTGGGAGGGAGTATGTATTGTGTTGATTTGCAGAAT
GGGGAGAAGAAGGTGATGTGGAGAGATGAGGGGTGTTATACTGGGGTTGC
GTTGGTTAGTGCAGCAGAGAGGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006631 | fatty acid metabolic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR006176 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR000033 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2323797..2325674 - |
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